RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 Q9Y3F1 56 aa13.71□□□□□ -0.21
TUBB3-204ENST00000554116 WDFY4Q6ZS81 3184 aa13.7□□□□□ -0.22
TUBB3-204ENST00000554116 RBM47A0AV96 593 aaKnown RBP13.7□□□□□ -0.22
TUBB3-204ENST00000554116 NFIBO00712 420 aa13.7□□□□□ -0.22
TUBB3-204ENST00000554116 FGRP09769 529 aa13.7□□□□□ -0.22
TUBB3-204ENST00000554116 CYP2C9P11712 490 aa13.7□□□□□ -0.22
TUBB3-204ENST00000554116 BMP1P13497 986 aa13.7□□□□□ -0.22
TUBB3-204ENST00000554116 HOXD11P31277 338 aaPredicted RBP13.7□□□□□ -0.22
TUBB3-204ENST00000554116 PDE4BQ07343 736 aa13.7□□□□□ -0.22
TUBB3-204ENST00000554116 DUSP28Q4G0W2 176 aa13.7□□□□□ -0.22
TUBB3-204ENST00000554116 BTNL9Q6UXG8 535 aa13.7□□□□□ -0.22
TUBB3-204ENST00000554116 NOL8Q76FK4 1167 aaKnown RBP13.7□□□□□ -0.22
TUBB3-204ENST00000554116 NECAB3Q96P71 396 aaPredicted RBP13.7□□□□□ -0.22
TUBB3-204ENST00000554116 MTIF3Q9H2K0 278 aaKnown RBP13.7□□□□□ -0.22
TUBB3-204ENST00000554116 RANBP17Q9H2T7 1088 aaKnown RBP13.7□□□□□ -0.22
TUBB3-204ENST00000554116 ZNF287Q9HBT7 754 aa13.7□□□□□ -0.22
TUBB3-204ENST00000554116 TRMT13Q9NUP7 481 aaKnown RBP13.7□□□□□ -0.22
TUBB3-204ENST00000554116 TRIP12Q14669 1992 aaPredicted RBP13.7□□□□□ -0.22
TUBB3-204ENST00000554116 C5orf42Q9H799 3197 aa13.69□□□□□ -0.22
TUBB3-204ENST00000554116 EPOPA6NHQ4 379 aa13.69□□□□□ -0.22
TUBB3-204ENST00000554116 RFXAPO00287 272 aa13.69□□□□□ -0.22
TUBB3-204ENST00000554116 ICAM1P05362 532 aa13.69□□□□□ -0.22
TUBB3-204ENST00000554116 IGFBP4P22692 258 aa13.69□□□□□ -0.22
TUBB3-204ENST00000554116 SLC16A2P36021 539 aa13.69□□□□□ -0.22
TUBB3-204ENST00000554116 PURAQ00577 322 aaKnown RBP13.69□□□□□ -0.22
TUBB3-204ENST00000554116 TFF2Q03403 129 aa13.69□□□□□ -0.22
TUBB3-204ENST00000554116 BAATQ14032 418 aaPredicted RBP13.69□□□□□ -0.22
TUBB3-204ENST00000554116 KIAA1211Q6ZU35 1233 aa13.69□□□□□ -0.22
TUBB3-204ENST00000554116 CLEC4DQ8WXI8 215 aa13.69□□□□□ -0.22
TUBB3-204ENST00000554116 AP5M1Q9H0R1 490 aa13.69□□□□□ -0.22
TUBB3-204ENST00000554116 NAPBQ9H115 298 aa13.69□□□□□ -0.22
TUBB3-204ENST00000554116 SLC28A3Q9HAS3 691 aa13.69□□□□□ -0.22
TUBB3-204ENST00000554116 VTA1Q9NP79 307 aa13.69□□□□□ -0.22
TUBB3-204ENST00000554116 ANAPC4Q9UJX5 808 aa13.69□□□□□ -0.22
TUBB3-204ENST00000554116 STX8Q9UNK0 236 aa13.69□□□□□ -0.22
TUBB3-204ENST00000554116 ARIH1Q9Y4X5 557 aaPredicted RBP13.69□□□□□ -0.22
TUBB3-204ENST00000554116 TTC41PQ6P2S7 1318 aa13.68□□□□□ -0.22
TUBB3-204ENST00000554116 AAK1Q2M2I8 961 aa13.68□□□□□ -0.22
TUBB3-204ENST00000554116 NSMFQ6X4W1 530 aa13.68□□□□□ -0.22
TUBB3-204ENST00000554116 SPRED2Q7Z698 418 aa13.68□□□□□ -0.22
TUBB3-204ENST00000554116 NACAP1Q9BZK3 213 aa13.68□□□□□ -0.22
TUBB3-204ENST00000554116 PCDHA11Q9Y5I1 949 aa13.68□□□□□ -0.22
TUBB3-204ENST00000554116 TANC1Q9C0D5 1861 aa13.67□□□□□ -0.22
TUBB3-204ENST00000554116 PIEZO1Q92508 2521 aa13.67□□□□□ -0.22
TUBB3-204ENST00000554116 ORC4O43929 436 aa13.67□□□□□ -0.22
TUBB3-204ENST00000554116 POU3F3P20264 500 aaPredicted RBP13.67□□□□□ -0.22
TUBB3-204ENST00000554116 ALDH5A1P51649 535 aaPredicted RBP13.67□□□□□ -0.22
TUBB3-204ENST00000554116 IKQ13123 557 aaPredicted RBP13.67□□□□□ -0.22
TUBB3-204ENST00000554116 GPNMBQ14956 572 aa13.67□□□□□ -0.22
TUBB3-204ENST00000554116 KRT40Q6A162 431 aa13.67□□□□□ -0.22
TUBB3-204ENST00000554116 SLC30A10Q6XR72 485 aa13.67□□□□□ -0.22
TUBB3-204ENST00000554116 GPATCH3Q96I76 525 aa13.67□□□□□ -0.22
TUBB3-204ENST00000554116 CTAGE1Q96RT6 745 aa13.67□□□□□ -0.22
TUBB3-204ENST00000554116 SEZ6LQ9BYH1 1024 aa13.67□□□□□ -0.22
TUBB3-204ENST00000554116 WDR11Q9BZH6 1224 aa13.67□□□□□ -0.22
TUBB3-204ENST00000554116 CCPG1Q9ULG6 757 aa13.67□□□□□ -0.22
TUBB3-204ENST00000554116 ISY1Q9ULR0 285 aaKnown RBP13.67□□□□□ -0.22
TUBB3-204ENST00000554116 MTMR7Q9Y216 660 aa13.67□□□□□ -0.22
TUBB3-204ENST00000554116 HCN4Q9Y3Q4 1203 aa13.67□□□□□ -0.22
TUBB3-204ENST00000554116 MTCH2Q9Y6C9 303 aa13.67□□□□□ -0.22
TUBB3-204ENST00000554116 SLC4A7Q9Y6M7 1214 aa13.67□□□□□ -0.22
TUBB3-204ENST00000554116 TNKSO95271 1327 aa13.66□□□□□ -0.22
TUBB3-204ENST00000554116 TSPY2A6NKD2 308 aa13.66□□□□□ -0.22
TUBB3-204ENST00000554116 EDNRBP24530 442 aa13.66□□□□□ -0.22
TUBB3-204ENST00000554116 ALX1Q15699 326 aa13.66□□□□□ -0.22
TUBB3-204ENST00000554116 NBPF20Q3BBV1 942 aa13.66□□□□□ -0.22
TUBB3-204ENST00000554116 DCAF4Q8WV16 495 aa13.66□□□□□ -0.22
TUBB3-204ENST00000554116 COPS5Q92905 334 aa13.66□□□□□ -0.22
TUBB3-204ENST00000554116 TMEM47Q9BQJ4 181 aa13.66□□□□□ -0.22
TUBB3-204ENST00000554116 FSD1Q9BTV5 496 aa13.66□□□□□ -0.22
TUBB3-204ENST00000554116 ZEB2O60315 1214 aa13.65□□□□□ -0.22
TUBB3-204ENST00000554116 RANBP6O60518 1105 aaKnown RBP13.65□□□□□ -0.22
TUBB3-204ENST00000554116 ARIH2O95376 493 aa13.65□□□□□ -0.22
TUBB3-204ENST00000554116 SLC3A2P08195 630 aaKnown RBP13.65□□□□□ -0.22
TUBB3-204ENST00000554116 ATP2A2P16615 1042 aaKnown RBP13.65□□□□□ -0.22
TUBB3-204ENST00000554116 KCNQ1P51787 676 aa13.65□□□□□ -0.22
TUBB3-204ENST00000554116 SYDE2Q5VT97 1194 aa13.65□□□□□ -0.22
TUBB3-204ENST00000554116 PPP2R2DQ66LE6 453 aa13.65□□□□□ -0.22
TUBB3-204ENST00000554116 DEFB128Q7Z7B8 93 aa13.65□□□□□ -0.22
TUBB3-204ENST00000554116 RPUSD2Q8IZ73 545 aaKnown RBP13.65□□□□□ -0.22
TUBB3-204ENST00000554116 ZBTB47Q9UFB7 747 aaPredicted RBP13.65□□□□□ -0.22
TUBB3-204ENST00000554116 A6NJR5 290 aa13.64□□□□□ -0.23
TUBB3-204ENST00000554116 LPXNO60711 386 aa13.64□□□□□ -0.23
TUBB3-204ENST00000554116 FGAP02671 866 aa13.64□□□□□ -0.23
TUBB3-204ENST00000554116 CA3P07451 260 aa13.64□□□□□ -0.23
TUBB3-204ENST00000554116 IQCF3P0C7M6 154 aa13.64□□□□□ -0.23
TUBB3-204ENST00000554116 TAP1Q03518 808 aa13.64□□□□□ -0.23
TUBB3-204ENST00000554116 HDAC1Q13547 482 aaPredicted RBP13.64□□□□□ -0.23
TUBB3-204ENST00000554116 AAMPQ13685 434 aa13.64□□□□□ -0.23
TUBB3-204ENST00000554116 ANKRD45Q5TZF3 282 aa13.64□□□□□ -0.23
TUBB3-204ENST00000554116 FAM227BQ96M60 508 aa13.64□□□□□ -0.23
TUBB3-204ENST00000554116 CERS4Q9HA82 394 aa13.64□□□□□ -0.23
TUBB3-204ENST00000554116 GPCPD1Q9NPB8 672 aa13.64□□□□□ -0.23
TUBB3-204ENST00000554116 POLR3EQ9NVU0 708 aa13.64□□□□□ -0.23
TUBB3-204ENST00000554116 SUPT16HQ9Y5B9 1047 aaKnown RBP13.64□□□□□ -0.23
TUBB3-204ENST00000554116 FRMPD2Q68DX3 1309 aaPredicted RBP13.64□□□□□ -0.23
TUBB3-204ENST00000554116 LOC102724159A0A0B4J2E5 919 aa13.63□□□□□ -0.23
TUBB3-204ENST00000554116 ZBBXA8MT70 800 aa13.63□□□□□ -0.23
TUBB3-204ENST00000554116 ERC2O15083 957 aa13.63□□□□□ -0.23
TUBB3-204ENST00000554116 MYL3P08590 195 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms