RNA–Protein interactions for RNA: ENST00000550144.1

CTDSP2-206, Transcript of CTD small phosphatase 2, humanhuman

TSL 4

Gene CTDSP2, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-206ENST00000550144 PPP6R2O75170 966 aa13.15□□□□□ -0.3
CTDSP2-206ENST00000550144 MCM7P33993 719 aa13.15□□□□□ -0.3
CTDSP2-206ENST00000550144 ZNF157P51786 506 aaPredicted RBP13.15□□□□□ -0.3
CTDSP2-206ENST00000550144 TMEM132BQ14DG7 1078 aa13.15□□□□□ -0.3
CTDSP2-206ENST00000550144 ZNF174Q15697 407 aa13.15□□□□□ -0.3
CTDSP2-206ENST00000550144 TKFCQ3LXA3 575 aa13.15□□□□□ -0.3
CTDSP2-206ENST00000550144 TPRNQ4KMQ1 711 aa13.15□□□□□ -0.3
CTDSP2-206ENST00000550144 SNRNP48Q6IEG0 339 aaKnown RBP13.15□□□□□ -0.3
CTDSP2-206ENST00000550144 LBX2Q6XYB7 198 aa13.15□□□□□ -0.3
CTDSP2-206ENST00000550144 SAPCD2Q86UD0 394 aa13.15□□□□□ -0.3
CTDSP2-206ENST00000550144 SAMD3Q8N6K7 520 aa13.15□□□□□ -0.3
CTDSP2-206ENST00000550144 CLEC4DQ8WXI8 215 aa13.15□□□□□ -0.3
CTDSP2-206ENST00000550144 MS4A4AQ96JQ5 239 aa13.15□□□□□ -0.3
CTDSP2-206ENST00000550144 PGBD1Q96JS3 809 aa13.15□□□□□ -0.3
CTDSP2-206ENST00000550144 TRERF1Q96PN7 1200 aa13.15□□□□□ -0.3
CTDSP2-206ENST00000550144 ANO3Q9BYT9 981 aa13.15□□□□□ -0.3
CTDSP2-206ENST00000550144 PNMA3Q9UL41 463 aa13.15□□□□□ -0.3
CTDSP2-206ENST00000550144 ZNF214Q9UL59 606 aaPredicted RBP13.15□□□□□ -0.3
CTDSP2-206ENST00000550144 SLC45A1Q9Y2W3 748 aa13.15□□□□□ -0.3
CTDSP2-206ENST00000550144 MARCKSP29966 332 aaPredicted RBP13.14□□□□□ -0.31
CTDSP2-206ENST00000550144 HOXA13P31271 388 aaPredicted RBP13.14□□□□□ -0.31
CTDSP2-206ENST00000550144 STAT3P40763 770 aa13.14□□□□□ -0.31
CTDSP2-206ENST00000550144 HERVK_113P62684 666 aa13.14□□□□□ -0.31
CTDSP2-206ENST00000550144 ORC2Q13416 577 aaPredicted RBP13.14□□□□□ -0.31
CTDSP2-206ENST00000550144 PLS1Q14651 629 aa13.14□□□□□ -0.31
CTDSP2-206ENST00000550144 KLHL40Q2TBA0 621 aa13.14□□□□□ -0.31
CTDSP2-206ENST00000550144 LETM2Q2VYF4 491 aa13.14□□□□□ -0.31
CTDSP2-206ENST00000550144 RGMBQ6NW40 437 aa13.14□□□□□ -0.31
CTDSP2-206ENST00000550144 ANKRD23Q86SG2 305 aa13.14□□□□□ -0.31
CTDSP2-206ENST00000550144 RASAL3Q86YV0 1011 aa13.14□□□□□ -0.31
CTDSP2-206ENST00000550144 NAP1L4Q99733 375 aaKnown RBP13.14□□□□□ -0.31
CTDSP2-206ENST00000550144 EHMT1Q9H9B1 1298 aa13.14□□□□□ -0.31
CTDSP2-206ENST00000550144 HOMER2Q9NSB8 354 aa13.14□□□□□ -0.31
CTDSP2-206ENST00000550144 RNF146Q9NTX7 359 aa13.14□□□□□ -0.31
CTDSP2-206ENST00000550144 MAP3K20Q9NYL2 800 aaKnown RBP13.14□□□□□ -0.31
CTDSP2-206ENST00000550144 PCDHA7Q9UN72 937 aa13.14□□□□□ -0.31
CTDSP2-206ENST00000550144 TLL2Q9Y6L7 1015 aa13.14□□□□□ -0.31
CTDSP2-206ENST00000550144 MORC2Q9Y6X9 1032 aaPredicted RBP13.14□□□□□ -0.31
CTDSP2-206ENST00000550144 PDHXO00330 501 aa13.13□□□□□ -0.31
CTDSP2-206ENST00000550144 NFIBO00712 420 aa13.13□□□□□ -0.31
CTDSP2-206ENST00000550144 WNT7AO00755 349 aa13.13□□□□□ -0.31
CTDSP2-206ENST00000550144 CCNT1O60563 726 aaKnown RBP13.13□□□□□ -0.31
CTDSP2-206ENST00000550144 CUTAO60888 179 aa13.13□□□□□ -0.31
CTDSP2-206ENST00000550144 HSD17B4P51659 736 aa13.13□□□□□ -0.31
CTDSP2-206ENST00000550144 ATP2C1P98194 919 aaPredicted RBP13.13□□□□□ -0.31
CTDSP2-206ENST00000550144 GHRHRQ02643 423 aa13.13□□□□□ -0.31
CTDSP2-206ENST00000550144 FSTL1Q12841 308 aa13.13□□□□□ -0.31
CTDSP2-206ENST00000550144 MUM1L1Q5H9M0 696 aa13.13□□□□□ -0.31
CTDSP2-206ENST00000550144 ADALQ6DHV7 355 aa13.13□□□□□ -0.31
CTDSP2-206ENST00000550144 FCHSD1Q86WN1 690 aa13.13□□□□□ -0.31
CTDSP2-206ENST00000550144 KRI1Q8N9T8 703 aaKnown RBP13.13□□□□□ -0.31
CTDSP2-206ENST00000550144 GPT2Q8TD30 523 aa13.13□□□□□ -0.31
CTDSP2-206ENST00000550144 GTF3C2Q8WUA4 911 aaPredicted RBP13.13□□□□□ -0.31
CTDSP2-206ENST00000550144 BRI3BPQ8WY22 251 aa13.13□□□□□ -0.31
CTDSP2-206ENST00000550144 TBC1D5Q92609 795 aa13.13□□□□□ -0.31
CTDSP2-206ENST00000550144 ABT1Q9ULW3 272 aaKnown RBP13.13□□□□□ -0.31
CTDSP2-206ENST00000550144 COL11A1P12107 1806 aaPredicted RBP13.13□□□□□ -0.31
CTDSP2-206ENST00000550144 A0A0G2JMZ2 1700 aa13.13□□□□□ -0.31
CTDSP2-206ENST00000550144 A0A1W2PQ27 194 aa13.12□□□□□ -0.31
CTDSP2-206ENST00000550144 A0A1W2PQ64 194 aa13.12□□□□□ -0.31
CTDSP2-206ENST00000550144 A0A1W2PQD8 194 aa13.12□□□□□ -0.31
CTDSP2-206ENST00000550144 TMEM88BA6NKF7 163 aa13.12□□□□□ -0.31
CTDSP2-206ENST00000550144 BTBD19C9JJ37 291 aa13.12□□□□□ -0.31
CTDSP2-206ENST00000550144 LAD1O00515 517 aa13.12□□□□□ -0.31
CTDSP2-206ENST00000550144 GCFC2P16383 781 aaKnown RBP13.12□□□□□ -0.31
CTDSP2-206ENST00000550144 USP11P51784 963 aa13.12□□□□□ -0.31
CTDSP2-206ENST00000550144 PTGDRQ13258 359 aa13.12□□□□□ -0.31
CTDSP2-206ENST00000550144 CHST13Q8NET6 341 aa13.12□□□□□ -0.31
CTDSP2-206ENST00000550144 FERMT2Q96AC1 680 aa13.12□□□□□ -0.31
CTDSP2-206ENST00000550144 PAGR1Q9BTK6 254 aa13.12□□□□□ -0.31
CTDSP2-206ENST00000550144 MAF1Q9H063 256 aa13.12□□□□□ -0.31
CTDSP2-206ENST00000550144 ACAD9Q9H845 621 aa13.12□□□□□ -0.31
CTDSP2-206ENST00000550144 BTBD7Q9P203 1132 aa13.12□□□□□ -0.31
CTDSP2-206ENST00000550144 RIPK3Q9Y572 518 aa13.12□□□□□ -0.31
CTDSP2-206ENST00000550144 SRPRBQ9Y5M8 271 aaKnown RBP13.12□□□□□ -0.31
CTDSP2-206ENST00000550144 MANSC4A6NHS7 340 aaPredicted RBP13.11□□□□□ -0.31
CTDSP2-206ENST00000550144 NEMFO60524 1076 aa13.11□□□□□ -0.31
CTDSP2-206ENST00000550144 SLC10A3P09131 477 aa13.11□□□□□ -0.31
CTDSP2-206ENST00000550144 PTPREP23469 700 aa13.11□□□□□ -0.31
CTDSP2-206ENST00000550144 COPB2P35606 906 aa13.11□□□□□ -0.31
CTDSP2-206ENST00000550144 SREBF1P36956 1147 aa13.11□□□□□ -0.31
CTDSP2-206ENST00000550144 ARHGAP4P98171 946 aa13.11□□□□□ -0.31
CTDSP2-206ENST00000550144 AXDND1Q5T1B0 1012 aaPredicted RBP13.11□□□□□ -0.31
CTDSP2-206ENST00000550144 ARL6IP4Q66PJ3 421 aaKnown RBP13.11□□□□□ -0.31
CTDSP2-206ENST00000550144 PPP4R3AQ6IN85 833 aa13.11□□□□□ -0.31
CTDSP2-206ENST00000550144 POTEEQ6S8J3 1075 aa13.11□□□□□ -0.31
CTDSP2-206ENST00000550144 NSMFQ6X4W1 530 aa13.11□□□□□ -0.31
CTDSP2-206ENST00000550144 RNF207Q6ZRF8 634 aa13.11□□□□□ -0.31
CTDSP2-206ENST00000550144 RIOX2Q8IUF8 465 aa13.11□□□□□ -0.31
CTDSP2-206ENST00000550144 CCAR1Q8IX12 1150 aaKnown RBP13.11□□□□□ -0.31
CTDSP2-206ENST00000550144 SMCR8Q8TEV9 937 aaPredicted RBP13.11□□□□□ -0.31
CTDSP2-206ENST00000550144 CCDC102AQ96A19 550 aa13.11□□□□□ -0.31
CTDSP2-206ENST00000550144 SPATC1LQ9H0A9 340 aa13.11□□□□□ -0.31
CTDSP2-206ENST00000550144 FBXO40Q9UH90 709 aa13.11□□□□□ -0.31
CTDSP2-206ENST00000550144 FBXO2Q9UK22 296 aaPredicted RBP13.11□□□□□ -0.31
CTDSP2-206ENST00000550144 RABGAP1Q9Y3P9 1069 aa13.11□□□□□ -0.31
CTDSP2-206ENST00000550144 RBBP6Q7Z6E9 1792 aaKnown RBP13.11□□□□□ -0.31
CTDSP2-206ENST00000550144 TESPA1A2RU30 521 aaPredicted RBP13.1□□□□□ -0.31
CTDSP2-206ENST00000550144 CNMDO75829 334 aa13.1□□□□□ -0.31
CTDSP2-206ENST00000550144 TDP2O95551 362 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms