RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 AKR1B15C9JRZ8 316 aaPredicted RBP3.89□□□□□ -1.79
SEC23A-207ENST00000554615 EIF3DO15371 548 aaKnown RBP eCLIP3.89□□□□□ -1.79
SEC23A-207ENST00000554615 BCRP11274 1271 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 GCFC2P16383 781 aaKnown RBP3.89□□□□□ -1.79
SEC23A-207ENST00000554615 PTPN7P35236 360 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 ZBED6P86452 979 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 WTAPQ15007 396 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 ISM2Q6H9L7 571 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 SUGP1Q8IWZ8 645 aaKnown RBP3.89□□□□□ -1.79
SEC23A-207ENST00000554615 SP8Q8IXZ3 490 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 IQCKQ8N0W5 287 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 C17orf53Q8N3J3 647 aaPredicted RBP3.89□□□□□ -1.79
SEC23A-207ENST00000554615 ACTRT1Q8TDG2 376 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 GMLQ99445 158 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 BAG1Q99933 345 aaPredicted RBP3.89□□□□□ -1.79
SEC23A-207ENST00000554615 POLR3CQ9BUI4 534 aaPredicted RBP3.89□□□□□ -1.79
SEC23A-207ENST00000554615 EPB41L4BQ9H329 900 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 HAUS4Q9H6D7 363 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.89□□□□□ -1.79
SEC23A-207ENST00000554615 TFIP11Q9UBB9 837 aaKnown RBP3.89□□□□□ -1.79
SEC23A-207ENST00000554615 ADAMTS5Q9UNA0 930 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 PLXNA4Q9HCM2 1894 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 OBSL1O75147 1896 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 MAGEB6P1A0A0J9YX57 407 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 GOLGA8AA7E2F4 631 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 H3BQF6 201 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 PLEKHA8P1O95397 391 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 RPN1P04843 607 aaKnown RBP3.89□□□□□ -1.79
SEC23A-207ENST00000554615 ATXN8OSP0DMR3 200 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 FNTAP49354 379 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 USP11P51784 963 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 PMS1P54277 932 aaKnown RBP3.89□□□□□ -1.79
SEC23A-207ENST00000554615 GUCY2DQ02846 1103 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 PTP4A2Q12974 167 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 KIF4BQ2VIQ3 1234 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 ERFEQ4G0M1 354 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 ASPRV1Q53RT3 343 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 TTC38Q5R3I4 469 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 MEI1Q5TIA1 1274 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 TBC1D9BQ66K14 1250 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 MFSD6Q6ZSS7 791 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 FAXDC2Q96IV6 333 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 ZNF830Q96NB3 372 aaPredicted RBP3.89□□□□□ -1.79
SEC23A-207ENST00000554615 CEP89Q96ST8 783 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 PNKPQ96T60 521 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 PDLIM7Q9NR12 457 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 OLFML3Q9NRN5 406 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 GTF2IRD1Q9UHL9 959 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 CASP8AP2Q9UKL3 1982 aa3.89□□□□□ -1.79
SEC23A-207ENST00000554615 A6NNZ2 444 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 PRKAB2O43741 272 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 ADRB2P07550 413 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 HSPA9P38646 679 aaKnown RBP3.88□□□□□ -1.79
SEC23A-207ENST00000554615 SLC18A1P54219 525 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 PPP2R3AQ06190 1150 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 DDR1Q08345 913 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 RBL2Q08999 1139 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 PPP2R5CQ13362 524 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 PLCB4Q15147 1175 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 CHRNA2Q15822 529 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 TUBB8Q3ZCM7 444 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 LACTB2Q53H82 288 aaPredicted RBP3.88□□□□□ -1.79
SEC23A-207ENST00000554615 CYP26C1Q6V0L0 522 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 USP49Q70CQ1 688 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 RPAINQ86UA6 219 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 CKAP2LQ8IYA6 745 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 BLIDQ8IZY5 108 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 MAGEB6Q8N7X4 407 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 WDR66Q8TBY9 1149 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 CABLES1Q8TDN4 633 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 JARID2Q92833 1246 aaPredicted RBP3.88□□□□□ -1.79
SEC23A-207ENST00000554615 CLIC6Q96NY7 704 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 MXD3Q9BW11 206 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 SIL1Q9H173 461 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 GLT8D2Q9H1C3 349 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 NUCKS1Q9H1E3 243 aaKnown RBP3.88□□□□□ -1.79
SEC23A-207ENST00000554615 NYAP2Q9P242 653 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 ANKFY1Q9P2R3 1169 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 ZNF652Q9Y2D9 606 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 VPS37CA5D8V6 355 aaPredicted RBP3.88□□□□□ -1.79
SEC23A-207ENST00000554615 TEX33O43247 280 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 TLR2O60603 784 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 STBD1O95210 358 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 IL1BP01584 269 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 IGHA2P01877 340 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 RFX1P22670 979 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 SHMT1P34896 483 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 DNM2P50570 870 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 CCNG1P51959 295 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 APBA1Q02410 837 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 TAZQ16635 292 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 TMEM67Q5HYA8 995 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 METTL24Q5JXM2 366 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 SWT1Q5T5J6 900 aaKnown RBP3.88□□□□□ -1.79
SEC23A-207ENST00000554615 SPTY2D1Q68D10 685 aaPredicted RBP3.88□□□□□ -1.79
SEC23A-207ENST00000554615 LDHAL6AQ6ZMR3 332 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 KRT25Q7Z3Z0 450 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 IRF2BP2Q7Z5L9 587 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 FAM71BQ8TC56 605 aa3.88□□□□□ -1.79
SEC23A-207ENST00000554615 DCAF4Q8WV16 495 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms