RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 SEMA3EO15041 775 aa15.24■□□□□ 0.03
VTI1B-204ENST00000554659 SUN1O94901 812 aa15.24■□□□□ 0.03
VTI1B-204ENST00000554659 GOLGA8HP0CJ92 632 aa15.24■□□□□ 0.03
VTI1B-204ENST00000554659 CLCN6P51797 869 aa15.24■□□□□ 0.03
VTI1B-204ENST00000554659 NECTIN1Q15223 517 aa15.24■□□□□ 0.03
VTI1B-204ENST00000554659 FAM102BQ5T8I3 360 aa15.24■□□□□ 0.03
VTI1B-204ENST00000554659 CCDC197Q8NCU1 140 aa15.24■□□□□ 0.03
VTI1B-204ENST00000554659 PARD6BQ9BYG5 372 aa15.24■□□□□ 0.03
VTI1B-204ENST00000554659 HEXIM1O94992 359 aaKnown RBP15.24■□□□□ 0.03
VTI1B-204ENST00000554659 LUC7L3O95232 432 aaKnown RBP15.24■□□□□ 0.03
VTI1B-204ENST00000554659 LARGE1O95461 756 aa15.24■□□□□ 0.03
VTI1B-204ENST00000554659 AOC3Q16853 763 aa15.24■□□□□ 0.03
VTI1B-204ENST00000554659 KCTD16Q68DU8 428 aa15.24■□□□□ 0.03
VTI1B-204ENST00000554659 FTOQ9C0B1 505 aaKnown RBP eCLIP15.24■□□□□ 0.03
VTI1B-204ENST00000554659 GREM2Q9H772 168 aa15.24■□□□□ 0.03
VTI1B-204ENST00000554659 MRPL11Q9Y3B7 192 aaKnown RBP15.24■□□□□ 0.03
VTI1B-204ENST00000554659 SH2B2O14492 632 aaPredicted RBP15.24■□□□□ 0.03
VTI1B-204ENST00000554659 POLR2MP0CAP2 368 aa15.24■□□□□ 0.03
VTI1B-204ENST00000554659 IFNAR1P17181 557 aa15.24■□□□□ 0.03
VTI1B-204ENST00000554659 POLA2Q14181 598 aa15.24■□□□□ 0.03
VTI1B-204ENST00000554659 PTPROQ16827 1216 aa15.24■□□□□ 0.03
VTI1B-204ENST00000554659 RASIP1Q5U651 963 aa15.24■□□□□ 0.03
VTI1B-204ENST00000554659 AP1ARQ63HQ0 302 aa15.24■□□□□ 0.03
VTI1B-204ENST00000554659 BANK1Q8NDB2 785 aa15.24■□□□□ 0.03
VTI1B-204ENST00000554659 PUS3Q9BZE2 481 aaKnown RBP15.24■□□□□ 0.03
VTI1B-204ENST00000554659 FOSP01100 380 aaPredicted RBP15.23■□□□□ 0.03
VTI1B-204ENST00000554659 ADD2P35612 726 aa15.23■□□□□ 0.03
VTI1B-204ENST00000554659 FBXO11Q86XK2 927 aa15.23■□□□□ 0.03
VTI1B-204ENST00000554659 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.23■□□□□ 0.03
VTI1B-204ENST00000554659 SOS2Q07890 1332 aaPredicted RBP15.23■□□□□ 0.03
VTI1B-204ENST00000554659 STAM2O75886 525 aa15.23■□□□□ 0.03
VTI1B-204ENST00000554659 ARMC9Q7Z3E5 817 aa15.23■□□□□ 0.03
VTI1B-204ENST00000554659 HAUS1Q96CS2 278 aa15.23■□□□□ 0.03
VTI1B-204ENST00000554659 INTS9Q9NV88 658 aaKnown RBP15.23■□□□□ 0.03
VTI1B-204ENST00000554659 TEKT3Q9BXF9 490 aa15.23■□□□□ 0.03
VTI1B-204ENST00000554659 THAP9Q9H5L6 903 aa15.23■□□□□ 0.03
VTI1B-204ENST00000554659 SRPRBQ9Y5M8 271 aaKnown RBP15.23■□□□□ 0.03
VTI1B-204ENST00000554659 KAT6BQ8WYB5 2073 aa15.23■□□□□ 0.03
VTI1B-204ENST00000554659 POLD1P28340 1107 aa15.23■□□□□ 0.03
VTI1B-204ENST00000554659 VPS41P49754 854 aa15.23■□□□□ 0.03
VTI1B-204ENST00000554659 SLC12A2P55011 1212 aa15.23■□□□□ 0.03
VTI1B-204ENST00000554659 BRDTQ58F21 947 aaPredicted RBP15.23■□□□□ 0.03
VTI1B-204ENST00000554659 BSPRYQ5W0U4 402 aa15.23■□□□□ 0.03
VTI1B-204ENST00000554659 KRT26Q7Z3Y9 468 aa15.23■□□□□ 0.03
VTI1B-204ENST00000554659 CFAP61Q8NHU2 1237 aa15.23■□□□□ 0.03
VTI1B-204ENST00000554659 JRKLQ9Y4A0 524 aa15.23■□□□□ 0.03
VTI1B-204ENST00000554659 SOWAHDA6NJG2 315 aa15.22■□□□□ 0.03
VTI1B-204ENST00000554659 LIG4P49917 911 aa15.22■□□□□ 0.03
VTI1B-204ENST00000554659 GTF2IP78347 998 aa15.22■□□□□ 0.03
VTI1B-204ENST00000554659 ZBED6P86452 979 aa15.22■□□□□ 0.03
VTI1B-204ENST00000554659 LMNB2Q03252 620 aa15.22■□□□□ 0.03
VTI1B-204ENST00000554659 ADAT2Q7Z6V5 191 aaKnown RBP15.22■□□□□ 0.03
VTI1B-204ENST00000554659 LRRC47Q8N1G4 583 aaKnown RBP15.22■□□□□ 0.03
VTI1B-204ENST00000554659 CARD10Q9BWT7 1032 aa15.22■□□□□ 0.03
VTI1B-204ENST00000554659 SPZ1Q9BXG8 430 aa15.22■□□□□ 0.03
VTI1B-204ENST00000554659 EPB41L5Q9HCM4 733 aa15.22■□□□□ 0.03
VTI1B-204ENST00000554659 PRDM15P57071 1507 aaPredicted RBP15.22■□□□□ 0.03
VTI1B-204ENST00000554659 MBD5Q9P267 1494 aa15.22■□□□□ 0.03
VTI1B-204ENST00000554659 CPSF1Q10570 1443 aaKnown RBP15.22■□□□□ 0.03
VTI1B-204ENST00000554659 ATP2B4P23634 1241 aa15.22■□□□□ 0.03
VTI1B-204ENST00000554659 ARMCX5Q6P1M9 558 aa15.22■□□□□ 0.03
VTI1B-204ENST00000554659 LRRC43Q8N309 656 aa15.22■□□□□ 0.03
VTI1B-204ENST00000554659 PPM1KQ8N3J5 372 aa15.22■□□□□ 0.03
VTI1B-204ENST00000554659 PI4K2BQ8TCG2 481 aa15.22■□□□□ 0.03
VTI1B-204ENST00000554659 LRRC8CQ8TDW0 803 aa15.22■□□□□ 0.03
VTI1B-204ENST00000554659 STK17AQ9UEE5 414 aa15.22■□□□□ 0.03
VTI1B-204ENST00000554659 PGRMC1O00264 195 aaKnown RBP15.22■□□□□ 0.03
VTI1B-204ENST00000554659 GNPTABQ3T906 1256 aa15.22■□□□□ 0.03
VTI1B-204ENST00000554659 KSR1Q8IVT5 923 aa15.22■□□□□ 0.03
VTI1B-204ENST00000554659 SMYD4Q8IYR2 804 aaPredicted RBP15.22■□□□□ 0.03
VTI1B-204ENST00000554659 MIS12Q9H081 205 aa15.22■□□□□ 0.03
VTI1B-204ENST00000554659 A0A087WUV0 522 aaPredicted RBP15.22■□□□□ 0.03
VTI1B-204ENST00000554659 FRMD3A2A2Y4 597 aa15.22■□□□□ 0.03
VTI1B-204ENST00000554659 ECM2O94769 699 aaPredicted RBP15.22■□□□□ 0.03
VTI1B-204ENST00000554659 BTDP43251 543 aa15.22■□□□□ 0.03
VTI1B-204ENST00000554659 MYL7Q01449 175 aa15.22■□□□□ 0.03
VTI1B-204ENST00000554659 KRT81Q14533 505 aa15.22■□□□□ 0.03
VTI1B-204ENST00000554659 RPS6KA2Q15349 733 aa15.22■□□□□ 0.03
VTI1B-204ENST00000554659 ACRBPQ8NEB7 543 aa15.22■□□□□ 0.03
VTI1B-204ENST00000554659 FAF1Q9UNN5 650 aaPredicted RBP15.22■□□□□ 0.03
VTI1B-204ENST00000554659 hCG_1984214I3L0E3 225 aa15.21■□□□□ 0.03
VTI1B-204ENST00000554659 EVI5O60447 810 aa15.21■□□□□ 0.03
VTI1B-204ENST00000554659 ATF7P17544 494 aaPredicted RBP15.21■□□□□ 0.03
VTI1B-204ENST00000554659 ALDH1B1P30837 517 aa15.21■□□□□ 0.03
VTI1B-204ENST00000554659 IL9RQ01113 521 aa15.21■□□□□ 0.03
VTI1B-204ENST00000554659 ZNF713Q8N859 430 aaPredicted RBP15.21■□□□□ 0.03
VTI1B-204ENST00000554659 NSMCE1Q8WV22 266 aa15.21■□□□□ 0.03
VTI1B-204ENST00000554659 DACT3Q96B18 629 aaPredicted RBP15.21■□□□□ 0.03
VTI1B-204ENST00000554659 SAMSN1Q9NSI8 373 aaKnown RBP15.21■□□□□ 0.03
VTI1B-204ENST00000554659 HAUS2Q9NVX0 235 aa15.21■□□□□ 0.03
VTI1B-204ENST00000554659 KIAA1024Q9UPX6 916 aa15.21■□□□□ 0.03
VTI1B-204ENST00000554659 TTLL3Q9Y4R7 772 aa15.21■□□□□ 0.03
VTI1B-204ENST00000554659 CDK12Q9NYV4 1490 aaPredicted RBP15.21■□□□□ 0.03
VTI1B-204ENST00000554659 SPECC1L-ADORA2AF8WAN1 911 aa15.21■□□□□ 0.03
VTI1B-204ENST00000554659 NR2F2P24468 414 aa15.21■□□□□ 0.03
VTI1B-204ENST00000554659 NSFP46459 744 aaKnown RBP15.21■□□□□ 0.03
VTI1B-204ENST00000554659 FKBP3Q00688 224 aaKnown RBP15.21■□□□□ 0.03
VTI1B-204ENST00000554659 TTC19Q6DKK2 380 aaPredicted RBP15.21■□□□□ 0.03
VTI1B-204ENST00000554659 DAAM1Q9Y4D1 1078 aa15.21■□□□□ 0.03
VTI1B-204ENST00000554659 BFSP1Q12934 665 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms