RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 CLMNQ96JQ2 1002 aa18.66■□□□□ 0.58
BRF1-208ENST00000546997 STXBP3O00186 592 aa18.65■□□□□ 0.58
BRF1-208ENST00000546997 ADAMTS3O15072 1205 aa18.65■□□□□ 0.58
BRF1-208ENST00000546997 CCP110O43303 1012 aa18.65■□□□□ 0.58
BRF1-208ENST00000546997 PPP1R11O60927 126 aaPredicted RBP18.65■□□□□ 0.58
BRF1-208ENST00000546997 SLC39A14Q15043 492 aa18.65■□□□□ 0.58
BRF1-208ENST00000546997 DIS3L2Q8IYB7 885 aaKnown RBP18.65■□□□□ 0.58
BRF1-208ENST00000546997 MTMR8Q96EF0 704 aa18.65■□□□□ 0.58
BRF1-208ENST00000546997 NAT10Q9H0A0 1025 aaKnown RBP18.65■□□□□ 0.58
BRF1-208ENST00000546997 EMILIN3Q9NT22 766 aa18.65■□□□□ 0.58
BRF1-208ENST00000546997 BARHL2Q9NY43 387 aa18.65■□□□□ 0.58
BRF1-208ENST00000546997 BTBD18B2RXH4 712 aa18.64■□□□□ 0.58
BRF1-208ENST00000546997 XBP1P17861 261 aa18.64■□□□□ 0.58
BRF1-208ENST00000546997 STAT2P52630 851 aa18.64■□□□□ 0.58
BRF1-208ENST00000546997 BACE1P56817 501 aa18.64■□□□□ 0.58
BRF1-208ENST00000546997 IKQ13123 557 aaPredicted RBP18.64■□□□□ 0.58
BRF1-208ENST00000546997 NR5A1Q13285 461 aa18.64■□□□□ 0.58
BRF1-208ENST00000546997 ELF2Q15723 593 aa18.64■□□□□ 0.58
BRF1-208ENST00000546997 BTNL9Q6UXG8 535 aa18.64■□□□□ 0.58
BRF1-208ENST00000546997 FILIP1Q7Z7B0 1213 aa18.64■□□□□ 0.58
BRF1-208ENST00000546997 FMR1NBQ8N0W7 255 aaPredicted RBP18.64■□□□□ 0.58
BRF1-208ENST00000546997 CCDC150Q8NCX0 1101 aa18.64■□□□□ 0.58
BRF1-208ENST00000546997 ZNF408Q9H9D4 720 aa18.64■□□□□ 0.58
BRF1-208ENST00000546997 AS3MTQ9HBK9 375 aa18.64■□□□□ 0.58
BRF1-208ENST00000546997 CSADQ9Y600 493 aa18.64■□□□□ 0.58
BRF1-208ENST00000546997 RLFQ13129 1914 aa18.64■□□□□ 0.57
BRF1-208ENST00000546997 NRDCO43847 1150 aa18.64■□□□□ 0.57
BRF1-208ENST00000546997 KINO60870 393 aaKnown RBP18.64■□□□□ 0.57
BRF1-208ENST00000546997 TPM1P09493 284 aa18.64■□□□□ 0.57
BRF1-208ENST00000546997 SNAP25P60880 206 aa18.64■□□□□ 0.57
BRF1-208ENST00000546997 MKRN4PQ13434 485 aaPredicted RBP18.64■□□□□ 0.57
BRF1-208ENST00000546997 SYDE2Q5VT97 1194 aa18.64■□□□□ 0.57
BRF1-208ENST00000546997 IPO4Q8TEX9 1081 aaKnown RBP18.64■□□□□ 0.57
BRF1-208ENST00000546997 LPAR1Q92633 364 aa18.64■□□□□ 0.57
BRF1-208ENST00000546997 SRRTQ9BXP5 876 aaKnown RBP18.64■□□□□ 0.57
BRF1-208ENST00000546997 FBXO28Q9NVF7 368 aa18.64■□□□□ 0.57
BRF1-208ENST00000546997 AFG3L2Q9Y4W6 797 aa18.64■□□□□ 0.57
BRF1-208ENST00000546997 USP27XA6NNY8 438 aa18.63■□□□□ 0.57
BRF1-208ENST00000546997 BECN2A8MW95 431 aa18.63■□□□□ 0.57
BRF1-208ENST00000546997 ZBTB5O15062 677 aa18.63■□□□□ 0.57
BRF1-208ENST00000546997 VCAM1P19320 739 aa18.63■□□□□ 0.57
BRF1-208ENST00000546997 SAFBQ15424 915 aaKnown RBP eCLIP18.63■□□□□ 0.57
BRF1-208ENST00000546997 CDC37Q16543 378 aaPredicted RBP18.63■□□□□ 0.57
BRF1-208ENST00000546997 AXDND1Q5T1B0 1012 aaPredicted RBP18.63■□□□□ 0.57
BRF1-208ENST00000546997 NOSTRINQ8IVI9 506 aa18.63■□□□□ 0.57
BRF1-208ENST00000546997 ELP3Q9H9T3 547 aa18.63■□□□□ 0.57
BRF1-208ENST00000546997 ARGLU1Q9NWB6 273 aaPredicted RBP18.63■□□□□ 0.57
BRF1-208ENST00000546997 PRR12Q9ULL5 1215 aa18.63■□□□□ 0.57
BRF1-208ENST00000546997 PNMA6FA0A0J9YX94 578 aa18.62■□□□□ 0.57
BRF1-208ENST00000546997 A0A1B0GVL5 298 aa18.62■□□□□ 0.57
BRF1-208ENST00000546997 HMGCS2P54868 508 aa18.62■□□□□ 0.57
BRF1-208ENST00000546997 PTPAQ15257 358 aa18.62■□□□□ 0.57
BRF1-208ENST00000546997 QRICH1Q2TAL8 776 aa18.62■□□□□ 0.57
BRF1-208ENST00000546997 TEX35Q5T0J7 233 aa18.62■□□□□ 0.57
BRF1-208ENST00000546997 ANKRD13AQ8IZ07 590 aa18.62■□□□□ 0.57
BRF1-208ENST00000546997 BPIFA3Q9BQP9 254 aa18.62■□□□□ 0.57
BRF1-208ENST00000546997 SH3GLB2Q9NR46 395 aa18.62■□□□□ 0.57
BRF1-208ENST00000546997 ZNF446Q9NWS9 450 aa18.62■□□□□ 0.57
BRF1-208ENST00000546997 TRPM7Q96QT4 1865 aa18.62■□□□□ 0.57
BRF1-208ENST00000546997 WDR46O15213 610 aaKnown RBP18.62■□□□□ 0.57
BRF1-208ENST00000546997 PPP6R2O75170 966 aa18.62■□□□□ 0.57
BRF1-208ENST00000546997 NDUFA8P51970 172 aa18.62■□□□□ 0.57
BRF1-208ENST00000546997 NLRP5P59047 1200 aa18.62■□□□□ 0.57
BRF1-208ENST00000546997 CEP57L1Q8IYX8 460 aa18.62■□□□□ 0.57
BRF1-208ENST00000546997 COA7Q96BR5 231 aa18.62■□□□□ 0.57
BRF1-208ENST00000546997 FOXP1Q9H334 677 aaPredicted RBP18.62■□□□□ 0.57
BRF1-208ENST00000546997 USP14P54578 494 aa18.61■□□□□ 0.57
BRF1-208ENST00000546997 NAPAP54920 295 aa18.61■□□□□ 0.57
BRF1-208ENST00000546997 TPM4P67936 248 aa18.61■□□□□ 0.57
BRF1-208ENST00000546997 FHOD1Q9Y613 1164 aa18.61■□□□□ 0.57
BRF1-208ENST00000546997 LOC285556D6RIA3 1793 aa18.61■□□□□ 0.57
BRF1-208ENST00000546997 COL11A1P12107 1806 aaPredicted RBP18.61■□□□□ 0.57
BRF1-208ENST00000546997 CMA1P23946 247 aa18.61■□□□□ 0.57
BRF1-208ENST00000546997 KRT2P35908 639 aa18.61■□□□□ 0.57
BRF1-208ENST00000546997 NOM1Q5C9Z4 860 aaKnown RBP18.61■□□□□ 0.57
BRF1-208ENST00000546997 SAMD1Q6SPF0 538 aaPredicted RBP18.61■□□□□ 0.57
BRF1-208ENST00000546997 ARMC9Q7Z3E5 817 aa18.61■□□□□ 0.57
BRF1-208ENST00000546997 DHX40Q8IX18 779 aaKnown RBP18.61■□□□□ 0.57
BRF1-208ENST00000546997 KIFC2Q96AC6 838 aa18.61■□□□□ 0.57
BRF1-208ENST00000546997 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.61■□□□□ 0.57
BRF1-208ENST00000546997 FAM205CA6NFA0 338 aa18.6■□□□□ 0.57
BRF1-208ENST00000546997 TAL1P17542 331 aaPredicted RBP18.6■□□□□ 0.57
BRF1-208ENST00000546997 MARCKSP29966 332 aaPredicted RBP18.6■□□□□ 0.57
BRF1-208ENST00000546997 MUM1L1Q5H9M0 696 aa18.6■□□□□ 0.57
BRF1-208ENST00000546997 EARS2Q5JPH6 523 aaKnown RBP18.6■□□□□ 0.57
BRF1-208ENST00000546997 CCDC148Q8NFR7 591 aa18.6■□□□□ 0.57
BRF1-208ENST00000546997 TNFRSF25Q93038 417 aa18.6■□□□□ 0.57
BRF1-208ENST00000546997 OTUD5Q96G74 571 aa18.6■□□□□ 0.57
BRF1-208ENST00000546997 TANGO6Q9C0B7 1094 aa18.6■□□□□ 0.57
BRF1-208ENST00000546997 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.6■□□□□ 0.57
BRF1-208ENST00000546997 FEM1BQ9UK73 627 aa18.6■□□□□ 0.57
BRF1-208ENST00000546997 PHLPP2Q6ZVD8 1323 aa18.59■□□□□ 0.57
BRF1-208ENST00000546997 IRF6O14896 467 aa18.59■□□□□ 0.57
BRF1-208ENST00000546997 ZRANB2O95218 330 aaKnown RBP eCLIP18.59■□□□□ 0.57
BRF1-208ENST00000546997 LDLRAD1Q5T700 205 aa18.59■□□□□ 0.57
BRF1-208ENST00000546997 C11orf57Q6ZUT1 292 aaPredicted RBP18.59■□□□□ 0.57
BRF1-208ENST00000546997 TXLNBQ8N3L3 684 aa18.59■□□□□ 0.57
BRF1-208ENST00000546997 JMYQ8N9B5 988 aa18.59■□□□□ 0.57
BRF1-208ENST00000546997 ZMYND12Q9H0C1 365 aa18.59■□□□□ 0.57
BRF1-208ENST00000546997 RPAP3Q9H6T3 665 aaPredicted RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms