RNA–Protein interactions for RNA: ENST00000549995.1

PFDN5-208, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-208ENST00000549995 ADD1P35611 737 aaKnown RBP13.78□□□□□ -0.2
PFDN5-208ENST00000549995 RGS19P49795 217 aa13.78□□□□□ -0.2
PFDN5-208ENST00000549995 AK2P54819 239 aa13.78□□□□□ -0.2
PFDN5-208ENST00000549995 RPS6P62753 249 aaKnown RBP13.78□□□□□ -0.2
PFDN5-208ENST00000549995 CNTN2Q02246 1040 aa13.78□□□□□ -0.2
PFDN5-208ENST00000549995 BAATQ14032 418 aaPredicted RBP13.78□□□□□ -0.2
PFDN5-208ENST00000549995 USH1GQ495M9 461 aa13.78□□□□□ -0.2
PFDN5-208ENST00000549995 SLC30A10Q6XR72 485 aa13.78□□□□□ -0.2
PFDN5-208ENST00000549995 RNF207Q6ZRF8 634 aa13.78□□□□□ -0.2
PFDN5-208ENST00000549995 HOMER1Q86YM7 354 aa13.78□□□□□ -0.2
PFDN5-208ENST00000549995 RAB11FIP4Q86YS3 637 aa13.78□□□□□ -0.2
PFDN5-208ENST00000549995 CCDC144CPQ8IYA2 1237 aa13.78□□□□□ -0.2
PFDN5-208ENST00000549995 TRPV1Q8NER1 839 aa13.78□□□□□ -0.2
PFDN5-208ENST00000549995 TBC1D32Q96NH3 1257 aa13.78□□□□□ -0.2
PFDN5-208ENST00000549995 UNC93B1Q9H1C4 597 aa13.78□□□□□ -0.2
PFDN5-208ENST00000549995 RBM27Q9P2N5 1060 aaKnown RBP13.78□□□□□ -0.2
PFDN5-208ENST00000549995 PCDHA1Q9Y5I3 950 aa13.78□□□□□ -0.2
PFDN5-208ENST00000549995 PIK3CDO00329 1044 aa13.77□□□□□ -0.21
PFDN5-208ENST00000549995 PRPF3O43395 683 aaKnown RBP13.77□□□□□ -0.21
PFDN5-208ENST00000549995 PFKFB2O60825 505 aa13.77□□□□□ -0.21
PFDN5-208ENST00000549995 SNAI1O95863 264 aaPredicted RBP13.77□□□□□ -0.21
PFDN5-208ENST00000549995 ZNF865P0CJ78 1059 aaPredicted RBP13.77□□□□□ -0.21
PFDN5-208ENST00000549995 CYP2C19P33261 490 aa13.77□□□□□ -0.21
PFDN5-208ENST00000549995 GJA8P48165 433 aa13.77□□□□□ -0.21
PFDN5-208ENST00000549995 ALDH5A1P51649 535 aaPredicted RBP13.77□□□□□ -0.21
PFDN5-208ENST00000549995 NSMFQ6X4W1 530 aa13.77□□□□□ -0.21
PFDN5-208ENST00000549995 CMTR1Q8N1G2 835 aaKnown RBP13.77□□□□□ -0.21
PFDN5-208ENST00000549995 SYTL5Q8TDW5 730 aaPredicted RBP13.77□□□□□ -0.21
PFDN5-208ENST00000549995 SHISA4Q96DD7 197 aa13.77□□□□□ -0.21
PFDN5-208ENST00000549995 RNF26Q9BY78 433 aaPredicted RBP13.77□□□□□ -0.21
PFDN5-208ENST00000549995 HMX1Q9NP08 348 aaPredicted RBP13.77□□□□□ -0.21
PFDN5-208ENST00000549995 ADD3Q9UEY8 706 aaKnown RBP13.77□□□□□ -0.21
PFDN5-208ENST00000549995 SEC63Q9UGP8 760 aaKnown RBP13.77□□□□□ -0.21
PFDN5-208ENST00000549995 TPCN1Q9ULQ1 816 aa13.77□□□□□ -0.21
PFDN5-208ENST00000549995 STK36Q9NRP7 1315 aa13.76□□□□□ -0.21
PFDN5-208ENST00000549995 ASB14A6NK59 587 aa13.76□□□□□ -0.21
PFDN5-208ENST00000549995 MSCO60682 206 aa13.76□□□□□ -0.21
PFDN5-208ENST00000549995 PKN1Q16512 942 aa13.76□□□□□ -0.21
PFDN5-208ENST00000549995 PFKFB3Q16875 520 aaPredicted RBP13.76□□□□□ -0.21
PFDN5-208ENST00000549995 LHX8Q68G74 356 aa13.76□□□□□ -0.21
PFDN5-208ENST00000549995 ARMCX2Q7L311 632 aa13.76□□□□□ -0.21
PFDN5-208ENST00000549995 UBE2Q1Q7Z7E8 422 aa13.76□□□□□ -0.21
PFDN5-208ENST00000549995 FAM177A1Q8N128 213 aaPredicted RBP13.76□□□□□ -0.21
PFDN5-208ENST00000549995 TBC1D5Q92609 795 aa13.76□□□□□ -0.21
PFDN5-208ENST00000549995 ABHD16BQ9H3Z7 469 aa13.76□□□□□ -0.21
PFDN5-208ENST00000549995 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.76□□□□□ -0.21
PFDN5-208ENST00000549995 COL20A1Q9P218 1284 aa13.76□□□□□ -0.21
PFDN5-208ENST00000549995 RBM47A0AV96 593 aaKnown RBP13.75□□□□□ -0.21
PFDN5-208ENST00000549995 ESYT2A0FGR8 921 aa13.75□□□□□ -0.21
PFDN5-208ENST00000549995 PTPDC1A2A3K4 754 aa13.75□□□□□ -0.21
PFDN5-208ENST00000549995 SEPT4O43236 478 aa13.75□□□□□ -0.21
PFDN5-208ENST00000549995 SGPL1O95470 568 aa13.75□□□□□ -0.21
PFDN5-208ENST00000549995 CCND3P30281 292 aaPredicted RBP13.75□□□□□ -0.21
PFDN5-208ENST00000549995 SLC4A3P48751 1232 aa13.75□□□□□ -0.21
PFDN5-208ENST00000549995 NEK4P51957 841 aa13.75□□□□□ -0.21
PFDN5-208ENST00000549995 NKX3-2P78367 333 aa13.75□□□□□ -0.21
PFDN5-208ENST00000549995 RABEP1Q15276 862 aa13.75□□□□□ -0.21
PFDN5-208ENST00000549995 WWC2Q6AWC2 1192 aa13.75□□□□□ -0.21
PFDN5-208ENST00000549995 ANKLE1Q8NAG6 615 aa13.75□□□□□ -0.21
PFDN5-208ENST00000549995 RNF208Q9H0X6 261 aa13.75□□□□□ -0.21
PFDN5-208ENST00000549995 UPF2Q9HAU5 1272 aaKnown RBP13.75□□□□□ -0.21
PFDN5-208ENST00000549995 BARHL2Q9NY43 387 aa13.75□□□□□ -0.21
PFDN5-208ENST00000549995 OGDHLQ9ULD0 1010 aa13.75□□□□□ -0.21
PFDN5-208ENST00000549995 POTEFA5A3E0 1075 aa13.74□□□□□ -0.21
PFDN5-208ENST00000549995 CCDC85CA6NKD9 419 aa13.74□□□□□ -0.21
PFDN5-208ENST00000549995 STXBP3O00186 592 aa13.74□□□□□ -0.21
PFDN5-208ENST00000549995 MEIS2O14770 477 aa13.74□□□□□ -0.21
PFDN5-208ENST00000549995 SCG2P13521 617 aa13.74□□□□□ -0.21
PFDN5-208ENST00000549995 SCRN1Q12765 414 aa13.74□□□□□ -0.21
PFDN5-208ENST00000549995 TYW1BQ6NUM6 668 aa13.74□□□□□ -0.21
PFDN5-208ENST00000549995 U2AF1L4Q8WU68 220 aaKnown RBP13.74□□□□□ -0.21
PFDN5-208ENST00000549995 GTF3C6Q969F1 213 aa13.74□□□□□ -0.21
PFDN5-208ENST00000549995 IWS1Q96ST2 819 aa13.74□□□□□ -0.21
PFDN5-208ENST00000549995 TMEM106CQ9BVX2 250 aa13.74□□□□□ -0.21
PFDN5-208ENST00000549995 VTA1Q9NP79 307 aa13.74□□□□□ -0.21
PFDN5-208ENST00000549995 BIN2Q9UBW5 565 aaPredicted RBP13.74□□□□□ -0.21
PFDN5-208ENST00000549995 DDX20Q9UHI6 824 aaKnown RBP13.74□□□□□ -0.21
PFDN5-208ENST00000549995 ALPK3Q96L96 1907 aa13.74□□□□□ -0.21
PFDN5-208ENST00000549995 AKR1A1P14550 325 aa13.73□□□□□ -0.21
PFDN5-208ENST00000549995 CALML3P27482 149 aa13.73□□□□□ -0.21
PFDN5-208ENST00000549995 MNX1P50219 401 aaPredicted RBP13.73□□□□□ -0.21
PFDN5-208ENST00000549995 ST3GAL1Q11201 340 aa13.73□□□□□ -0.21
PFDN5-208ENST00000549995 ACVR2BQ13705 512 aa13.73□□□□□ -0.21
PFDN5-208ENST00000549995 ME3Q16798 604 aa13.73□□□□□ -0.21
PFDN5-208ENST00000549995 NSUN6Q8TEA1 469 aaKnown RBP13.73□□□□□ -0.21
PFDN5-208ENST00000549995 PURBQ96QR8 312 aaKnown RBP13.73□□□□□ -0.21
PFDN5-208ENST00000549995 NCOA5Q9HCD5 579 aaKnown RBP13.73□□□□□ -0.21
PFDN5-208ENST00000549995 V9GY48 417 aaPredicted RBP13.73□□□□□ -0.21
PFDN5-208ENST00000549995 hCG_1642624A0A1W2PR95 340 aa13.72□□□□□ -0.21
PFDN5-208ENST00000549995 GCOM1H8Y6P7 765 aaPredicted RBP13.72□□□□□ -0.21
PFDN5-208ENST00000549995 LARGE1O95461 756 aa13.72□□□□□ -0.21
PFDN5-208ENST00000549995 CFBP00751 764 aa13.72□□□□□ -0.21
PFDN5-208ENST00000549995 POLR2MP0CAP2 368 aa13.72□□□□□ -0.21
PFDN5-208ENST00000549995 CLK2P49760 499 aaKnown RBP13.72□□□□□ -0.21
PFDN5-208ENST00000549995 CCT2P78371 535 aaKnown RBP13.72□□□□□ -0.21
PFDN5-208ENST00000549995 TAPT1Q6NXT6 567 aa13.72□□□□□ -0.21
PFDN5-208ENST00000549995 CCDC82Q8N4S0 544 aa13.72□□□□□ -0.21
PFDN5-208ENST00000549995 DEFB118Q96PH6 123 aa13.72□□□□□ -0.21
PFDN5-208ENST00000549995 TAAR1Q96RJ0 339 aa13.72□□□□□ -0.21
PFDN5-208ENST00000549995 MPHOSPH6Q99547 160 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms