RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 HMGB1P09429 215 aaKnown RBP18.63■□□□□ 0.57
ACTN1-209ENST00000553659 DNAJB2P25686 324 aa18.63■□□□□ 0.57
ACTN1-209ENST00000553659 SLC1A4P43007 532 aa18.63■□□□□ 0.57
ACTN1-209ENST00000553659 TKFCQ3LXA3 575 aa18.63■□□□□ 0.57
ACTN1-209ENST00000553659 PPP4R3BQ5MIZ7 849 aa18.63■□□□□ 0.57
ACTN1-209ENST00000553659 CCDC174Q6PII3 467 aa18.63■□□□□ 0.57
ACTN1-209ENST00000553659 ZNF589Q86UQ0 364 aaPredicted RBP18.63■□□□□ 0.57
ACTN1-209ENST00000553659 AGBL1Q96MI9 1066 aa18.63■□□□□ 0.57
ACTN1-209ENST00000553659 A1CFQ9NQ94 594 aaKnown RBP18.63■□□□□ 0.57
ACTN1-209ENST00000553659 ISY1Q9ULR0 285 aaKnown RBP18.63■□□□□ 0.57
ACTN1-209ENST00000553659 ZNF536O15090 1300 aa18.63■□□□□ 0.57
ACTN1-209ENST00000553659 ASB14A6NK59 587 aa18.62■□□□□ 0.57
ACTN1-209ENST00000553659 TLR3O15455 904 aaKnown RBP18.62■□□□□ 0.57
ACTN1-209ENST00000553659 TNFAIP2Q03169 654 aa18.62■□□□□ 0.57
ACTN1-209ENST00000553659 GRIN2CQ14957 1233 aa18.62■□□□□ 0.57
ACTN1-209ENST00000553659 BLOC1S2Q6QNY1 142 aa18.62■□□□□ 0.57
ACTN1-209ENST00000553659 C16orf59Q7L2K0 433 aa18.62■□□□□ 0.57
ACTN1-209ENST00000553659 FAM126BQ8IXS8 530 aa18.62■□□□□ 0.57
ACTN1-209ENST00000553659 TMEM199Q8N511 208 aa18.62■□□□□ 0.57
ACTN1-209ENST00000553659 RNF146Q9NTX7 359 aa18.62■□□□□ 0.57
ACTN1-209ENST00000553659 FOXD4L1Q9NU39 408 aa18.62■□□□□ 0.57
ACTN1-209ENST00000553659 CTNNA3Q9UI47 895 aa18.62■□□□□ 0.57
ACTN1-209ENST00000553659 SOWAHBA6NEL2 793 aa18.61■□□□□ 0.57
ACTN1-209ENST00000553659 IKQ13123 557 aaPredicted RBP18.61■□□□□ 0.57
ACTN1-209ENST00000553659 SKOR2Q2VWA4 1001 aaPredicted RBP18.61■□□□□ 0.57
ACTN1-209ENST00000553659 TMEM240Q5SV17 173 aa18.61■□□□□ 0.57
ACTN1-209ENST00000553659 RCSD1Q6JBY9 416 aa18.61■□□□□ 0.57
ACTN1-209ENST00000553659 TRERF1Q96PN7 1200 aa18.61■□□□□ 0.57
ACTN1-209ENST00000553659 ZNF576Q9H609 170 aa18.61■□□□□ 0.57
ACTN1-209ENST00000553659 GNEQ9Y223 722 aaKnown RBP18.61■□□□□ 0.57
ACTN1-209ENST00000553659 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.6■□□□□ 0.57
ACTN1-209ENST00000553659 CD4P01730 458 aa18.6■□□□□ 0.57
ACTN1-209ENST00000553659 ALAS1P13196 640 aa18.6■□□□□ 0.57
ACTN1-209ENST00000553659 CSF2RAP15509 400 aa18.6■□□□□ 0.57
ACTN1-209ENST00000553659 AK2P54819 239 aa18.6■□□□□ 0.57
ACTN1-209ENST00000553659 BEX3Q00994 111 aa18.6■□□□□ 0.57
ACTN1-209ENST00000553659 RASIP1Q5U651 963 aa18.6■□□□□ 0.57
ACTN1-209ENST00000553659 NOL8Q76FK4 1167 aaKnown RBP18.6■□□□□ 0.57
ACTN1-209ENST00000553659 CHMP4CQ96CF2 233 aa18.6■□□□□ 0.57
ACTN1-209ENST00000553659 TIFAQ96CG3 184 aa18.6■□□□□ 0.57
ACTN1-209ENST00000553659 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.6■□□□□ 0.57
ACTN1-209ENST00000553659 LCTP09848 1927 aa18.6■□□□□ 0.57
ACTN1-209ENST00000553659 LRRC37A2A6NM11 1700 aa18.6■□□□□ 0.57
ACTN1-209ENST00000553659 GBF1Q92538 1859 aa18.59■□□□□ 0.57
ACTN1-209ENST00000553659 ASTN1O14525 1302 aa18.59■□□□□ 0.57
ACTN1-209ENST00000553659 TSPY2A6NKD2 308 aa18.59■□□□□ 0.57
ACTN1-209ENST00000553659 CABYRO75952 493 aa18.59■□□□□ 0.57
ACTN1-209ENST00000553659 RPS6KB1P23443 525 aa18.59■□□□□ 0.57
ACTN1-209ENST00000553659 CCDC129Q6ZRS4 1044 aa18.59■□□□□ 0.57
ACTN1-209ENST00000553659 KCTD1Q719H9 257 aa18.59■□□□□ 0.57
ACTN1-209ENST00000553659 SLC43A3Q8NBI5 491 aa18.59■□□□□ 0.57
ACTN1-209ENST00000553659 PPP1R12CQ9BZL4 782 aa18.59■□□□□ 0.57
ACTN1-209ENST00000553659 IL17RBQ9NRM6 502 aa18.59■□□□□ 0.57
ACTN1-209ENST00000553659 PRR12Q9ULL5 1215 aa18.59■□□□□ 0.57
ACTN1-209ENST00000553659 STX8Q9UNK0 236 aa18.59■□□□□ 0.57
ACTN1-209ENST00000553659 EYSQ5T1H1 3165 aa18.58■□□□□ 0.57
ACTN1-209ENST00000553659 FOXP2O15409 715 aa18.58■□□□□ 0.56
ACTN1-209ENST00000553659 CTDSPL2Q05D32 466 aa18.58■□□□□ 0.56
ACTN1-209ENST00000553659 IQSEC1Q6DN90 963 aa18.58■□□□□ 0.56
ACTN1-209ENST00000553659 PSRC1Q6PGN9 363 aaPredicted RBP18.58■□□□□ 0.56
ACTN1-209ENST00000553659 CXCL17Q6UXB2 119 aa18.58■□□□□ 0.56
ACTN1-209ENST00000553659 ZNF365Q70YC5 407 aa18.58■□□□□ 0.56
ACTN1-209ENST00000553659 TLK2Q86UE8 772 aa18.58■□□□□ 0.56
ACTN1-209ENST00000553659 NEK1Q96PY6 1258 aa18.58■□□□□ 0.56
ACTN1-209ENST00000553659 SEZ6LQ9BYH1 1024 aa18.58■□□□□ 0.56
ACTN1-209ENST00000553659 AP5M1Q9H0R1 490 aa18.58■□□□□ 0.56
ACTN1-209ENST00000553659 INCENPQ9NQS7 918 aa18.58■□□□□ 0.56
ACTN1-209ENST00000553659 CYP39A1Q9NYL5 469 aa18.58■□□□□ 0.56
ACTN1-209ENST00000553659 Q9Y3F1 56 aa18.58■□□□□ 0.56
ACTN1-209ENST00000553659 GRXCR1A8MXD5 290 aa18.57■□□□□ 0.56
ACTN1-209ENST00000553659 ZEB2O60315 1214 aa18.57■□□□□ 0.56
ACTN1-209ENST00000553659 NMT2O60551 498 aa18.57■□□□□ 0.56
ACTN1-209ENST00000553659 ACRP10323 421 aa18.57■□□□□ 0.56
ACTN1-209ENST00000553659 SMPD1P17405 629 aa18.57■□□□□ 0.56
ACTN1-209ENST00000553659 CYP2C18P33260 490 aa18.57■□□□□ 0.56
ACTN1-209ENST00000553659 SNAP25P60880 206 aa18.57■□□□□ 0.56
ACTN1-209ENST00000553659 ITGA7Q13683 1181 aa18.57■□□□□ 0.56
ACTN1-209ENST00000553659 GSE1Q14687 1217 aa18.57■□□□□ 0.56
ACTN1-209ENST00000553659 FSCN1Q16658 493 aaKnown RBP18.57■□□□□ 0.56
ACTN1-209ENST00000553659 ADCK5Q3MIX3 580 aa18.57■□□□□ 0.56
ACTN1-209ENST00000553659 MUM1L1Q5H9M0 696 aa18.57■□□□□ 0.56
ACTN1-209ENST00000553659 SYMPKQ92797 1274 aaKnown RBP18.57■□□□□ 0.56
ACTN1-209ENST00000553659 PBX4Q9BYU1 374 aa18.57■□□□□ 0.56
ACTN1-209ENST00000553659 IL23AQ9NPF7 189 aa18.57■□□□□ 0.56
ACTN1-209ENST00000553659 DYNC1LI2O43237 492 aaPredicted RBP18.56■□□□□ 0.56
ACTN1-209ENST00000553659 HSPD1P10809 573 aaKnown RBP18.56■□□□□ 0.56
ACTN1-209ENST00000553659 PBX2P40425 430 aa18.56■□□□□ 0.56
ACTN1-209ENST00000553659 NOVP48745 357 aa18.56■□□□□ 0.56
ACTN1-209ENST00000553659 TAPT1Q6NXT6 567 aa18.56■□□□□ 0.56
ACTN1-209ENST00000553659 HERVK_113Q902F9 699 aa18.56■□□□□ 0.56
ACTN1-209ENST00000553659 PDGFCQ9NRA1 345 aa18.56■□□□□ 0.56
ACTN1-209ENST00000553659 ANAPC4Q9UJX5 808 aa18.56■□□□□ 0.56
ACTN1-209ENST00000553659 CCPG1Q9ULG6 757 aa18.56■□□□□ 0.56
ACTN1-209ENST00000553659 CDH23Q9H251 3354 aa18.56■□□□□ 0.56
ACTN1-209ENST00000553659 PRUNE2Q8WUY3 3088 aa18.55■□□□□ 0.56
ACTN1-209ENST00000553659 GRIN2DO15399 1336 aa18.55■□□□□ 0.56
ACTN1-209ENST00000553659 RANBP6O60518 1105 aaKnown RBP18.55■□□□□ 0.56
ACTN1-209ENST00000553659 EEPD1Q7L9B9 569 aa18.55■□□□□ 0.56
ACTN1-209ENST00000553659 MORC4Q8TE76 937 aa18.55■□□□□ 0.56
ACTN1-209ENST00000553659 HIPK3Q9H422 1215 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms