RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 ECE1P42892 770 aa9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 FKBP4Q02790 459 aaKnown RBP eCLIP9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 TBL3Q12788 808 aaKnown RBP9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 HSP90AA4PQ58FG1 418 aa9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 CC2D2BQ6DHV5 1058 aa9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 PASD1Q8IV76 773 aa9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 CALML6Q8TD86 181 aa9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 KRT12Q99456 494 aa9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 SAP30BPQ9UHR5 308 aaKnown RBP9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 CHMP2BQ9UQN3 213 aa9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 SH3GLB1Q9Y371 365 aa9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 SLC27A2O14975 620 aa9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 XPOTO43592 962 aaKnown RBP9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 PRPF6O94906 941 aaKnown RBP9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 AGTP01019 485 aa9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 MX2P20592 715 aa9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 ST13P50502 369 aaKnown RBP9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 RBM12BQ8IXT5 1001 aaKnown RBP9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 TRMT2AQ8IZ69 625 aaKnown RBP9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 ZFRQ96KR1 1074 aaKnown RBP9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 FUT8Q9BYC5 575 aa9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 PITPNM3Q9BZ71 974 aa9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 NDEL1Q9GZM8 345 aa9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 ZSWIM6Q9HCJ5 1215 aa9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 RIC8AQ9NPQ8 531 aa9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 PODXLO00592 558 aa9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 BYSLQ13895 437 aaKnown RBP9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 MORC3Q14149 939 aa9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 BEND3Q5T5X7 828 aa9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 TRPM8Q7Z2W7 1104 aa9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 RCOR1Q9UKL0 485 aa9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 ERCC6Q03468 1493 aa9.55□□□□□ -0.88
PPFIA2-220ENST00000550584 ANKRD65E5RJM6 399 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 KPNA4O00629 521 aaPredicted RBP9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 KCNK3O14649 394 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 TTI1O43156 1089 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 SPOPO43791 374 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 PFKFB1P16118 471 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 PSEN1P49768 467 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 KLHL30Q0D2K2 578 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 R3HDM1Q15032 1099 aaKnown RBP9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 TSC22D1Q15714 1073 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 WASHC2DQ5SRD0 308 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 NAA35Q5VZE5 725 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 RFWD2Q8NHY2 731 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 FAM129AQ9BZQ8 928 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 PPCSQ9HAB8 311 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 ETNK1Q9HBU6 452 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 AP4S1Q9Y587 144 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 CD2APQ9Y5K6 639 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 IPO5O00410 1097 aaKnown RBP9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 HAUS5O94927 633 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 MYL1P05976 194 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 CCDC166P0CW27 439 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 NQO1P15559 274 aaKnown RBP9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 SKOR1P84550 965 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 ASPHQ12797 758 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 TBCCQ15814 346 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 ESCO1Q5FWF5 840 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 ZNF274Q96GC6 653 aaPredicted RBP9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 CEP19Q96LK0 163 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 CNBD2Q96M20 576 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 ZKSCAN3Q9BRR0 538 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 USP15Q9Y4E8 981 aaPredicted RBP9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 COL17A1Q9UMD9 1497 aaPredicted RBP9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 hCG_2014768A0A024R1R8 64 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 ZNF839A8K0R7 811 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 EXOC5O00471 708 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 TSPAN9O75954 239 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 LCA5LO95447 670 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 CYP2E1P05181 493 aaPredicted RBP9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 KRT76Q01546 638 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 C2orf54Q08AI8 447 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 RAPGEF1Q13905 1077 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 LIN9Q5TKA1 542 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 PCNX4Q63HM2 1172 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 TMEM87BQ96K49 555 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 ST7Q9NRC1 585 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 TAB2Q9NYJ8 693 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 ORC6Q9Y5N6 252 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 CALUO43852 315 aaPredicted RBP9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 COPB1P53618 953 aaKnown RBP9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 KRT81Q14533 505 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 PATL1Q86TB9 770 aaKnown RBP9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 PDZD8Q8NEN9 1154 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 OSBPL3Q9H4L5 887 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 POLR3EQ9NVU0 708 aa9.54□□□□□ -0.88
PPFIA2-220ENST00000550584 ATP4AP20648 1035 aa9.53□□□□□ -0.88
PPFIA2-220ENST00000550584 KRT72Q14CN4 511 aa9.53□□□□□ -0.88
PPFIA2-220ENST00000550584 CWF19L2Q2TBE0 894 aaKnown RBP9.53□□□□□ -0.88
PPFIA2-220ENST00000550584 GRAMD1BQ3KR37 738 aa9.53□□□□□ -0.88
PPFIA2-220ENST00000550584 FMO2Q99518 471 aa9.53□□□□□ -0.88
PPFIA2-220ENST00000550584 TSPY2A6NKD2 308 aa9.53□□□□□ -0.88
PPFIA2-220ENST00000550584 CCDC22O60826 627 aa9.53□□□□□ -0.88
PPFIA2-220ENST00000550584 TRPA1O75762 1119 aa9.53□□□□□ -0.88
PPFIA2-220ENST00000550584 TSPY3P0CV98 308 aa9.53□□□□□ -0.88
PPFIA2-220ENST00000550584 TSPY8P0CW00 308 aa9.53□□□□□ -0.88
PPFIA2-220ENST00000550584 EPB41P11171 864 aaKnown RBP9.53□□□□□ -0.88
PPFIA2-220ENST00000550584 C4BPBP20851 252 aa9.53□□□□□ -0.88
PPFIA2-220ENST00000550584 USP5P45974 858 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms