RNA–Protein interactions for RNA: ENST00000552555.1

DDX23-215, Transcript of DEAD-box helicase 23, human

TSL 4

Gene DDX23, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX23-215	ENST00000552555	TPM4	P67936	248 aa		11.63	□□□□□ -0.55
DDX23-215	ENST00000552555	KCNB1	Q14721	858 aa		11.63	□□□□□ -0.55
DDX23-215	ENST00000552555	CALCRL	Q16602	461 aa		11.63	□□□□□ -0.55
DDX23-215	ENST00000552555		Q4G0T1	1027 aa		11.63	□□□□□ -0.55
DDX23-215	ENST00000552555	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.63	□□□□□ -0.55
DDX23-215	ENST00000552555	HYI	Q5T013	277 aa		11.63	□□□□□ -0.55
DDX23-215	ENST00000552555	FAM83B	Q5T0W9	1011 aa		11.63	□□□□□ -0.55
DDX23-215	ENST00000552555	CNNM4	Q6P4Q7	775 aa		11.63	□□□□□ -0.55
DDX23-215	ENST00000552555	CABP7	Q86V35	215 aa		11.63	□□□□□ -0.55
DDX23-215	ENST00000552555	POTED	Q86YR6	584 aa		11.63	□□□□□ -0.55
DDX23-215	ENST00000552555	GRAMD1C	Q8IYS0	662 aa		11.63	□□□□□ -0.55
DDX23-215	ENST00000552555	HAS1	Q92839	578 aa		11.63	□□□□□ -0.55
DDX23-215	ENST00000552555	P2RX7	Q99572	595 aa	Known RBP	11.63	□□□□□ -0.55
DDX23-215	ENST00000552555	ZNF341	Q9BYN7	854 aa		11.63	□□□□□ -0.55
DDX23-215	ENST00000552555	KCNMB3	Q9NPA1	279 aa		11.63	□□□□□ -0.55
DDX23-215	ENST00000552555	RRAGD	Q9NQL2	400 aa	Predicted RBP	11.63	□□□□□ -0.55
DDX23-215	ENST00000552555	ASTN2	O75129	1339 aa	Predicted RBP	11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	GOLGA6L6	A8MZA4	724 aa		11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	USP17L15	C9J2P7	530 aa		11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	USP17L13	C9JLJ4	530 aa		11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	USP17L11	C9JVI0	530 aa		11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	USP17L18	D6R9N7	530 aa		11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	USP17L22	D6RA61	530 aa		11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	USP17L17	D6RBQ6	530 aa		11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	USP17L19	D6RCP7	530 aa		11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	USP17L20	D6RJB6	530 aa		11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	ZNF500	O60304	480 aa	Predicted RBP	11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	ZNF18	P17022	549 aa		11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	HOXA7	P31268	230 aa	Predicted RBP	11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	STAT6	P42226	847 aa		11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	USP17L24	Q0WX57	530 aa		11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	CUL4B	Q13620	913 aa		11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	KARS	Q15046	597 aa	Known RBP	11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	NOL9	Q5SY16	702 aa	Known RBP	11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	NBPF12	Q5TAG4	269 aa	Predicted RBP	11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	RRAGB	Q5VZM2	374 aa		11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	USP17L6P	Q6QN14	398 aa		11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	SPICE1	Q8N0Z3	855 aa		11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	SAMD3	Q8N6K7	520 aa		11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	LRRC15	Q8TF66	581 aa		11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	C12orf42	Q96LP6	360 aa		11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	GLIS2	Q9BZE0	524 aa	Predicted RBP	11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	GTPBP4	Q9BZE4	634 aa	Known RBP	11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	RAB34	Q9BZG1	259 aa		11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	TRIM5	Q9C035	493 aa		11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	FHDC1	Q9C0D6	1143 aa	Predicted RBP	11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	RMND1	Q9NWS8	449 aa		11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	STK17A	Q9UEE5	414 aa		11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	DDX25	Q9UHL0	483 aa	Known RBP	11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	PNMA2	Q9UL42	364 aa		11.62	□□□□□ -0.55
DDX23-215	ENST00000552555	ABCB11	O95342	1321 aa		11.61	□□□□□ -0.55
DDX23-215	ENST00000552555	PP2D1	A8MPX8	630 aa		11.61	□□□□□ -0.55
DDX23-215	ENST00000552555	PPP1R3G	B7ZBB8	358 aa		11.61	□□□□□ -0.55
DDX23-215	ENST00000552555	FDX1	P10109	184 aa		11.61	□□□□□ -0.55
DDX23-215	ENST00000552555	TEC	P42680	631 aa		11.61	□□□□□ -0.55
DDX23-215	ENST00000552555	AFM	P43652	599 aa		11.61	□□□□□ -0.55
DDX23-215	ENST00000552555	HIRA	P54198	1017 aa	Predicted RBP	11.61	□□□□□ -0.55
DDX23-215	ENST00000552555	ARHGAP4	P98171	946 aa		11.61	□□□□□ -0.55
DDX23-215	ENST00000552555	TMEM266	Q2M3C6	531 aa		11.61	□□□□□ -0.55
DDX23-215	ENST00000552555	TMEM119	Q4V9L6	283 aa		11.61	□□□□□ -0.55
DDX23-215	ENST00000552555	ARHGAP27	Q6ZUM4	889 aa		11.61	□□□□□ -0.55
DDX23-215	ENST00000552555	SCYL3	Q8IZE3	742 aa		11.61	□□□□□ -0.55
DDX23-215	ENST00000552555	TRPM4	Q8TD43	1214 aa		11.61	□□□□□ -0.55
DDX23-215	ENST00000552555	MED15	Q96RN5	788 aa		11.61	□□□□□ -0.55
DDX23-215	ENST00000552555	C7orf25	Q9BPX7	421 aa		11.61	□□□□□ -0.55
DDX23-215	ENST00000552555	MRPL11	Q9Y3B7	192 aa	Known RBP	11.61	□□□□□ -0.55
DDX23-215	ENST00000552555	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.6	□□□□□ -0.55
DDX23-215	ENST00000552555	KLRC4	O43908	158 aa		11.6	□□□□□ -0.55
DDX23-215	ENST00000552555	RAD21	O60216	631 aa		11.6	□□□□□ -0.55
DDX23-215	ENST00000552555	RPN1	P04843	607 aa	Known RBP	11.6	□□□□□ -0.55
DDX23-215	ENST00000552555	ICAM1	P05362	532 aa		11.6	□□□□□ -0.55
DDX23-215	ENST00000552555	PTMA	P06454	111 aa	Known RBP	11.6	□□□□□ -0.55
DDX23-215	ENST00000552555	PLCG1	P19174	1290 aa		11.6	□□□□□ -0.55
DDX23-215	ENST00000552555	CDC25A	P30304	524 aa		11.6	□□□□□ -0.55
DDX23-215	ENST00000552555	INPP5B	P32019	993 aa		11.6	□□□□□ -0.55
DDX23-215	ENST00000552555	TXK	P42681	527 aa		11.6	□□□□□ -0.55
DDX23-215	ENST00000552555	USP14	P54578	494 aa		11.6	□□□□□ -0.55
DDX23-215	ENST00000552555	FMR1	Q06787	632 aa	Known RBP eCLIP	11.6	□□□□□ -0.55
DDX23-215	ENST00000552555	IK	Q13123	557 aa	Predicted RBP	11.6	□□□□□ -0.55
DDX23-215	ENST00000552555	GRB10	Q13322	594 aa		11.6	□□□□□ -0.55
DDX23-215	ENST00000552555	COBLL1	Q53SF7	1204 aa		11.6	□□□□□ -0.55
DDX23-215	ENST00000552555	ZNF658	Q5TYW1	1059 aa	Predicted RBP	11.6	□□□□□ -0.55
DDX23-215	ENST00000552555	ANGEL2	Q5VTE6	544 aa	Known RBP	11.6	□□□□□ -0.55
DDX23-215	ENST00000552555	ISM2	Q6H9L7	571 aa		11.6	□□□□□ -0.55
DDX23-215	ENST00000552555	SLFN12	Q8IYM2	578 aa		11.6	□□□□□ -0.55
DDX23-215	ENST00000552555	KCTD17	Q8N5Z5	321 aa		11.6	□□□□□ -0.55
DDX23-215	ENST00000552555	PRPF38A	Q8NAV1	312 aa	Known RBP	11.6	□□□□□ -0.55
DDX23-215	ENST00000552555	ETNPPL	Q8TBG4	499 aa		11.6	□□□□□ -0.55
DDX23-215	ENST00000552555	LENG9	Q96B70	501 aa		11.6	□□□□□ -0.55
DDX23-215	ENST00000552555	PNMA5	Q96PV4	448 aa		11.6	□□□□□ -0.55
DDX23-215	ENST00000552555	MAF1	Q9H063	256 aa		11.6	□□□□□ -0.55
DDX23-215	ENST00000552555	EMILIN3	Q9NT22	766 aa		11.6	□□□□□ -0.55
DDX23-215	ENST00000552555	MAP3K20	Q9NYL2	800 aa	Known RBP	11.6	□□□□□ -0.55
DDX23-215	ENST00000552555	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	11.6	□□□□□ -0.55
DDX23-215	ENST00000552555	LRWD1	Q9UFC0	647 aa		11.6	□□□□□ -0.55
DDX23-215	ENST00000552555	STK24	Q9Y6E0	443 aa		11.6	□□□□□ -0.55
DDX23-215	ENST00000552555	DICER1	Q9UPY3	1922 aa	Known RBP	11.6	□□□□□ -0.55
DDX23-215	ENST00000552555	ZNF536	O15090	1300 aa		11.6	□□□□□ -0.55
DDX23-215	ENST00000552555	SPDYE3	A6NKU9	549 aa		11.59	□□□□□ -0.55
DDX23-215	ENST00000552555	RHOBTB3	O94955	611 aa		11.59	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms