RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	PARP14	Q460N5	1801 aa		13.27	□□□□□ -0.28
CNOT2-223	ENST00000550160	ALDH1A1	P00352	501 aa		13.27	□□□□□ -0.29
CNOT2-223	ENST00000550160	CYP2C8	P10632	490 aa		13.27	□□□□□ -0.29
CNOT2-223	ENST00000550160	TAF1C	Q15572	869 aa	Predicted RBP	13.27	□□□□□ -0.29
CNOT2-223	ENST00000550160	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.27	□□□□□ -0.29
CNOT2-223	ENST00000550160	JAKMIP3	Q5VZ66	844 aa		13.27	□□□□□ -0.29
CNOT2-223	ENST00000550160	CYP4F22	Q6NT55	531 aa		13.27	□□□□□ -0.29
CNOT2-223	ENST00000550160	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.27	□□□□□ -0.29
CNOT2-223	ENST00000550160	IFNL1	Q8IU54	200 aa		13.27	□□□□□ -0.29
CNOT2-223	ENST00000550160	CCAR1	Q8IX12	1150 aa	Known RBP	13.27	□□□□□ -0.29
CNOT2-223	ENST00000550160	RASGRP4	Q8TDF6	673 aa		13.27	□□□□□ -0.29
CNOT2-223	ENST00000550160	TNFRSF25	Q93038	417 aa		13.27	□□□□□ -0.29
CNOT2-223	ENST00000550160	NAP1L4	Q99733	375 aa	Known RBP	13.27	□□□□□ -0.29
CNOT2-223	ENST00000550160	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.27	□□□□□ -0.29
CNOT2-223	ENST00000550160	BIN2	Q9UBW5	565 aa	Predicted RBP	13.27	□□□□□ -0.29
CNOT2-223	ENST00000550160	CEP131	Q9UPN4	1083 aa		13.27	□□□□□ -0.29
CNOT2-223	ENST00000550160		M0R2N6	131 aa		13.26	□□□□□ -0.29
CNOT2-223	ENST00000550160	NFIB	O00712	420 aa		13.26	□□□□□ -0.29
CNOT2-223	ENST00000550160	BAG4	O95429	457 aa	Known RBP	13.26	□□□□□ -0.29
CNOT2-223	ENST00000550160	BMP15	O95972	392 aa		13.26	□□□□□ -0.29
CNOT2-223	ENST00000550160	CLK2	P49760	499 aa	Known RBP	13.26	□□□□□ -0.29
CNOT2-223	ENST00000550160	DNM1	Q05193	864 aa	Known RBP	13.26	□□□□□ -0.29
CNOT2-223	ENST00000550160	RLF	Q13129	1914 aa		13.26	□□□□□ -0.29
CNOT2-223	ENST00000550160	UBE2S	Q16763	222 aa		13.26	□□□□□ -0.29
CNOT2-223	ENST00000550160	NSMF	Q6X4W1	530 aa		13.26	□□□□□ -0.29
CNOT2-223	ENST00000550160	NCAPG2	Q86XI2	1143 aa		13.26	□□□□□ -0.29
CNOT2-223	ENST00000550160	SHCBP1	Q8NEM2	672 aa		13.26	□□□□□ -0.29
CNOT2-223	ENST00000550160	GPRC5A	Q8NFJ5	357 aa		13.26	□□□□□ -0.29
CNOT2-223	ENST00000550160	CLEC4D	Q8WXI8	215 aa		13.26	□□□□□ -0.29
CNOT2-223	ENST00000550160	PTPN18	Q99952	460 aa		13.26	□□□□□ -0.29
CNOT2-223	ENST00000550160	ZFYVE28	Q9HCC9	887 aa		13.26	□□□□□ -0.29
CNOT2-223	ENST00000550160	BTBD7	Q9P203	1132 aa		13.26	□□□□□ -0.29
CNOT2-223	ENST00000550160		A0A0G2JMZ2	1700 aa		13.25	□□□□□ -0.29
CNOT2-223	ENST00000550160	PFAS	O15067	1338 aa		13.25	□□□□□ -0.29
CNOT2-223	ENST00000550160	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.25	□□□□□ -0.29
CNOT2-223	ENST00000550160	MEIS2	O14770	477 aa		13.25	□□□□□ -0.29
CNOT2-223	ENST00000550160	OPLAH	O14841	1288 aa		13.25	□□□□□ -0.29
CNOT2-223	ENST00000550160	ECM2	O94769	699 aa	Predicted RBP	13.25	□□□□□ -0.29
CNOT2-223	ENST00000550160	TAL1	P17542	331 aa	Predicted RBP	13.25	□□□□□ -0.29
CNOT2-223	ENST00000550160	PTMS	P20962	102 aa		13.25	□□□□□ -0.29
CNOT2-223	ENST00000550160	HOXA13	P31271	388 aa	Predicted RBP	13.25	□□□□□ -0.29
CNOT2-223	ENST00000550160	TM4SF4	P48230	202 aa		13.25	□□□□□ -0.29
CNOT2-223	ENST00000550160	HSD17B4	P51659	736 aa		13.25	□□□□□ -0.29
CNOT2-223	ENST00000550160	ERVK-9	P63128	1117 aa		13.25	□□□□□ -0.29
CNOT2-223	ENST00000550160	ERVK-24	P63145	666 aa		13.25	□□□□□ -0.29
CNOT2-223	ENST00000550160	GHRHR	Q02643	423 aa		13.25	□□□□□ -0.29
CNOT2-223	ENST00000550160	FAM110C	Q1W6H9	321 aa		13.25	□□□□□ -0.29
CNOT2-223	ENST00000550160	INF2	Q27J81	1249 aa		13.25	□□□□□ -0.29
CNOT2-223	ENST00000550160	MUM1L1	Q5H9M0	696 aa		13.25	□□□□□ -0.29
CNOT2-223	ENST00000550160	TTC38	Q5R3I4	469 aa		13.25	□□□□□ -0.29
CNOT2-223	ENST00000550160	FAM173B	Q6P4H8	233 aa		13.25	□□□□□ -0.29
CNOT2-223	ENST00000550160	USP17L6P	Q6QN14	398 aa		13.25	□□□□□ -0.29
CNOT2-223	ENST00000550160	RNF207	Q6ZRF8	634 aa		13.25	□□□□□ -0.29
CNOT2-223	ENST00000550160	NEK8	Q86SG6	692 aa		13.25	□□□□□ -0.29
CNOT2-223	ENST00000550160	FCHSD1	Q86WN1	690 aa		13.25	□□□□□ -0.29
CNOT2-223	ENST00000550160	ANKRD13C	Q8N6S4	541 aa		13.25	□□□□□ -0.29
CNOT2-223	ENST00000550160	TBCK	Q8TEA7	893 aa		13.25	□□□□□ -0.29
CNOT2-223	ENST00000550160	SPATA32	Q96LK8	384 aa		13.25	□□□□□ -0.29
CNOT2-223	ENST00000550160	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.25	□□□□□ -0.29
CNOT2-223	ENST00000550160	ANO3	Q9BYT9	981 aa		13.25	□□□□□ -0.29
CNOT2-223	ENST00000550160	MROH8	Q9H579	483 aa		13.25	□□□□□ -0.29
CNOT2-223	ENST00000550160	POLR3E	Q9NVU0	708 aa		13.25	□□□□□ -0.29
CNOT2-223	ENST00000550160	TMEM260	Q9NX78	707 aa		13.25	□□□□□ -0.29
CNOT2-223	ENST00000550160	RBPJL	Q9UBG7	517 aa		13.25	□□□□□ -0.29
CNOT2-223	ENST00000550160	MORF4L1	Q9UBU8	362 aa		13.25	□□□□□ -0.29
CNOT2-223	ENST00000550160	DDX11L8	A8MPP1	907 aa		13.24	□□□□□ -0.29
CNOT2-223	ENST00000550160	FIBP	O43427	364 aa		13.24	□□□□□ -0.29
CNOT2-223	ENST00000550160	CNMD	O75829	334 aa		13.24	□□□□□ -0.29
CNOT2-223	ENST00000550160	YEATS4	O95619	227 aa		13.24	□□□□□ -0.29
CNOT2-223	ENST00000550160	GCFC2	P16383	781 aa	Known RBP	13.24	□□□□□ -0.29
CNOT2-223	ENST00000550160	ATP2B1	P20020	1258 aa		13.24	□□□□□ -0.29
CNOT2-223	ENST00000550160	ORC2	Q13416	577 aa	Predicted RBP	13.24	□□□□□ -0.29
CNOT2-223	ENST00000550160	STK38	Q15208	465 aa		13.24	□□□□□ -0.29
CNOT2-223	ENST00000550160	ANO1	Q5XXA6	986 aa		13.24	□□□□□ -0.29
CNOT2-223	ENST00000550160	ANKRD35	Q8N283	1001 aa		13.24	□□□□□ -0.29
CNOT2-223	ENST00000550160	JMY	Q8N9B5	988 aa		13.24	□□□□□ -0.29
CNOT2-223	ENST00000550160	TXNRD2	Q9NNW7	524 aa		13.24	□□□□□ -0.29
CNOT2-223	ENST00000550160	RTEL1	Q9NZ71	1219 aa		13.24	□□□□□ -0.29
CNOT2-223	ENST00000550160	TFIP11	Q9UBB9	837 aa	Known RBP	13.24	□□□□□ -0.29
CNOT2-223	ENST00000550160	RIPK3	Q9Y572	518 aa		13.24	□□□□□ -0.29
CNOT2-223	ENST00000550160	ERCC3	P19447	782 aa		13.23	□□□□□ -0.29
CNOT2-223	ENST00000550160	MAP2K2	P36507	400 aa		13.23	□□□□□ -0.29
CNOT2-223	ENST00000550160	NASP	P49321	788 aa	Predicted RBP	13.23	□□□□□ -0.29
CNOT2-223	ENST00000550160	RPS6	P62753	249 aa	Known RBP	13.23	□□□□□ -0.29
CNOT2-223	ENST00000550160	CEBPZ	Q03701	1054 aa	Known RBP	13.23	□□□□□ -0.29
CNOT2-223	ENST00000550160	KCTD2	Q14681	263 aa		13.23	□□□□□ -0.29
CNOT2-223	ENST00000550160	SF3A1	Q15459	793 aa	Known RBP	13.23	□□□□□ -0.29
CNOT2-223	ENST00000550160	WDR78	Q5VTH9	848 aa		13.23	□□□□□ -0.29
CNOT2-223	ENST00000550160	KCNG4	Q8TDN1	519 aa		13.23	□□□□□ -0.29
CNOT2-223	ENST00000550160	USP28	Q96RU2	1077 aa		13.23	□□□□□ -0.29
CNOT2-223	ENST00000550160	CNPY2	Q9Y2B0	182 aa		13.23	□□□□□ -0.29
CNOT2-223	ENST00000550160	IVNS1ABP	Q9Y6Y0	642 aa		13.23	□□□□□ -0.29
CNOT2-223	ENST00000550160	COL11A1	P12107	1806 aa	Predicted RBP	13.23	□□□□□ -0.29
CNOT2-223	ENST00000550160	GOLGA6L4	A6NEF3	574 aa		13.22	□□□□□ -0.29
CNOT2-223	ENST00000550160	FAM205C	A6NFA0	338 aa		13.22	□□□□□ -0.29
CNOT2-223	ENST00000550160		B4DLN1	442 aa		13.22	□□□□□ -0.29
CNOT2-223	ENST00000550160	ADAMTS3	O15072	1205 aa		13.22	□□□□□ -0.29
CNOT2-223	ENST00000550160	CA12	O43570	354 aa		13.22	□□□□□ -0.29
CNOT2-223	ENST00000550160	TLR2	O60603	784 aa		13.22	□□□□□ -0.29
CNOT2-223	ENST00000550160	FCER1A	P12319	257 aa		13.22	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms