RNA–Protein interactions for RNA: ENST00000554774.1

XRCC3-207, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 510 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-207ENST00000554774 NMIQ13287 307 aaPredicted RBP16.5■□□□□ 0.23
XRCC3-207ENST00000554774 ZNF589Q86UQ0 364 aaPredicted RBP16.5■□□□□ 0.23
XRCC3-207ENST00000554774 HERVK_113Q902F9 699 aa16.5■□□□□ 0.23
XRCC3-207ENST00000554774 GAS2L1Q99501 681 aaPredicted RBP16.5■□□□□ 0.23
XRCC3-207ENST00000554774 TCP11L1Q9NUJ3 509 aa16.5■□□□□ 0.23
XRCC3-207ENST00000554774 PDHBP11177 359 aa16.49■□□□□ 0.23
XRCC3-207ENST00000554774 CALML3P27482 149 aa16.49■□□□□ 0.23
XRCC3-207ENST00000554774 HDAC1Q13547 482 aaPredicted RBP16.49■□□□□ 0.23
XRCC3-207ENST00000554774 DUSP28Q4G0W2 176 aa16.49■□□□□ 0.23
XRCC3-207ENST00000554774 SLC30A10Q6XR72 485 aa16.49■□□□□ 0.23
XRCC3-207ENST00000554774 USP38Q8NB14 1042 aa16.49■□□□□ 0.23
XRCC3-207ENST00000554774 RILPL2Q969X0 211 aa16.49■□□□□ 0.23
XRCC3-207ENST00000554774 NOC4LQ9BVI4 516 aaKnown RBP16.49■□□□□ 0.23
XRCC3-207ENST00000554774 WDR11Q9BZH6 1224 aa16.49■□□□□ 0.23
XRCC3-207ENST00000554774 MTIF3Q9H2K0 278 aaKnown RBP16.49■□□□□ 0.23
XRCC3-207ENST00000554774 CXXC1Q9P0U4 656 aaPredicted RBP16.49■□□□□ 0.23
XRCC3-207ENST00000554774 MSRAQ9UJ68 235 aa16.49■□□□□ 0.23
XRCC3-207ENST00000554774 ZMYM6O95789 1325 aa16.48■□□□□ 0.23
XRCC3-207ENST00000554774 MYL3P08590 195 aa16.48■□□□□ 0.23
XRCC3-207ENST00000554774 RNF207Q6ZRF8 634 aa16.48■□□□□ 0.23
XRCC3-207ENST00000554774 MFSD6Q6ZSS7 791 aa16.48■□□□□ 0.23
XRCC3-207ENST00000554774 OTOP2Q7RTS6 562 aa16.48■□□□□ 0.23
XRCC3-207ENST00000554774 PPM1EQ8WY54 764 aa16.48■□□□□ 0.23
XRCC3-207ENST00000554774 LNPKQ9C0E8 428 aa16.48■□□□□ 0.23
XRCC3-207ENST00000554774 PRDM12Q9H4Q4 367 aa16.48■□□□□ 0.23
XRCC3-207ENST00000554774 POLR3EQ9NVU0 708 aa16.48■□□□□ 0.23
XRCC3-207ENST00000554774 GBF1Q92538 1859 aa16.48■□□□□ 0.23
XRCC3-207ENST00000554774 CCDC171Q6TFL3 1326 aa16.47■□□□□ 0.23
XRCC3-207ENST00000554774 MYO9BQ13459 2157 aa16.47■□□□□ 0.23
XRCC3-207ENST00000554774 LOC102724159A0A0B4J2E5 919 aa16.47■□□□□ 0.23
XRCC3-207ENST00000554774 CPT1AP50416 773 aa16.47■□□□□ 0.23
XRCC3-207ENST00000554774 ZNF543Q08ER8 600 aa16.47■□□□□ 0.23
XRCC3-207ENST00000554774 PWP2Q15269 919 aaKnown RBP16.47■□□□□ 0.23
XRCC3-207ENST00000554774 RAB30Q15771 203 aa16.47■□□□□ 0.23
XRCC3-207ENST00000554774 AKNAD1Q5T1N1 836 aa16.47■□□□□ 0.23
XRCC3-207ENST00000554774 TICAM2Q86XR7 235 aa16.47■□□□□ 0.23
XRCC3-207ENST00000554774 RPUSD2Q8IZ73 545 aaKnown RBP16.47■□□□□ 0.23
XRCC3-207ENST00000554774 OR6J1Q8NGC5 347 aa16.47■□□□□ 0.23
XRCC3-207ENST00000554774 CLEC4DQ8WXI8 215 aa16.47■□□□□ 0.23
XRCC3-207ENST00000554774 SYMPKQ92797 1274 aaKnown RBP16.47■□□□□ 0.23
XRCC3-207ENST00000554774 TTC14Q96N46 770 aa16.47■□□□□ 0.23
XRCC3-207ENST00000554774 MPHOSPH6Q99547 160 aaKnown RBP16.47■□□□□ 0.23
XRCC3-207ENST00000554774 WNT8AQ9H1J5 351 aa16.47■□□□□ 0.23
XRCC3-207ENST00000554774 ALDH8A1Q9H2A2 487 aaPredicted RBP16.47■□□□□ 0.23
XRCC3-207ENST00000554774 NKX2-4Q9H2Z4 354 aa16.47■□□□□ 0.23
XRCC3-207ENST00000554774 PNMA2Q9UL42 364 aa16.47■□□□□ 0.23
XRCC3-207ENST00000554774 CHD7Q9P2D1 2997 aa16.47■□□□□ 0.23
XRCC3-207ENST00000554774 RBM47A0AV96 593 aaKnown RBP16.46■□□□□ 0.23
XRCC3-207ENST00000554774 PDE4DQ08499 809 aa16.46■□□□□ 0.23
XRCC3-207ENST00000554774 TBC1D10CQ8IV04 446 aa16.46■□□□□ 0.23
XRCC3-207ENST00000554774 SCLYQ96I15 445 aa16.46■□□□□ 0.23
XRCC3-207ENST00000554774 ZKSCAN3Q9BRR0 538 aa16.46■□□□□ 0.23
XRCC3-207ENST00000554774 RNF41Q9H4P4 317 aaPredicted RBP16.46■□□□□ 0.23
XRCC3-207ENST00000554774 GPHNQ9NQX3 736 aaPredicted RBP16.46■□□□□ 0.23
XRCC3-207ENST00000554774 TRMT13Q9NUP7 481 aaKnown RBP16.46■□□□□ 0.23
XRCC3-207ENST00000554774 ZBBXA8MT70 800 aa16.45■□□□□ 0.22
XRCC3-207ENST00000554774 SUPT20HL2P0C7V6 817 aa16.45■□□□□ 0.22
XRCC3-207ENST00000554774 GOLGA8HP0CJ92 632 aa16.45■□□□□ 0.22
XRCC3-207ENST00000554774 SNHG28P0DPA3 235 aa16.45■□□□□ 0.22
XRCC3-207ENST00000554774 PCP11498 1178 aaKnown RBP16.45■□□□□ 0.22
XRCC3-207ENST00000554774 CYP2C9P11712 490 aa16.45■□□□□ 0.22
XRCC3-207ENST00000554774 MFAP1P55081 439 aaKnown RBP16.45■□□□□ 0.22
XRCC3-207ENST00000554774 RPS6P62753 249 aaKnown RBP16.45■□□□□ 0.22
XRCC3-207ENST00000554774 PURAQ00577 322 aaKnown RBP16.45■□□□□ 0.22
XRCC3-207ENST00000554774 PPP2R5BQ15173 497 aa16.45■□□□□ 0.22
XRCC3-207ENST00000554774 USH1GQ495M9 461 aa16.45■□□□□ 0.22
XRCC3-207ENST00000554774 BRDTQ58F21 947 aaPredicted RBP16.45■□□□□ 0.22
XRCC3-207ENST00000554774 B4GALNT3Q6L9W6 998 aa16.45■□□□□ 0.22
XRCC3-207ENST00000554774 ESR2Q92731 530 aa16.45■□□□□ 0.22
XRCC3-207ENST00000554774 MTG1Q9BT17 334 aaPredicted RBP16.45■□□□□ 0.22
XRCC3-207ENST00000554774 SLC28A3Q9HAS3 691 aa16.45■□□□□ 0.22
XRCC3-207ENST00000554774 PRDM6Q9NQX0 595 aa16.45■□□□□ 0.22
XRCC3-207ENST00000554774 YBX2Q9Y2T7 364 aaKnown RBP16.45■□□□□ 0.22
XRCC3-207ENST00000554774 SLC4A7Q9Y6M7 1214 aa16.45■□□□□ 0.22
XRCC3-207ENST00000554774 TNKSO95271 1327 aa16.45■□□□□ 0.22
XRCC3-207ENST00000554774 NEDD4P46934 1319 aa16.45■□□□□ 0.22
XRCC3-207ENST00000554774 WDR19Q8NEZ3 1342 aa16.45■□□□□ 0.22
XRCC3-207ENST00000554774 SDSP20132 328 aa16.44■□□□□ 0.22
XRCC3-207ENST00000554774 IGFBP4P22692 258 aa16.44■□□□□ 0.22
XRCC3-207ENST00000554774 FAM47CQ5HY64 1035 aa16.44■□□□□ 0.22
XRCC3-207ENST00000554774 TJAP1Q5JTD0 557 aa16.44■□□□□ 0.22
XRCC3-207ENST00000554774 COPS5Q92905 334 aa16.44■□□□□ 0.22
XRCC3-207ENST00000554774 UBA5Q9GZZ9 404 aa16.44■□□□□ 0.22
XRCC3-207ENST00000554774 CPVLQ9H3G5 476 aa16.44■□□□□ 0.22
XRCC3-207ENST00000554774 RAD50Q92878 1312 aa16.44■□□□□ 0.22
XRCC3-207ENST00000554774 B4DLN1 442 aa16.43■□□□□ 0.22
XRCC3-207ENST00000554774 ZNF213O14771 459 aa16.43■□□□□ 0.22
XRCC3-207ENST00000554774 NKRFO15226 690 aaKnown RBP eCLIP16.43■□□□□ 0.22
XRCC3-207ENST00000554774 EDNRBP24530 442 aa16.43■□□□□ 0.22
XRCC3-207ENST00000554774 MRPL12P52815 198 aaKnown RBP16.43■□□□□ 0.22
XRCC3-207ENST00000554774 RABGGTBP53611 331 aa16.43■□□□□ 0.22
XRCC3-207ENST00000554774 NBPF20Q3BBV1 942 aa16.43■□□□□ 0.22
XRCC3-207ENST00000554774 GPATCH4Q5T3I0 446 aaKnown RBP16.43■□□□□ 0.22
XRCC3-207ENST00000554774 DEFB128Q7Z7B8 93 aa16.43■□□□□ 0.22
XRCC3-207ENST00000554774 DNERQ8NFT8 737 aa16.43■□□□□ 0.22
XRCC3-207ENST00000554774 SCFD2Q8WU76 684 aa16.43■□□□□ 0.22
XRCC3-207ENST00000554774 PPP1R13LQ8WUF5 828 aa16.43■□□□□ 0.22
XRCC3-207ENST00000554774 SCN5AQ14524 2016 aa16.42■□□□□ 0.22
XRCC3-207ENST00000554774 TXNP10599 105 aaKnown RBP16.42■□□□□ 0.22
XRCC3-207ENST00000554774 ADGRE1Q14246 886 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms