RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 ADD3Q9UEY8 706 aaKnown RBP15.7■□□□□ 0.1
NUP188-211ENST00000550219 ZEB2O60315 1214 aa15.69■□□□□ 0.1
NUP188-211ENST00000550219 PCP11498 1178 aaKnown RBP15.69■□□□□ 0.1
NUP188-211ENST00000550219 CDK7P50613 346 aa15.69■□□□□ 0.1
NUP188-211ENST00000550219 PPIGQ13427 754 aaKnown RBP eCLIP15.69■□□□□ 0.12e-7■■■□□ 16.4
NUP188-211ENST00000550219 MFSD5Q6N075 450 aa15.69■□□□□ 0.1
NUP188-211ENST00000550219 TAPT1Q6NXT6 567 aa15.69■□□□□ 0.1
NUP188-211ENST00000550219 MYLIPQ8WY64 445 aa15.69■□□□□ 0.1
NUP188-211ENST00000550219 CDX2Q99626 313 aaPredicted RBP15.69■□□□□ 0.1
NUP188-211ENST00000550219 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.69■□□□□ 0.15e-9■■■■□ 23.9
NUP188-211ENST00000550219 TTYH1Q9H313 450 aaPredicted RBP15.69■□□□□ 0.1
NUP188-211ENST00000550219 CPVLQ9H3G5 476 aa15.69■□□□□ 0.1
NUP188-211ENST00000550219 B4E1Z4 1266 aa15.68■□□□□ 0.1
NUP188-211ENST00000550219 EIF5BO60841 1220 aaKnown RBP15.68■□□□□ 0.1
NUP188-211ENST00000550219 KDM4AO75164 1064 aa15.68■□□□□ 0.1
NUP188-211ENST00000550219 ACRP10323 421 aa15.68■□□□□ 0.1
NUP188-211ENST00000550219 CSF2RAP15509 400 aa15.68■□□□□ 0.1
NUP188-211ENST00000550219 PSMC6P62333 389 aa15.68■□□□□ 0.1
NUP188-211ENST00000550219 ITGA7Q13683 1181 aa15.68■□□□□ 0.1
NUP188-211ENST00000550219 IQSEC1Q6DN90 963 aa15.68■□□□□ 0.1
NUP188-211ENST00000550219 RNF207Q6ZRF8 634 aa15.68■□□□□ 0.1
NUP188-211ENST00000550219 TMEM199Q8N511 208 aa15.68■□□□□ 0.1
NUP188-211ENST00000550219 CLEC4DQ8WXI8 215 aa15.68■□□□□ 0.1
NUP188-211ENST00000550219 TTC14Q96N46 770 aa15.68■□□□□ 0.1
NUP188-211ENST00000550219 LSG1Q9H089 658 aaKnown RBP15.68■□□□□ 0.1
NUP188-211ENST00000550219 SEMA6BQ9H3T3 888 aa15.68■□□□□ 0.1
NUP188-211ENST00000550219 EPB41L2O43491 1005 aaKnown RBP15.67■□□□□ 0.1
NUP188-211ENST00000550219 CABYRO75952 493 aa15.67■□□□□ 0.1
NUP188-211ENST00000550219 SNHG28P0DPA3 235 aa15.67■□□□□ 0.1
NUP188-211ENST00000550219 DNAJB2P25686 324 aa15.67■□□□□ 0.1
NUP188-211ENST00000550219 CYP2C18P33260 490 aa15.67■□□□□ 0.1
NUP188-211ENST00000550219 NKX3-2P78367 333 aa15.67■□□□□ 0.1
NUP188-211ENST00000550219 PDE4DQ08499 809 aa15.67■□□□□ 0.1
NUP188-211ENST00000550219 IQCA1Q86XH1 822 aa15.67■□□□□ 0.1
NUP188-211ENST00000550219 PNMA1Q8ND90 353 aa15.67■□□□□ 0.1
NUP188-211ENST00000550219 OR6J1Q8NGC5 347 aa15.67■□□□□ 0.1
NUP188-211ENST00000550219 DSCC1Q9BVC3 393 aa15.67■□□□□ 0.1
NUP188-211ENST00000550219 BACH2Q9BYV9 841 aa15.67■□□□□ 0.1
NUP188-211ENST00000550219 UBA5Q9GZZ9 404 aa15.67■□□□□ 0.1
NUP188-211ENST00000550219 KAT14Q9H8E8 782 aa15.67■□□□□ 0.1
NUP188-211ENST00000550219 UMODL1Q5DID0 1318 aa15.67■□□□□ 0.1
NUP188-211ENST00000550219 WDR19Q8NEZ3 1342 aa15.67■□□□□ 0.1
NUP188-211ENST00000550219 COL6A3P12111 3177 aa15.66■□□□□ 0.1
NUP188-211ENST00000550219 DHX16O60231 1041 aaKnown RBP15.66■□□□□ 0.1
NUP188-211ENST00000550219 REC8O95072 547 aa15.66■□□□□ 0.1
NUP188-211ENST00000550219 SEC24BO95487 1268 aa15.66■□□□□ 0.1
NUP188-211ENST00000550219 MYL3P08590 195 aa15.66■□□□□ 0.1
NUP188-211ENST00000550219 FOSL2P15408 326 aa15.66■□□□□ 0.1
NUP188-211ENST00000550219 RPS6P62753 249 aaKnown RBP15.66■□□□□ 0.1
NUP188-211ENST00000550219 CDC37Q16543 378 aaPredicted RBP15.66■□□□□ 0.1
NUP188-211ENST00000550219 IMMTQ16891 758 aaKnown RBP15.66■□□□□ 0.1
NUP188-211ENST00000550219 GPATCH4Q5T3I0 446 aaKnown RBP15.66■□□□□ 0.1
NUP188-211ENST00000550219 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.66■□□□□ 0.1
NUP188-211ENST00000550219 MAFAQ8NHW3 353 aaPredicted RBP15.66■□□□□ 0.1
NUP188-211ENST00000550219 MORC4Q8TE76 937 aa15.66■□□□□ 0.1
NUP188-211ENST00000550219 WDR11Q9BZH6 1224 aa15.66■□□□□ 0.1
NUP188-211ENST00000550219 HIPK3Q9H422 1215 aa15.66■□□□□ 0.1
NUP188-211ENST00000550219 PNMA2Q9UL42 364 aa15.66■□□□□ 0.1
NUP188-211ENST00000550219 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.65■□□□□ 0.1
NUP188-211ENST00000550219 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.65■□□□□ 0.1
NUP188-211ENST00000550219 B4GALT4O60513 344 aa15.65■□□□□ 0.1
NUP188-211ENST00000550219 CD4P01730 458 aa15.65■□□□□ 0.1
NUP188-211ENST00000550219 CCL23P55773 120 aa15.65■□□□□ 0.1
NUP188-211ENST00000550219 PTH1RQ03431 593 aa15.65■□□□□ 0.1
NUP188-211ENST00000550219 PPP2R5BQ15173 497 aa15.65■□□□□ 0.1
NUP188-211ENST00000550219 DUSP28Q4G0W2 176 aa15.65■□□□□ 0.1
NUP188-211ENST00000550219 TMEM240Q5SV17 173 aa15.65■□□□□ 0.1
NUP188-211ENST00000550219 PSRC1Q6PGN9 363 aaPredicted RBP15.65■□□□□ 0.1
NUP188-211ENST00000550219 MAP4K1Q92918 833 aa15.65■□□□□ 0.1
NUP188-211ENST00000550219 MPHOSPH6Q99547 160 aaKnown RBP15.65■□□□□ 0.1
NUP188-211ENST00000550219 TRPV6Q9H1D0 765 aa15.65■□□□□ 0.1
NUP188-211ENST00000550219 Q9Y3F1 56 aa15.65■□□□□ 0.1
NUP188-211ENST00000550219 GRIN2DO15399 1336 aa15.65■□□□□ 0.1
NUP188-211ENST00000550219 TNKSO95271 1327 aa15.65■□□□□ 0.1
NUP188-211ENST00000550219 GRXCR1A8MXD5 290 aa15.64■□□□□ 0.09
NUP188-211ENST00000550219 FAM47CQ5HY64 1035 aa15.64■□□□□ 0.09
NUP188-211ENST00000550219 ZNF365Q70YC5 407 aa15.64■□□□□ 0.09
NUP188-211ENST00000550219 C16orf59Q7L2K0 433 aa15.64■□□□□ 0.09
NUP188-211ENST00000550219 DGKHQ86XP1 1220 aa15.64■□□□□ 0.09
NUP188-211ENST00000550219 SLC43A3Q8NBI5 491 aa15.64■□□□□ 0.09
NUP188-211ENST00000550219 PPP1R13LQ8WUF5 828 aa15.64■□□□□ 0.09
NUP188-211ENST00000550219 TIFAQ96CG3 184 aa15.64■□□□□ 0.09
NUP188-211ENST00000550219 ZSCAN10Q96SZ4 725 aaPredicted RBP15.64■□□□□ 0.09
NUP188-211ENST00000550219 ANO2Q9NQ90 1003 aa15.64■□□□□ 0.09
NUP188-211ENST00000550219 POLR3EQ9NVU0 708 aa15.64■□□□□ 0.09
NUP188-211ENST00000550219 TMEM265A0A087WTH1 108 aa15.63■□□□□ 0.09
NUP188-211ENST00000550219 LOC102724159A0A0B4J2E5 919 aa15.63■□□□□ 0.09
NUP188-211ENST00000550219 PBX2P40425 430 aa15.63■□□□□ 0.09
NUP188-211ENST00000550219 CPT1AP50416 773 aa15.63■□□□□ 0.09
NUP188-211ENST00000550219 PWP2Q15269 919 aaKnown RBP15.63■□□□□ 0.09
NUP188-211ENST00000550219 CCDC178Q5BJE1 867 aa15.63■□□□□ 0.09
NUP188-211ENST00000550219 ENAHQ8N8S7 591 aaPredicted RBP15.63■□□□□ 0.09
NUP188-211ENST00000550219 COPS5Q92905 334 aa15.63■□□□□ 0.09
NUP188-211ENST00000550219 UBAC1Q9BSL1 405 aa15.63■□□□□ 0.09
NUP188-211ENST00000550219 USP26Q9BXU7 913 aa15.63■□□□□ 0.09
NUP188-211ENST00000550219 IL23AQ9NPF7 189 aa15.63■□□□□ 0.09
NUP188-211ENST00000550219 GPHNQ9NQX3 736 aaPredicted RBP15.63■□□□□ 0.09
NUP188-211ENST00000550219 CTNNA3Q9UI47 895 aa15.63■□□□□ 0.09
NUP188-211ENST00000550219 PARP1P09874 1014 aaKnown RBP15.62■□□□□ 0.09
NUP188-211ENST00000550219 CHMP4BP1P59074 171 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms