RNA–Protein interactions for RNA: ENST00000554482.1

NPC2-205, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 2

Gene NPC2, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-205ENST00000554482 CRBNQ96SW2 442 aa13.16□□□□□ -0.3
NPC2-205ENST00000554482 TMEM47Q9BQJ4 181 aa13.16□□□□□ -0.3
NPC2-205ENST00000554482 TRPV6Q9H1D0 765 aa13.16□□□□□ -0.3
NPC2-205ENST00000554482 PRDM12Q9H4Q4 367 aa13.16□□□□□ -0.3
NPC2-205ENST00000554482 MSRAQ9UJ68 235 aa13.16□□□□□ -0.3
NPC2-205ENST00000554482 FGAP02671 866 aa13.15□□□□□ -0.3
NPC2-205ENST00000554482 FGBP02675 491 aa13.15□□□□□ -0.3
NPC2-205ENST00000554482 MYL3P08590 195 aa13.15□□□□□ -0.3
NPC2-205ENST00000554482 NMIQ13287 307 aaPredicted RBP13.15□□□□□ -0.3
NPC2-205ENST00000554482 ALX1Q15699 326 aa13.15□□□□□ -0.3
NPC2-205ENST00000554482 RAB30Q15771 203 aa13.15□□□□□ -0.3
NPC2-205ENST00000554482 MCMDC2Q4G0Z9 681 aa13.15□□□□□ -0.3
NPC2-205ENST00000554482 RASIP1Q5U651 963 aa13.15□□□□□ -0.3
NPC2-205ENST00000554482 SLC30A10Q6XR72 485 aa13.15□□□□□ -0.3
NPC2-205ENST00000554482 SLC43A3Q8NBI5 491 aa13.15□□□□□ -0.3
NPC2-205ENST00000554482 RILPL2Q969X0 211 aa13.15□□□□□ -0.3
NPC2-205ENST00000554482 CXXC1Q9P0U4 656 aaPredicted RBP13.15□□□□□ -0.3
NPC2-205ENST00000554482 Q9Y3F1 56 aa13.15□□□□□ -0.3
NPC2-205ENST00000554482 GRIN2DO15399 1336 aa13.14□□□□□ -0.31
NPC2-205ENST00000554482 ZBBXA8MT70 800 aa13.14□□□□□ -0.31
NPC2-205ENST00000554482 FGRP09769 529 aa13.14□□□□□ -0.31
NPC2-205ENST00000554482 HSPD1P10809 573 aaKnown RBP13.14□□□□□ -0.31
NPC2-205ENST00000554482 PDHBP11177 359 aa13.14□□□□□ -0.31
NPC2-205ENST00000554482 NOVP48745 357 aa13.14□□□□□ -0.31
NPC2-205ENST00000554482 CPT1AP50416 773 aa13.14□□□□□ -0.31
NPC2-205ENST00000554482 PDE4DQ08499 809 aa13.14□□□□□ -0.31
NPC2-205ENST00000554482 DUSP28Q4G0W2 176 aa13.14□□□□□ -0.31
NPC2-205ENST00000554482 FAM47CQ5HY64 1035 aa13.14□□□□□ -0.31
NPC2-205ENST00000554482 BTNL9Q6UXG8 535 aa13.14□□□□□ -0.31
NPC2-205ENST00000554482 RNF207Q6ZRF8 634 aa13.14□□□□□ -0.31
NPC2-205ENST00000554482 MFSD6Q6ZSS7 791 aa13.14□□□□□ -0.31
NPC2-205ENST00000554482 ZNF589Q86UQ0 364 aaPredicted RBP13.14□□□□□ -0.31
NPC2-205ENST00000554482 OR6J1Q8NGC5 347 aa13.14□□□□□ -0.31
NPC2-205ENST00000554482 HERVK_113Q902F9 699 aa13.14□□□□□ -0.31
NPC2-205ENST00000554482 SYMPKQ92797 1274 aaKnown RBP13.14□□□□□ -0.31
NPC2-205ENST00000554482 SCLYQ96I15 445 aa13.14□□□□□ -0.31
NPC2-205ENST00000554482 MPHOSPH6Q99547 160 aaKnown RBP13.14□□□□□ -0.31
NPC2-205ENST00000554482 NOC4LQ9BVI4 516 aaKnown RBP13.14□□□□□ -0.31
NPC2-205ENST00000554482 SEZ6LQ9BYH1 1024 aa13.14□□□□□ -0.31
NPC2-205ENST00000554482 WDR11Q9BZH6 1224 aa13.14□□□□□ -0.31
NPC2-205ENST00000554482 WNT8AQ9H1J5 351 aa13.14□□□□□ -0.31
NPC2-205ENST00000554482 NKX2-4Q9H2Z4 354 aa13.14□□□□□ -0.31
NPC2-205ENST00000554482 GPHNQ9NQX3 736 aaPredicted RBP13.14□□□□□ -0.31
NPC2-205ENST00000554482 POLR3EQ9NVU0 708 aa13.14□□□□□ -0.31
NPC2-205ENST00000554482 CCDC171Q6TFL3 1326 aa13.13□□□□□ -0.31
NPC2-205ENST00000554482 GBF1Q92538 1859 aa13.13□□□□□ -0.31
NPC2-205ENST00000554482 IGFBP4P22692 258 aa13.13□□□□□ -0.31
NPC2-205ENST00000554482 PPP2R5BQ15173 497 aa13.13□□□□□ -0.31
NPC2-205ENST00000554482 USH1GQ495M9 461 aa13.13□□□□□ -0.31
NPC2-205ENST00000554482 MORC4Q8TE76 937 aa13.13□□□□□ -0.31
NPC2-205ENST00000554482 LNPKQ9C0E8 428 aa13.13□□□□□ -0.31
NPC2-205ENST00000554482 ALDH8A1Q9H2A2 487 aaPredicted RBP13.13□□□□□ -0.31
NPC2-205ENST00000554482 SLC28A3Q9HAS3 691 aa13.13□□□□□ -0.31
NPC2-205ENST00000554482 TRMT13Q9NUP7 481 aaKnown RBP13.13□□□□□ -0.31
NPC2-205ENST00000554482 ZMYM6O95789 1325 aa13.13□□□□□ -0.31
NPC2-205ENST00000554482 RAD50Q92878 1312 aa13.13□□□□□ -0.31
NPC2-205ENST00000554482 CYP2C9P11712 490 aa13.12□□□□□ -0.31
NPC2-205ENST00000554482 CHMP4BP1P59074 171 aa13.12□□□□□ -0.31
NPC2-205ENST00000554482 PURAQ00577 322 aaKnown RBP13.12□□□□□ -0.31
NPC2-205ENST00000554482 ZNF543Q08ER8 600 aa13.12□□□□□ -0.31
NPC2-205ENST00000554482 CCDC85BQ15834 202 aaPredicted RBP13.12□□□□□ -0.31
NPC2-205ENST00000554482 BRDTQ58F21 947 aaPredicted RBP13.12□□□□□ -0.31
NPC2-205ENST00000554482 TJAP1Q5JTD0 557 aa13.12□□□□□ -0.31
NPC2-205ENST00000554482 AKNAD1Q5T1N1 836 aa13.12□□□□□ -0.31
NPC2-205ENST00000554482 TBC1D10CQ8IV04 446 aa13.12□□□□□ -0.31
NPC2-205ENST00000554482 RPUSD2Q8IZ73 545 aaKnown RBP13.12□□□□□ -0.31
NPC2-205ENST00000554482 ZKSCAN3Q9BRR0 538 aa13.12□□□□□ -0.31
NPC2-205ENST00000554482 PRDM6Q9NQX0 595 aa13.12□□□□□ -0.31
NPC2-205ENST00000554482 TCP11L1Q9NUJ3 509 aa13.12□□□□□ -0.31
NPC2-205ENST00000554482 PNMA2Q9UL42 364 aa13.12□□□□□ -0.31
NPC2-205ENST00000554482 SLC4A7Q9Y6M7 1214 aa13.12□□□□□ -0.31
NPC2-205ENST00000554482 TNKSO95271 1327 aa13.12□□□□□ -0.31
NPC2-205ENST00000554482 NEDD4P46934 1319 aa13.12□□□□□ -0.31
NPC2-205ENST00000554482 LOC102724159A0A0B4J2E5 919 aa13.11□□□□□ -0.31
NPC2-205ENST00000554482 SUPT20HL2P0C7V6 817 aa13.11□□□□□ -0.31
NPC2-205ENST00000554482 GOLGA8HP0CJ92 632 aa13.11□□□□□ -0.31
NPC2-205ENST00000554482 RABGGTBP53611 331 aa13.11□□□□□ -0.31
NPC2-205ENST00000554482 MFAP1P55081 439 aaKnown RBP13.11□□□□□ -0.31
NPC2-205ENST00000554482 RPS6P62753 249 aaKnown RBP13.11□□□□□ -0.31
NPC2-205ENST00000554482 HDAC1Q13547 482 aaPredicted RBP13.11□□□□□ -0.31
NPC2-205ENST00000554482 PWP2Q15269 919 aaKnown RBP13.11□□□□□ -0.31
NPC2-205ENST00000554482 PPP2R2DQ66LE6 453 aa13.11□□□□□ -0.31
NPC2-205ENST00000554482 B4GALNT3Q6L9W6 998 aa13.11□□□□□ -0.31
NPC2-205ENST00000554482 DEFB128Q7Z7B8 93 aa13.11□□□□□ -0.31
NPC2-205ENST00000554482 PPP1R13LQ8WUF5 828 aa13.11□□□□□ -0.31
NPC2-205ENST00000554482 CLEC4DQ8WXI8 215 aa13.11□□□□□ -0.31
NPC2-205ENST00000554482 ESR2Q92731 530 aa13.11□□□□□ -0.31
NPC2-205ENST00000554482 MTG1Q9BT17 334 aaPredicted RBP13.11□□□□□ -0.31
NPC2-205ENST00000554482 RNF41Q9H4P4 317 aaPredicted RBP13.11□□□□□ -0.31
NPC2-205ENST00000554482 YBX2Q9Y2T7 364 aaKnown RBP13.11□□□□□ -0.31
NPC2-205ENST00000554482 WDR19Q8NEZ3 1342 aa13.11□□□□□ -0.31
NPC2-205ENST00000554482 B4DLN1 442 aa13.1□□□□□ -0.31
NPC2-205ENST00000554482 PCP11498 1178 aaKnown RBP13.1□□□□□ -0.31
NPC2-205ENST00000554482 MRPL12P52815 198 aaKnown RBP13.1□□□□□ -0.31
NPC2-205ENST00000554482 GPATCH4Q5T3I0 446 aaKnown RBP13.1□□□□□ -0.31
NPC2-205ENST00000554482 MICALL1Q8N3F8 863 aa13.1□□□□□ -0.31
NPC2-205ENST00000554482 SCFD2Q8WU76 684 aa13.1□□□□□ -0.31
NPC2-205ENST00000554482 COPS5Q92905 334 aa13.1□□□□□ -0.31
NPC2-205ENST00000554482 TTC14Q96N46 770 aa13.1□□□□□ -0.31
NPC2-205ENST00000554482 CPVLQ9H3G5 476 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms