RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 SUSD2Q9UGT4 822 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 FHOD1Q9Y613 1164 aa2.35□□□□□ -2.03
PRPF39-208ENST00000554785 IRS4O14654 1257 aaPredicted RBP2.34□□□□□ -2.03
PRPF39-208ENST00000554785 N4BP3O15049 544 aa2.34□□□□□ -2.03
PRPF39-208ENST00000554785 TRIM13O60858 407 aa2.34□□□□□ -2.03
PRPF39-208ENST00000554785 STK10O94804 968 aaKnown RBP2.34□□□□□ -2.03
PRPF39-208ENST00000554785 CELA3BP08861 270 aa2.34□□□□□ -2.03
PRPF39-208ENST00000554785 BMP7P18075 431 aa2.34□□□□□ -2.03
PRPF39-208ENST00000554785 TACR1P25103 407 aa2.34□□□□□ -2.03
PRPF39-208ENST00000554785 EIF6P56537 245 aaKnown RBP2.34□□□□□ -2.03
PRPF39-208ENST00000554785 RAB3GAP1Q15042 981 aa2.34□□□□□ -2.03
PRPF39-208ENST00000554785 GNPTABQ3T906 1256 aa2.34□□□□□ -2.03
PRPF39-208ENST00000554785 TMC6Q7Z403 805 aa2.34□□□□□ -2.03
PRPF39-208ENST00000554785 LDHDQ86WU2 507 aa2.34□□□□□ -2.03
PRPF39-208ENST00000554785 ZNF513Q8N8E2 541 aaPredicted RBP2.34□□□□□ -2.03
PRPF39-208ENST00000554785 MARCH10Q8NA82 808 aaPredicted RBP2.34□□□□□ -2.03
PRPF39-208ENST00000554785 DACT3Q96B18 629 aaPredicted RBP2.34□□□□□ -2.03
PRPF39-208ENST00000554785 ARMC5Q96C12 935 aa2.34□□□□□ -2.03
PRPF39-208ENST00000554785 CRBNQ96SW2 442 aa2.34□□□□□ -2.03
PRPF39-208ENST00000554785 KLHL25Q9H0H3 589 aa2.34□□□□□ -2.03
PRPF39-208ENST00000554785 RXFP1Q9HBX9 757 aa2.34□□□□□ -2.03
PRPF39-208ENST00000554785 SIRT5Q9NXA8 310 aa2.34□□□□□ -2.03
PRPF39-208ENST00000554785 PCDHA5Q9Y5H7 936 aa2.34□□□□□ -2.03
PRPF39-208ENST00000554785 MRVI1Q9Y6F6 885 aa2.34□□□□□ -2.03
PRPF39-208ENST00000554785 MYO15BQ96JP2 1530 aa2.34□□□□□ -2.04
PRPF39-208ENST00000554785 STXBP3O00186 592 aa2.33□□□□□ -2.04
PRPF39-208ENST00000554785 MPOP05164 745 aa2.33□□□□□ -2.04
PRPF39-208ENST00000554785 CD3EP07766 207 aa2.33□□□□□ -2.04
PRPF39-208ENST00000554785 ZNF200P98182 395 aaPredicted RBP2.33□□□□□ -2.04
PRPF39-208ENST00000554785 DPY19L1Q2PZI1 675 aa2.33□□□□□ -2.04
PRPF39-208ENST00000554785 CWF19L1Q69YN2 538 aaKnown RBP2.33□□□□□ -2.04
PRPF39-208ENST00000554785 PRRT2Q7Z6L0 340 aaPredicted RBP2.33□□□□□ -2.04
PRPF39-208ENST00000554785 SP8Q8IXZ3 490 aa2.33□□□□□ -2.04
PRPF39-208ENST00000554785 OR6P1Q8NGX9 317 aa2.33□□□□□ -2.04
PRPF39-208ENST00000554785 MZB1Q8WU39 189 aa2.33□□□□□ -2.04
PRPF39-208ENST00000554785 ANAPC16Q96DE5 110 aa2.33□□□□□ -2.04
PRPF39-208ENST00000554785 SIGLEC10Q96LC7 697 aa2.33□□□□□ -2.04
PRPF39-208ENST00000554785 HIRIP3Q9BW71 556 aaPredicted RBP2.33□□□□□ -2.04
PRPF39-208ENST00000554785 ZNF408Q9H9D4 720 aa2.33□□□□□ -2.04
PRPF39-208ENST00000554785 APEX2Q9UBZ4 518 aa2.33□□□□□ -2.04
PRPF39-208ENST00000554785 IRAK3Q9Y616 596 aa2.33□□□□□ -2.04
PRPF39-208ENST00000554785 A0A0G2JLL6 359 aaPredicted RBP2.33□□□□□ -2.04
PRPF39-208ENST00000554785 DBHP09172 617 aa2.33□□□□□ -2.04
PRPF39-208ENST00000554785 FBLN1P23142 703 aa2.33□□□□□ -2.04
PRPF39-208ENST00000554785 ETFBP38117 255 aa2.33□□□□□ -2.04
PRPF39-208ENST00000554785 RBL2Q08999 1139 aa2.33□□□□□ -2.04
PRPF39-208ENST00000554785 CBX2Q14781 532 aaPredicted RBP2.33□□□□□ -2.04
PRPF39-208ENST00000554785 PPP2R5EQ16537 467 aa2.33□□□□□ -2.04
PRPF39-208ENST00000554785 PLEKHN1Q494U1 663 aaPredicted RBP2.33□□□□□ -2.04
PRPF39-208ENST00000554785 SOGA3Q5TF21 947 aa2.33□□□□□ -2.04
PRPF39-208ENST00000554785 OLFML2BQ68BL8 750 aa2.33□□□□□ -2.04
PRPF39-208ENST00000554785 FAM129CQ86XR2 697 aa2.33□□□□□ -2.04
PRPF39-208ENST00000554785 NAT16Q8N8M0 369 aa2.33□□□□□ -2.04
PRPF39-208ENST00000554785 SYT8Q8NBV8 401 aa2.33□□□□□ -2.04
PRPF39-208ENST00000554785 SMARCC1Q92922 1105 aaPredicted RBP2.33□□□□□ -2.04
PRPF39-208ENST00000554785 PTCHD1Q96NR3 888 aa2.33□□□□□ -2.04
PRPF39-208ENST00000554785 DNAJC2Q99543 621 aaKnown RBP2.33□□□□□ -2.04
PRPF39-208ENST00000554785 BCAS3Q9H6U6 928 aa2.33□□□□□ -2.04
PRPF39-208ENST00000554785 MYRFQ9Y2G1 1151 aa2.33□□□□□ -2.04
PRPF39-208ENST00000554785 ARHGEF11O15085 1522 aa2.33□□□□□ -2.04
PRPF39-208ENST00000554785 AURKAO14965 403 aa2.32□□□□□ -2.04
PRPF39-208ENST00000554785 ITGA4P13612 1032 aa2.32□□□□□ -2.04
PRPF39-208ENST00000554785 ATF2P15336 505 aa2.32□□□□□ -2.04
PRPF39-208ENST00000554785 IGFBP6P24592 240 aaPredicted RBP2.32□□□□□ -2.04
PRPF39-208ENST00000554785 ARL4AP40617 200 aa2.32□□□□□ -2.04
PRPF39-208ENST00000554785 MC3RP41968 323 aa2.32□□□□□ -2.04
PRPF39-208ENST00000554785 LIMS1P48059 325 aa2.32□□□□□ -2.04
PRPF39-208ENST00000554785 CYP4F3Q08477 520 aa2.32□□□□□ -2.04
PRPF39-208ENST00000554785 ZXDCQ2QGD7 858 aaPredicted RBP2.32□□□□□ -2.04
PRPF39-208ENST00000554785 HLA-DQA1Q5Y7H0 255 aa2.32□□□□□ -2.04
PRPF39-208ENST00000554785 MBLAC2Q68D91 279 aa2.32□□□□□ -2.04
PRPF39-208ENST00000554785 HEATR6Q6AI08 1181 aaKnown RBP2.32□□□□□ -2.04
PRPF39-208ENST00000554785 ANKS3Q6ZW76 656 aa2.32□□□□□ -2.04
PRPF39-208ENST00000554785 ADAT2Q7Z6V5 191 aaKnown RBP2.32□□□□□ -2.04
PRPF39-208ENST00000554785 CPNE8Q86YQ8 564 aa2.32□□□□□ -2.04
PRPF39-208ENST00000554785 JAMLQ86YT9 394 aa2.32□□□□□ -2.04
PRPF39-208ENST00000554785 CKAP2LQ8IYA6 745 aa2.32□□□□□ -2.04
PRPF39-208ENST00000554785 ADGRG2Q8IZP9 1017 aa2.32□□□□□ -2.04
PRPF39-208ENST00000554785 TEPSINQ96N21 525 aa2.32□□□□□ -2.04
PRPF39-208ENST00000554785 XYLT2Q9H1B5 865 aa2.32□□□□□ -2.04
PRPF39-208ENST00000554785 GPRC5CQ9NQ84 441 aa2.32□□□□□ -2.04
PRPF39-208ENST00000554785 CGGBP1Q9UFW8 167 aaPredicted RBP2.32□□□□□ -2.04
PRPF39-208ENST00000554785 PRKAG3Q9UGI9 489 aa2.32□□□□□ -2.04
PRPF39-208ENST00000554785 R3HCC1Q9Y3T6 440 aaKnown RBP2.32□□□□□ -2.04
PRPF39-208ENST00000554785 IRS2Q9Y4H2 1338 aa2.32□□□□□ -2.04
PRPF39-208ENST00000554785 A0A087WZG4 1122 aa2.32□□□□□ -2.04
PRPF39-208ENST00000554785 ZC3H12DA2A288 527 aaKnown RBP2.32□□□□□ -2.04
PRPF39-208ENST00000554785 OTOL1A6NHN0 477 aaPredicted RBP2.32□□□□□ -2.04
PRPF39-208ENST00000554785 ARNTLO00327 626 aa2.32□□□□□ -2.04
PRPF39-208ENST00000554785 SMAD7O15105 426 aaKnown RBP2.32□□□□□ -2.04
PRPF39-208ENST00000554785 BUB1BO60566 1050 aaPredicted RBP2.32□□□□□ -2.04
PRPF39-208ENST00000554785 L1CAMP32004 1257 aa2.32□□□□□ -2.04
PRPF39-208ENST00000554785 NOP2P46087 812 aaKnown RBP2.32□□□□□ -2.04
PRPF39-208ENST00000554785 AFF3P51826 1226 aaKnown RBP2.32□□□□□ -2.04
PRPF39-208ENST00000554785 CASP7P55210 303 aa2.32□□□□□ -2.04
PRPF39-208ENST00000554785 PRR5P85299 388 aa2.32□□□□□ -2.04
PRPF39-208ENST00000554785 SLC7A5Q01650 507 aa2.32□□□□□ -2.04
PRPF39-208ENST00000554785 POU4F1Q01851 419 aa2.32□□□□□ -2.04
PRPF39-208ENST00000554785 LAPTM5Q13571 262 aa2.32□□□□□ -2.04
PRPF39-208ENST00000554785 TCEAL1Q15170 157 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms