RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 SLC6A18Q96N87 628 aa6.2□□□□□ -1.42
CBX5-203ENST00000547872 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.2□□□□□ -1.42
CBX5-203ENST00000547872 MKRN2Q9H000 416 aaKnown RBP6.2□□□□□ -1.42
CBX5-203ENST00000547872 ASCC2Q9H1I8 757 aaPredicted RBP6.2□□□□□ -1.42
CBX5-203ENST00000547872 TRIT1Q9H3H1 467 aaKnown RBP6.2□□□□□ -1.42
CBX5-203ENST00000547872 PRDM11Q9NQV5 511 aa6.2□□□□□ -1.42
CBX5-203ENST00000547872 ST14Q9Y5Y6 855 aa6.2□□□□□ -1.42
CBX5-203ENST00000547872 PPLO60437 1756 aa6.2□□□□□ -1.42
CBX5-203ENST00000547872 PITPNM2Q9BZ72 1349 aa6.2□□□□□ -1.42
CBX5-203ENST00000547872 ARHGEF10O15013 1369 aa6.19□□□□□ -1.42
CBX5-203ENST00000547872 PARD3Q8TEW0 1356 aa6.19□□□□□ -1.42
CBX5-203ENST00000547872 LRRN2O75325 713 aa6.19□□□□□ -1.42
CBX5-203ENST00000547872 ACRP10323 421 aa6.19□□□□□ -1.42
CBX5-203ENST00000547872 CD8BP10966 210 aa6.19□□□□□ -1.42
CBX5-203ENST00000547872 DNAJA1P31689 397 aaKnown RBP6.19□□□□□ -1.42
CBX5-203ENST00000547872 CD96P40200 585 aa6.19□□□□□ -1.42
CBX5-203ENST00000547872 ZC3H6P61129 1189 aaKnown RBP6.19□□□□□ -1.42
CBX5-203ENST00000547872 THAP5Q7Z6K1 395 aa6.19□□□□□ -1.42
CBX5-203ENST00000547872 UBE2FQ969M7 185 aa6.19□□□□□ -1.42
CBX5-203ENST00000547872 ANAPC16Q96DE5 110 aa6.19□□□□□ -1.42
CBX5-203ENST00000547872 ZNF512BQ96KM6 892 aaPredicted RBP6.19□□□□□ -1.42
CBX5-203ENST00000547872 SYT17Q9BSW7 474 aa6.19□□□□□ -1.42
CBX5-203ENST00000547872 PAK6Q9NQU5 681 aaPredicted RBP6.19□□□□□ -1.42
CBX5-203ENST00000547872 GPATCH2Q9NW75 528 aa6.19□□□□□ -1.42
CBX5-203ENST00000547872 ZSWIM5Q9P217 1185 aa6.19□□□□□ -1.42
CBX5-203ENST00000547872 SLC12A7Q9Y666 1083 aa6.19□□□□□ -1.42
CBX5-203ENST00000547872 PHRF1Q9P1Y6 1649 aaKnown RBP6.18□□□□□ -1.42
CBX5-203ENST00000547872 EVA1CP58658 441 aa6.18□□□□□ -1.42
CBX5-203ENST00000547872 PLCL1Q15111 1095 aa6.18□□□□□ -1.42
CBX5-203ENST00000547872 PPP2R5EQ16537 467 aa6.18□□□□□ -1.42
CBX5-203ENST00000547872 CLEC16AQ2KHT3 1053 aa6.18□□□□□ -1.42
CBX5-203ENST00000547872 NBPF12Q5TAG4 269 aaPredicted RBP6.18□□□□□ -1.42
CBX5-203ENST00000547872 SPRED2Q7Z698 418 aa6.18□□□□□ -1.42
CBX5-203ENST00000547872 NPM2Q86SE8 214 aaKnown RBP6.18□□□□□ -1.42
CBX5-203ENST00000547872 TMEM192Q8IY95 271 aa6.18□□□□□ -1.42
CBX5-203ENST00000547872 SHDQ96IW2 340 aa6.18□□□□□ -1.42
CBX5-203ENST00000547872 ATP13A1Q9HD20 1204 aa6.18□□□□□ -1.42
CBX5-203ENST00000547872 SEMA3GQ9NS98 782 aa6.18□□□□□ -1.42
CBX5-203ENST00000547872 KNDC1Q76NI1 1749 aa6.18□□□□□ -1.42
CBX5-203ENST00000547872 TRPM3Q9HCF6 1732 aaPredicted RBP6.18□□□□□ -1.42
CBX5-203ENST00000547872 CRYBG1Q9Y4K1 1723 aa6.18□□□□□ -1.42
CBX5-203ENST00000547872 ALS2Q96Q42 1657 aa6.17□□□□□ -1.42
CBX5-203ENST00000547872 NRXN1Q9ULB1 1477 aa6.17□□□□□ -1.42
CBX5-203ENST00000547872 RBAK-RBAKDNI3L0D1 243 aa6.17□□□□□ -1.42
CBX5-203ENST00000547872 NAALADL2Q58DX5 795 aa6.17□□□□□ -1.42
CBX5-203ENST00000547872 UNC5AQ6ZN44 842 aa6.17□□□□□ -1.42
CBX5-203ENST00000547872 NFXL1Q6ZNB6 911 aa6.17□□□□□ -1.42
CBX5-203ENST00000547872 C19orf47Q8N9M1 422 aaKnown RBP6.17□□□□□ -1.42
CBX5-203ENST00000547872 SLC43A3Q8NBI5 491 aa6.17□□□□□ -1.42
CBX5-203ENST00000547872 VWCEQ96DN2 955 aa6.17□□□□□ -1.42
CBX5-203ENST00000547872 GPR62Q9BZJ7 368 aa6.17□□□□□ -1.42
CBX5-203ENST00000547872 SUCOQ9UBS9 1254 aaKnown RBP6.17□□□□□ -1.42
CBX5-203ENST00000547872 SPATA31A1Q5TZJ5 1347 aa6.17□□□□□ -1.42
CBX5-203ENST00000547872 KIAA0232Q92628 1395 aa6.17□□□□□ -1.42
CBX5-203ENST00000547872 TOPAZ1Q8N9V7 1692 aa6.17□□□□□ -1.42
CBX5-203ENST00000547872 RRBP1Q9P2E9 1410 aaKnown RBP6.16□□□□□ -1.42
CBX5-203ENST00000547872 LOC105371045A0A1W2PR82 267 aa6.16□□□□□ -1.42
CBX5-203ENST00000547872 FUT4P22083 530 aa6.16□□□□□ -1.42
CBX5-203ENST00000547872 TPP2P29144 1249 aaPredicted RBP6.16□□□□□ -1.42
CBX5-203ENST00000547872 PMS1P54277 932 aaKnown RBP6.16□□□□□ -1.42
CBX5-203ENST00000547872 ZP2Q05996 745 aa6.16□□□□□ -1.42
CBX5-203ENST00000547872 ZYXQ15942 572 aaKnown RBP6.16□□□□□ -1.42
CBX5-203ENST00000547872 RGL3Q3MIN7 710 aa6.16□□□□□ -1.42
CBX5-203ENST00000547872 BBS9Q3SYG4 887 aa6.16□□□□□ -1.42
CBX5-203ENST00000547872 TDRD10Q5VZ19 366 aaKnown RBP6.16□□□□□ -1.42
CBX5-203ENST00000547872 PTF1AQ7RTS3 328 aa6.16□□□□□ -1.42
CBX5-203ENST00000547872 TMPRSS7Q7RTY8 843 aa6.16□□□□□ -1.42
CBX5-203ENST00000547872 TTC6Q86TZ1 520 aa6.16□□□□□ -1.42
CBX5-203ENST00000547872 CCDC144CPQ8IYA2 1237 aa6.16□□□□□ -1.42
CBX5-203ENST00000547872 ABI1Q8IZP0 508 aa6.16□□□□□ -1.42
CBX5-203ENST00000547872 SMARCC1Q92922 1105 aaPredicted RBP6.16□□□□□ -1.42
CBX5-203ENST00000547872 HIRIP3Q9BW71 556 aaPredicted RBP6.16□□□□□ -1.42
CBX5-203ENST00000547872 DUSP15Q9H1R2 295 aaPredicted RBP6.16□□□□□ -1.42
CBX5-203ENST00000547872 FBXL21Q9UKT6 434 aa6.16□□□□□ -1.42
CBX5-203ENST00000547872 MRVI1Q9Y6F6 885 aa6.16□□□□□ -1.42
CBX5-203ENST00000547872 OAS3Q9Y6K5 1087 aaKnown RBP6.16□□□□□ -1.42
CBX5-203ENST00000547872 LRRC37A3O60309 1634 aa6.16□□□□□ -1.42
CBX5-203ENST00000547872 SBNO1A3KN83 1393 aa6.16□□□□□ -1.42
CBX5-203ENST00000547872 NMIQ13287 307 aaPredicted RBP6.15□□□□□ -1.42
CBX5-203ENST00000547872 NBPF9Q3BBW0 867 aa6.15□□□□□ -1.42
CBX5-203ENST00000547872 TSPYL5Q86VY4 417 aaPredicted RBP6.15□□□□□ -1.42
CBX5-203ENST00000547872 WFDC3Q8IUB2 231 aa6.15□□□□□ -1.42
CBX5-203ENST00000547872 PI4K2BQ8TCG2 481 aa6.15□□□□□ -1.42
CBX5-203ENST00000547872 CARS2Q9HA77 564 aaKnown RBP6.15□□□□□ -1.42
CBX5-203ENST00000547872 STK32BQ9NY57 414 aa6.15□□□□□ -1.42
CBX5-203ENST00000547872 DUSP13Q9UII6 198 aa6.15□□□□□ -1.42
CBX5-203ENST00000547872 PCDHB12Q9Y5F1 795 aa6.15□□□□□ -1.42
CBX5-203ENST00000547872 ADGRF5Q8IZF2 1346 aa6.15□□□□□ -1.43
CBX5-203ENST00000547872 ATP10DQ9P241 1426 aa6.15□□□□□ -1.43
CBX5-203ENST00000547872 AKAP12Q02952 1782 aa6.14□□□□□ -1.43
CBX5-203ENST00000547872 A0A1W2PQH9 124 aa6.14□□□□□ -1.43
CBX5-203ENST00000547872 SHISA3A0PJX4 238 aa6.14□□□□□ -1.43
CBX5-203ENST00000547872 TP53P04637 393 aaPredicted RBP6.14□□□□□ -1.43
CBX5-203ENST00000547872 FGRP09769 529 aa6.14□□□□□ -1.43
CBX5-203ENST00000547872 SRFP11831 508 aa6.14□□□□□ -1.43
CBX5-203ENST00000547872 TNNI3KQ59H18 835 aa6.14□□□□□ -1.43
CBX5-203ENST00000547872 CREG2Q8IUH2 290 aa6.14□□□□□ -1.43
CBX5-203ENST00000547872 FAM169BQ8N8A8 192 aa6.14□□□□□ -1.43
CBX5-203ENST00000547872 PHAXQ9H814 394 aaKnown RBP6.14□□□□□ -1.43
CBX5-203ENST00000547872 FAM86C1Q9NVL1 165 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms