RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 ATP11BQ9Y2G3 1177 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 RASSF7Q02833 373 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 RWDD4Q6NW29 188 aaKnown RBP3.61□□□□□ -1.83
SYNE2-212ENST00000554584 BICC1Q9H694 974 aaKnown RBP3.61□□□□□ -1.83
SYNE2-212ENST00000554584 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.61□□□□□ -1.83
SYNE2-212ENST00000554584 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.61□□□□□ -1.83
SYNE2-212ENST00000554584 PTPRZ1P23471 2315 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-212ENST00000554584 B4DLN1 442 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 TBC1D8O95759 1140 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 UBXN1Q04323 297 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 KRT79Q5XKE5 535 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 TAS2R42Q7RTR8 314 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 LZICQ8WZA0 190 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 FAM136AQ96C01 138 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 HAUS2Q9NVX0 235 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 NKIRAS1Q9NYS0 192 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 AP2B1P63010 937 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 SEMA3AQ14563 771 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 MTHFSDQ2M296 383 aaKnown RBP3.61□□□□□ -1.83
SYNE2-212ENST00000554584 ZNF697Q5TEC3 545 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 DSTYKQ6XUX3 929 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 MCF2L2Q86YR7 1114 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 USP28Q96RU2 1077 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 CARD10Q9BWT7 1032 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 MBIPQ9NS73 344 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 PNMA8BQ9ULN7 279 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-212ENST00000554584 UACAQ9BZF9 1416 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 SPAG1Q07617 926 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 DEPTORQ8TB45 409 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 FHAD1B1AJZ9 1412 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 DDX3YO15523 660 aaKnown RBP3.61□□□□□ -1.83
SYNE2-212ENST00000554584 PARP1P09874 1014 aaKnown RBP3.61□□□□□ -1.83
SYNE2-212ENST00000554584 ZNF75DP51815 510 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 BRDTQ58F21 947 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-212ENST00000554584 KRT39Q6A163 491 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 INPP5DQ92835 1189 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 ZNF304Q9HCX3 659 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 CKAP4Q07065 602 aaKnown RBP3.61□□□□□ -1.83
SYNE2-212ENST00000554584 PTK2BQ14289 1009 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 AOC3Q16853 763 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 ERFEQ4G0M1 354 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 LLGL2Q6P1M3 1020 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 ANKRD13DQ6ZTN6 518 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 SLF2Q8IX21 1173 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 ARFGAP3Q9NP61 516 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 CACNA1BQ00975 2339 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 KCNA6P17658 529 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 PDE4DQ08499 809 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 ORC2Q13416 577 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-212ENST00000554584 SNW1Q13573 536 aaKnown RBP3.61□□□□□ -1.83
SYNE2-212ENST00000554584 CARTPTQ16568 116 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 CDO1Q16878 200 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 KRBA2Q6ZNG9 492 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 THNSL1Q8IYQ7 743 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 V9GYQ6 96 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 IL2RBP14784 551 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 TMOD1P28289 359 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 BTKQ06187 659 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 IDI1Q13907 227 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 NEDD9Q14511 834 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 TAF11Q15544 211 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 KCNV2Q8TDN2 545 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 ANKRD49Q8WVL7 239 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 FAM227BQ96M60 508 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 ANKRD30BQ9BXX2 1392 aa3.61□□□□□ -1.83
SYNE2-212ENST00000554584 BAZ1AQ9NRL2 1556 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-212ENST00000554584 ZBTB43O43298 467 aa3.6□□□□□ -1.83
SYNE2-212ENST00000554584 SPOPLQ6IQ16 392 aa3.6□□□□□ -1.83
SYNE2-212ENST00000554584 MAGED4Q96JG8 741 aa3.6□□□□□ -1.83
SYNE2-212ENST00000554584 COPRSQ9NQ92 184 aa3.6□□□□□ -1.83
SYNE2-212ENST00000554584 USP17L8P0C7I0 530 aa3.6□□□□□ -1.83
SYNE2-212ENST00000554584 KRT2P35908 639 aa3.6□□□□□ -1.83
SYNE2-212ENST00000554584 COG7P83436 770 aa3.6□□□□□ -1.83
SYNE2-212ENST00000554584 CALCOCO2Q13137 446 aa3.6□□□□□ -1.83
SYNE2-212ENST00000554584 MXD4Q14582 209 aaPredicted RBP3.6□□□□□ -1.83
SYNE2-212ENST00000554584 ARHGEF17Q96PE2 2063 aaPredicted RBP3.6□□□□□ -1.83
SYNE2-212ENST00000554584 KIF21BO75037 1637 aa3.6□□□□□ -1.83
SYNE2-212ENST00000554584 ZMYND10O75800 440 aa3.6□□□□□ -1.83
SYNE2-212ENST00000554584 CDC25AP30304 524 aa3.6□□□□□ -1.83
SYNE2-212ENST00000554584 DLK2Q6UY11 383 aa3.6□□□□□ -1.83
SYNE2-212ENST00000554584 NUDCD3Q8IVD9 361 aa3.6□□□□□ -1.83
SYNE2-212ENST00000554584 POLEQ07864 2286 aa3.6□□□□□ -1.83
SYNE2-212ENST00000554584 UBE2Q2LH0YL09 131 aa3.6□□□□□ -1.83
SYNE2-212ENST00000554584 SNX2O60749 519 aa3.6□□□□□ -1.83
SYNE2-212ENST00000554584 SNAP47Q5SQN1 464 aa3.6□□□□□ -1.83
SYNE2-212ENST00000554584 EXD1Q8NHP7 514 aa3.6□□□□□ -1.83
SYNE2-212ENST00000554584 ALKBH4Q9NXW9 302 aa3.6□□□□□ -1.83
SYNE2-212ENST00000554584 VPS54Q9P1Q0 977 aa3.6□□□□□ -1.83
SYNE2-212ENST00000554584 KRT15P19012 456 aa3.6□□□□□ -1.83
SYNE2-212ENST00000554584 LRP8Q14114 963 aa3.6□□□□□ -1.83
SYNE2-212ENST00000554584 SYT10Q6XYQ8 523 aa3.6□□□□□ -1.83
SYNE2-212ENST00000554584 OR6P1Q8NGX9 317 aa3.6□□□□□ -1.83
SYNE2-212ENST00000554584 RAD54LQ92698 747 aa3.6□□□□□ -1.83
SYNE2-212ENST00000554584 CPA4Q9UI42 421 aa3.6□□□□□ -1.83
SYNE2-212ENST00000554584 GGA1Q9UJY5 639 aa3.6□□□□□ -1.83
SYNE2-212ENST00000554584 RRBP1Q9P2E9 1410 aaKnown RBP3.6□□□□□ -1.83
SYNE2-212ENST00000554584 MYH11P35749 1972 aa3.6□□□□□ -1.83
SYNE2-212ENST00000554584 MAP1BP46821 2468 aaKnown RBP3.6□□□□□ -1.83
SYNE2-212ENST00000554584 LAYNQ6UX15 382 aa3.6□□□□□ -1.83
SYNE2-212ENST00000554584 AIFM3Q96NN9 605 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms