RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 CABYRO75952 493 aa23.94■■□□□ 1.42
SSH1-207ENST00000547862 CD4P01730 458 aa23.94■■□□□ 1.42
SSH1-207ENST00000547862 PBX2P40425 430 aa23.94■■□□□ 1.42
SSH1-207ENST00000547862 CCL23P55773 120 aa23.94■■□□□ 1.42
SSH1-207ENST00000547862 IQSEC1Q6DN90 963 aa23.94■■□□□ 1.42
SSH1-207ENST00000547862 TRPV6Q9H1D0 765 aa23.94■■□□□ 1.42
SSH1-207ENST00000547862 TCP11L1Q9NUJ3 509 aa23.94■■□□□ 1.42
SSH1-207ENST00000547862 SCN5AQ14524 2016 aa23.93■■□□□ 1.42
SSH1-207ENST00000547862 GRIN2DO15399 1336 aa23.93■■□□□ 1.42
SSH1-207ENST00000547862 B4GALT4O60513 344 aa23.93■■□□□ 1.42
SSH1-207ENST00000547862 GOLGA8HP0CJ92 632 aa23.93■■□□□ 1.42
SSH1-207ENST00000547862 ZNF543Q08ER8 600 aa23.93■■□□□ 1.42
SSH1-207ENST00000547862 USH1GQ495M9 461 aa23.93■■□□□ 1.42
SSH1-207ENST00000547862 RNF207Q6ZRF8 634 aa23.93■■□□□ 1.42
SSH1-207ENST00000547862 CPVLQ9H3G5 476 aa23.93■■□□□ 1.42
SSH1-207ENST00000547862 ZNF576Q9H609 170 aa23.93■■□□□ 1.42
SSH1-207ENST00000547862 MYL3P08590 195 aa23.92■■□□□ 1.42
SSH1-207ENST00000547862 SDSP20132 328 aa23.92■■□□□ 1.42
SSH1-207ENST00000547862 OR6J1Q8NGC5 347 aa23.92■■□□□ 1.42
SSH1-207ENST00000547862 PBX4Q9BYU1 374 aa23.92■■□□□ 1.42
SSH1-207ENST00000547862 WDR11Q9BZH6 1224 aa23.92■■□□□ 1.42
SSH1-207ENST00000547862 IL23AQ9NPF7 189 aa23.92■■□□□ 1.42
SSH1-207ENST00000547862 MFAP1P55081 439 aaKnown RBP23.91■■□□□ 1.42
SSH1-207ENST00000547862 PDE4DQ08499 809 aa23.91■■□□□ 1.42
SSH1-207ENST00000547862 DUSP28Q4G0W2 176 aa23.91■■□□□ 1.42
SSH1-207ENST00000547862 CWC27Q6UX04 472 aaKnown RBP23.91■■□□□ 1.42
SSH1-207ENST00000547862 SLC43A3Q8NBI5 491 aa23.91■■□□□ 1.42
SSH1-207ENST00000547862 MORC4Q8TE76 937 aa23.91■■□□□ 1.42
SSH1-207ENST00000547862 PPP1R13LQ8WUF5 828 aa23.91■■□□□ 1.42
SSH1-207ENST00000547862 CLEC4DQ8WXI8 215 aa23.91■■□□□ 1.42
SSH1-207ENST00000547862 ESR2Q92731 530 aa23.91■■□□□ 1.42
SSH1-207ENST00000547862 RNF41Q9H4P4 317 aaPredicted RBP23.91■■□□□ 1.42
SSH1-207ENST00000547862 DIAPH3Q9NSV4 1193 aa23.91■■□□□ 1.42
SSH1-207ENST00000547862 TANC1Q9C0D5 1861 aa23.91■■□□□ 1.42
SSH1-207ENST00000547862 RWDD1Q9H446 243 aaPredicted RBP23.9■■□□□ 1.42
SSH1-207ENST00000547862 MYO9BQ13459 2157 aa23.89■■□□□ 1.42
SSH1-207ENST00000547862 ZNF213O14771 459 aa23.89■■□□□ 1.41
SSH1-207ENST00000547862 RPS6P62753 249 aaKnown RBP23.89■■□□□ 1.41
SSH1-207ENST00000547862 PPP2R5BQ15173 497 aa23.89■■□□□ 1.41
SSH1-207ENST00000547862 FAM47CQ5HY64 1035 aa23.89■■□□□ 1.41
SSH1-207ENST00000547862 OTOP2Q7RTS6 562 aa23.89■■□□□ 1.41
SSH1-207ENST00000547862 CHD1LQ86WJ1 897 aa23.89■■□□□ 1.41
SSH1-207ENST00000547862 SMC5Q8IY18 1101 aa23.89■■□□□ 1.41
SSH1-207ENST00000547862 NOC4LQ9BVI4 516 aaKnown RBP23.89■■□□□ 1.41
SSH1-207ENST00000547862 UBA5Q9GZZ9 404 aa23.89■■□□□ 1.41
SSH1-207ENST00000547862 WNT8AQ9H1J5 351 aa23.89■■□□□ 1.41
SSH1-207ENST00000547862 CXXC1Q9P0U4 656 aaPredicted RBP23.89■■□□□ 1.41
SSH1-207ENST00000547862 Q9Y3F1 56 aa23.89■■□□□ 1.41
SSH1-207ENST00000547862 KDM4AO75164 1064 aa23.88■■□□□ 1.41
SSH1-207ENST00000547862 PCP11498 1178 aaKnown RBP23.88■■□□□ 1.41
SSH1-207ENST00000547862 PLEKHM2Q8IWE5 1019 aa23.88■■□□□ 1.41
SSH1-207ENST00000547862 USP38Q8NB14 1042 aa23.88■■□□□ 1.41
SSH1-207ENST00000547862 PPM1EQ8WY54 764 aa23.88■■□□□ 1.41
SSH1-207ENST00000547862 COPS5Q92905 334 aa23.88■■□□□ 1.41
SSH1-207ENST00000547862 SCLYQ96I15 445 aa23.88■■□□□ 1.41
SSH1-207ENST00000547862 MTIF3Q9H2K0 278 aaKnown RBP23.88■■□□□ 1.41
SSH1-207ENST00000547862 TRMT13Q9NUP7 481 aaKnown RBP23.88■■□□□ 1.41
SSH1-207ENST00000547862 POLR3EQ9NVU0 708 aa23.88■■□□□ 1.41
SSH1-207ENST00000547862 SCN10AQ9Y5Y9 1956 aa23.88■■□□□ 1.41
SSH1-207ENST00000547862 KIAA1217Q5T5P2 1943 aa23.88■■□□□ 1.41
SSH1-207ENST00000547862 WDR19Q8NEZ3 1342 aa23.87■■□□□ 1.41
SSH1-207ENST00000547862 B4E1Z4 1266 aa23.87■■□□□ 1.41
SSH1-207ENST00000547862 IGHDP01880 384 aa23.87■■□□□ 1.41
SSH1-207ENST00000547862 FGBP02675 491 aa23.87■■□□□ 1.41
SSH1-207ENST00000547862 SNHG28P0DPA3 235 aa23.87■■□□□ 1.41
SSH1-207ENST00000547862 CYP2C9P11712 490 aa23.87■■□□□ 1.41
SSH1-207ENST00000547862 CPT1AP50416 773 aa23.87■■□□□ 1.41
SSH1-207ENST00000547862 CHMP4BP1P59074 171 aa23.87■■□□□ 1.41
SSH1-207ENST00000547862 RASIP1Q5U651 963 aa23.87■■□□□ 1.41
SSH1-207ENST00000547862 TTC14Q96N46 770 aa23.87■■□□□ 1.41
SSH1-207ENST00000547862 GAS2L1Q99501 681 aaPredicted RBP23.87■■□□□ 1.41
SSH1-207ENST00000547862 MPHOSPH6Q99547 160 aaKnown RBP23.87■■□□□ 1.41
SSH1-207ENST00000547862 ALDH8A1Q9H2A2 487 aaPredicted RBP23.87■■□□□ 1.41
SSH1-207ENST00000547862 PRDM12Q9H4Q4 367 aa23.87■■□□□ 1.41
SSH1-207ENST00000547862 GPHNQ9NQX3 736 aaPredicted RBP23.87■■□□□ 1.41
SSH1-207ENST00000547862 ZBBXA8MT70 800 aa23.86■■□□□ 1.41
SSH1-207ENST00000547862 DHX16O60231 1041 aaKnown RBP23.86■■□□□ 1.41
SSH1-207ENST00000547862 PURAQ00577 322 aaKnown RBP23.86■■□□□ 1.41
SSH1-207ENST00000547862 CDC37Q16543 378 aaPredicted RBP23.86■■□□□ 1.41
SSH1-207ENST00000547862 GPATCH4Q5T3I0 446 aaKnown RBP23.86■■□□□ 1.41
SSH1-207ENST00000547862 PNMA1Q8ND90 353 aa23.86■■□□□ 1.41
SSH1-207ENST00000547862 HERVK_113Q902F9 699 aa23.86■■□□□ 1.41
SSH1-207ENST00000547862 NKX2-4Q9H2Z4 354 aa23.86■■□□□ 1.41
SSH1-207ENST00000547862 KAT14Q9H8E8 782 aa23.86■■□□□ 1.41
SSH1-207ENST00000547862 TNKSO95271 1327 aa23.85■■□□□ 1.41
SSH1-207ENST00000547862 RAD50Q92878 1312 aa23.85■■□□□ 1.41
SSH1-207ENST00000547862 IQCA1Q86XH1 822 aa23.85■■□□□ 1.41
SSH1-207ENST00000547862 TICAM2Q86XR7 235 aa23.85■■□□□ 1.41
SSH1-207ENST00000547862 EXOC6Q8TAG9 804 aa23.85■■□□□ 1.41
SSH1-207ENST00000547862 MTG1Q9BT17 334 aaPredicted RBP23.85■■□□□ 1.41
SSH1-207ENST00000547862 MSRAQ9UJ68 235 aa23.85■■□□□ 1.41
SSH1-207ENST00000547862 PNMA2Q9UL42 364 aa23.85■■□□□ 1.41
SSH1-207ENST00000547862 LOC102724159A0A0B4J2E5 919 aa23.84■■□□□ 1.41
SSH1-207ENST00000547862 NUCB1Q02818 461 aa23.84■■□□□ 1.41
SSH1-207ENST00000547862 PWP2Q15269 919 aaKnown RBP23.84■■□□□ 1.41
SSH1-207ENST00000547862 RAB30Q15771 203 aa23.84■■□□□ 1.41
SSH1-207ENST00000547862 RBM47A0AV96 593 aaKnown RBP23.83■■□□□ 1.41
SSH1-207ENST00000547862 RABGGTBP53611 331 aa23.83■■□□□ 1.41
SSH1-207ENST00000547862 BRDTQ58F21 947 aaPredicted RBP23.83■■□□□ 1.41
SSH1-207ENST00000547862 DEFB128Q7Z7B8 93 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms