RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 RLBP1P12271 317 aa11.03□□□□□ -0.64
SSH1-205ENST00000546812 RRP1P56182 461 aaKnown RBP11.03□□□□□ -0.64
SSH1-205ENST00000546812 WDR5P61964 334 aaKnown RBP11.03□□□□□ -0.64
SSH1-205ENST00000546812 UBE3CQ15386 1083 aa11.03□□□□□ -0.64
SSH1-205ENST00000546812 LRRFIP1Q32MZ4 808 aaKnown RBP11.03□□□□□ -0.64
SSH1-205ENST00000546812 FAM47CQ5HY64 1035 aa11.03□□□□□ -0.64
SSH1-205ENST00000546812 TMCO2Q7Z6W1 182 aaPredicted RBP11.03□□□□□ -0.64
SSH1-205ENST00000546812 GMCL1P1Q8NEA9 526 aa11.03□□□□□ -0.64
SSH1-205ENST00000546812 PANK1Q8TE04 598 aa11.03□□□□□ -0.64
SSH1-205ENST00000546812 TRERF1Q96PN7 1200 aa11.03□□□□□ -0.64
SSH1-205ENST00000546812 TGS1Q96RS0 853 aaKnown RBP11.03□□□□□ -0.64
SSH1-205ENST00000546812 RAD9AQ99638 391 aa11.03□□□□□ -0.64
SSH1-205ENST00000546812 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.03□□□□□ -0.64
SSH1-205ENST00000546812 PAG1Q9NWQ8 432 aa11.03□□□□□ -0.64
SSH1-205ENST00000546812 CYP39A1Q9NYL5 469 aa11.03□□□□□ -0.64
SSH1-205ENST00000546812 ARPP21Q9UBL0 812 aaPredicted RBP11.03□□□□□ -0.64
SSH1-205ENST00000546812 MTUS1Q9ULD2 1270 aa11.03□□□□□ -0.64
SSH1-205ENST00000546812 TMEM232C9JQI7 657 aa11.02□□□□□ -0.65
SSH1-205ENST00000546812 GJB5O95377 273 aa11.02□□□□□ -0.65
SSH1-205ENST00000546812 BMP3P12645 472 aa11.02□□□□□ -0.65
SSH1-205ENST00000546812 PTPN11Q06124 597 aaPredicted RBP11.02□□□□□ -0.65
SSH1-205ENST00000546812 GPNMBQ14956 572 aa11.02□□□□□ -0.65
SSH1-205ENST00000546812 SBK1Q52WX2 424 aa11.02□□□□□ -0.65
SSH1-205ENST00000546812 HSP90AB4PQ58FF6 505 aa11.02□□□□□ -0.65
SSH1-205ENST00000546812 SLFN13Q68D06 897 aa11.02□□□□□ -0.65
SSH1-205ENST00000546812 CEP85Q6P2H3 762 aa11.02□□□□□ -0.65
SSH1-205ENST00000546812 CLASRPQ8N2M8 674 aaKnown RBP11.02□□□□□ -0.65
SSH1-205ENST00000546812 RHPN1Q8TCX5 695 aa11.02□□□□□ -0.65
SSH1-205ENST00000546812 NEK9Q8TD19 979 aa11.02□□□□□ -0.65
SSH1-205ENST00000546812 WDR11Q9BZH6 1224 aa11.02□□□□□ -0.65
SSH1-205ENST00000546812 MTMR4Q9NYA4 1195 aa11.02□□□□□ -0.65
SSH1-205ENST00000546812 MCM3APO60318 1980 aa11.02□□□□□ -0.65
SSH1-205ENST00000546812 RBM47A0AV96 593 aaKnown RBP11.01□□□□□ -0.65
SSH1-205ENST00000546812 LINC01553A4QN01 128 aa11.01□□□□□ -0.65
SSH1-205ENST00000546812 KPNA6O60684 536 aa11.01□□□□□ -0.65
SSH1-205ENST00000546812 TTLL1O95922 423 aa11.01□□□□□ -0.65
SSH1-205ENST00000546812 CHGBP05060 677 aa11.01□□□□□ -0.65
SSH1-205ENST00000546812 IFIT2P09913 472 aaKnown RBP11.01□□□□□ -0.65
SSH1-205ENST00000546812 ALAS1P13196 640 aa11.01□□□□□ -0.65
SSH1-205ENST00000546812 STAT2P52630 851 aa11.01□□□□□ -0.65
SSH1-205ENST00000546812 DEFB103AP81534 67 aa11.01□□□□□ -0.65
SSH1-205ENST00000546812 BRDTQ58F21 947 aaPredicted RBP11.01□□□□□ -0.65
SSH1-205ENST00000546812 C20orf194Q5TEA3 1177 aa11.01□□□□□ -0.65
SSH1-205ENST00000546812 HFE2Q6ZVN8 426 aa11.01□□□□□ -0.65
SSH1-205ENST00000546812 FAM160B2Q86V87 743 aa11.01□□□□□ -0.65
SSH1-205ENST00000546812 ITPRIPQ8IWB1 547 aa11.01□□□□□ -0.65
SSH1-205ENST00000546812 AFAP1L1Q8TED9 768 aa11.01□□□□□ -0.65
SSH1-205ENST00000546812 CHURC1Q8WUH1 139 aa11.01□□□□□ -0.65
SSH1-205ENST00000546812 STAG1Q8WVM7 1258 aa11.01□□□□□ -0.65
SSH1-205ENST00000546812 CEP95Q96GE4 821 aa11.01□□□□□ -0.65
SSH1-205ENST00000546812 MFSD14AQ96MC6 490 aa11.01□□□□□ -0.65
SSH1-205ENST00000546812 PUS7LQ9H0K6 701 aaKnown RBP11.01□□□□□ -0.65
SSH1-205ENST00000546812 PRKAG3Q9UGI9 489 aa11.01□□□□□ -0.65
SSH1-205ENST00000546812 NOD1Q9Y239 953 aa11.01□□□□□ -0.65
SSH1-205ENST00000546812 ABHD14A-ACY1A0A1B0GW23 586 aa11□□□□□ -0.65
SSH1-205ENST00000546812 C19orf67A6NJJ6 358 aa11□□□□□ -0.65
SSH1-205ENST00000546812 A6NJR5 290 aa11□□□□□ -0.65
SSH1-205ENST00000546812 H3BQ06 376 aaPredicted RBP11□□□□□ -0.65
SSH1-205ENST00000546812 ST18O60284 1047 aa11□□□□□ -0.65
SSH1-205ENST00000546812 ZP2Q05996 745 aa11□□□□□ -0.65
SSH1-205ENST00000546812 MUM1L1Q5H9M0 696 aa11□□□□□ -0.65
SSH1-205ENST00000546812 GIMAP6Q6P9H5 292 aa11□□□□□ -0.65
SSH1-205ENST00000546812 ZNF444Q8N0Y2 327 aaPredicted RBP11□□□□□ -0.65
SSH1-205ENST00000546812 STK11IPQ8N1F8 1099 aa11□□□□□ -0.65
SSH1-205ENST00000546812 LRRC47Q8N1G4 583 aaKnown RBP11□□□□□ -0.65
SSH1-205ENST00000546812 CCDC155Q8N6L0 562 aa11□□□□□ -0.65
SSH1-205ENST00000546812 OR6J1Q8NGC5 347 aa11□□□□□ -0.65
SSH1-205ENST00000546812 CAGE1Q8TC20 777 aa11□□□□□ -0.65
SSH1-205ENST00000546812 PPP1R13LQ8WUF5 828 aa11□□□□□ -0.65
SSH1-205ENST00000546812 ANKS1AQ92625 1134 aa11□□□□□ -0.65
SSH1-205ENST00000546812 GMCL1Q96IK5 515 aa11□□□□□ -0.65
SSH1-205ENST00000546812 PURBQ96QR8 312 aaKnown RBP11□□□□□ -0.65
SSH1-205ENST00000546812 BOLA2Q9H3K6 86 aa11□□□□□ -0.65
SSH1-205ENST00000546812 ZNF287Q9HBT7 754 aa11□□□□□ -0.65
SSH1-205ENST00000546812 CTNNA3Q9UI47 895 aa11□□□□□ -0.65
SSH1-205ENST00000546812 FAM50BQ9Y247 325 aa11□□□□□ -0.65
SSH1-205ENST00000546812 LOC102724159A0A0B4J2E5 919 aa10.99□□□□□ -0.65
SSH1-205ENST00000546812 GSG1L2A8MUP6 293 aa10.99□□□□□ -0.65
SSH1-205ENST00000546812 MINDY4BA8MYZ0 360 aa10.99□□□□□ -0.65
SSH1-205ENST00000546812 PLA2G6O60733 806 aa10.99□□□□□ -0.65
SSH1-205ENST00000546812 PARNO95453 639 aaKnown RBP10.99□□□□□ -0.65
SSH1-205ENST00000546812 CXCL10P02778 98 aa10.99□□□□□ -0.65
SSH1-205ENST00000546812 MS4A1P11836 297 aa10.99□□□□□ -0.65
SSH1-205ENST00000546812 SELPP16109 830 aa10.99□□□□□ -0.65
SSH1-205ENST00000546812 ATP5JP18859 108 aa10.99□□□□□ -0.65
SSH1-205ENST00000546812 IKQ13123 557 aaPredicted RBP10.99□□□□□ -0.65
SSH1-205ENST00000546812 PWP2Q15269 919 aaKnown RBP10.99□□□□□ -0.65
SSH1-205ENST00000546812 PTGISQ16647 500 aa10.99□□□□□ -0.65
SSH1-205ENST00000546812 CNKSR3Q6P9H4 555 aa10.99□□□□□ -0.65
SSH1-205ENST00000546812 NSMFQ6X4W1 530 aa10.99□□□□□ -0.65
SSH1-205ENST00000546812 ADHFE1Q8IWW8 467 aa10.99□□□□□ -0.65
SSH1-205ENST00000546812 MRPL38Q96DV4 380 aaKnown RBP10.99□□□□□ -0.65
SSH1-205ENST00000546812 KIF1BPQ96EK5 621 aa10.99□□□□□ -0.65
SSH1-205ENST00000546812 STRBPQ96SI9 672 aaKnown RBP10.99□□□□□ -0.65
SSH1-205ENST00000546812 CRBNQ96SW2 442 aa10.99□□□□□ -0.65
SSH1-205ENST00000546812 PHOX2BQ99453 314 aa10.99□□□□□ -0.65
SSH1-205ENST00000546812 HAUS7Q99871 368 aa10.99□□□□□ -0.65
SSH1-205ENST00000546812 UPF3BQ9BZI7 483 aaKnown RBP10.99□□□□□ -0.65
SSH1-205ENST00000546812 ADD3Q9UEY8 706 aaKnown RBP10.99□□□□□ -0.65
SSH1-205ENST00000546812 ISY1Q9ULR0 285 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms