RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 CAPS2Q9BXY5 557 aa16.32■□□□□ 0.2
HOXC11-202ENST00000546378 GOPCQ9HD26 462 aa16.32■□□□□ 0.2
HOXC11-202ENST00000546378 ZNF219Q9P2Y4 722 aaPredicted RBP16.32■□□□□ 0.2
HOXC11-202ENST00000546378 TLDC2A0PJX2 215 aa16.31■□□□□ 0.2
HOXC11-202ENST00000546378 EPHB6O15197 1021 aa16.31■□□□□ 0.2
HOXC11-202ENST00000546378 CYLC1P35663 651 aaPredicted RBP16.31■□□□□ 0.2
HOXC11-202ENST00000546378 EIF4A3P38919 411 aaKnown RBP16.31■□□□□ 0.2
HOXC11-202ENST00000546378 SARSP49591 514 aaKnown RBP16.31■□□□□ 0.2
HOXC11-202ENST00000546378 PKN1Q16512 942 aa16.31■□□□□ 0.2
HOXC11-202ENST00000546378 WHAMMP3Q1A5X7 153 aa16.31■□□□□ 0.2
HOXC11-202ENST00000546378 MB21D1Q8N884 522 aa16.31■□□□□ 0.2
HOXC11-202ENST00000546378 GLIS3Q8NEA6 775 aa16.31■□□□□ 0.2
HOXC11-202ENST00000546378 SCLT1Q96NL6 688 aa16.31■□□□□ 0.2
HOXC11-202ENST00000546378 FAM169AQ9Y6X4 670 aa16.31■□□□□ 0.2
HOXC11-202ENST00000546378 FAM205AQ6ZU69 1335 aa16.31■□□□□ 0.2
HOXC11-202ENST00000546378 ABCC12Q96J65 1359 aa16.31■□□□□ 0.2
HOXC11-202ENST00000546378 NRAPQ86VF7 1730 aa16.31■□□□□ 0.2
HOXC11-202ENST00000546378 MYH14Q7Z406 1995 aaKnown RBP16.31■□□□□ 0.2
HOXC11-202ENST00000546378 SYF2O95926 243 aaKnown RBP16.31■□□□□ 0.2
HOXC11-202ENST00000546378 EPS15P42566 896 aa16.31■□□□□ 0.2
HOXC11-202ENST00000546378 LIFRP42702 1097 aa16.31■□□□□ 0.2
HOXC11-202ENST00000546378 DIXDC1Q155Q3 683 aa16.31■□□□□ 0.2
HOXC11-202ENST00000546378 RC3H1Q5TC82 1133 aaKnown RBP16.31■□□□□ 0.2
HOXC11-202ENST00000546378 TCERG1LQ5VWI1 586 aa16.31■□□□□ 0.2
HOXC11-202ENST00000546378 C8orf74Q6P047 294 aa16.31■□□□□ 0.2
HOXC11-202ENST00000546378 EP400NLQ6ZTU2 488 aa16.31■□□□□ 0.2
HOXC11-202ENST00000546378 APTXQ7Z2E3 356 aaKnown RBP16.31■□□□□ 0.2
HOXC11-202ENST00000546378 DDX42Q86XP3 938 aaKnown RBP eCLIP16.31■□□□□ 0.2
HOXC11-202ENST00000546378 NYXQ9GZU5 481 aa16.31■□□□□ 0.2
HOXC11-202ENST00000546378 EPB41L5Q9HCM4 733 aa16.31■□□□□ 0.2
HOXC11-202ENST00000546378 POTEB2H3BUK9 544 aa16.3■□□□□ 0.2
HOXC11-202ENST00000546378 ONECUT3O60422 494 aaPredicted RBP16.3■□□□□ 0.2
HOXC11-202ENST00000546378 USP14P54578 494 aa16.3■□□□□ 0.2
HOXC11-202ENST00000546378 TAX1BP1Q86VP1 789 aa16.3■□□□□ 0.2
HOXC11-202ENST00000546378 GSDMAQ96QA5 445 aa16.3■□□□□ 0.2
HOXC11-202ENST00000546378 KRT12Q99456 494 aa16.3■□□□□ 0.2
HOXC11-202ENST00000546378 UBR2Q8IWV8 1755 aa16.3■□□□□ 0.2
HOXC11-202ENST00000546378 INPP5BP32019 993 aa16.3■□□□□ 0.2
HOXC11-202ENST00000546378 E2F5Q15329 346 aa16.3■□□□□ 0.2
HOXC11-202ENST00000546378 TUBGCP6Q96RT7 1819 aa16.3■□□□□ 0.2
HOXC11-202ENST00000546378 MROH5Q6ZUA9 1318 aa16.3■□□□□ 0.2
HOXC11-202ENST00000546378 PAFAH1B1P43034 410 aa16.3■□□□□ 0.2
HOXC11-202ENST00000546378 MAGEA1P43355 309 aa16.3■□□□□ 0.2
HOXC11-202ENST00000546378 NAPAP54920 295 aa16.3■□□□□ 0.2
HOXC11-202ENST00000546378 IFT88Q13099 833 aa16.3■□□□□ 0.2
HOXC11-202ENST00000546378 RAPGEF1Q13905 1077 aa16.3■□□□□ 0.2
HOXC11-202ENST00000546378 SGMS1Q86VZ5 419 aa16.3■□□□□ 0.2
HOXC11-202ENST00000546378 AP1M1Q9BXS5 423 aa16.3■□□□□ 0.2
HOXC11-202ENST00000546378 BUB1BO60566 1050 aaPredicted RBP16.29■□□□□ 0.2
HOXC11-202ENST00000546378 PLCG1P19174 1290 aa16.29■□□□□ 0.2
HOXC11-202ENST00000546378 KCNJ6P48051 423 aa16.29■□□□□ 0.2
HOXC11-202ENST00000546378 CCDC40Q4G0X9 1142 aa16.29■□□□□ 0.2
HOXC11-202ENST00000546378 ANKRD40Q6AI12 368 aa16.29■□□□□ 0.2
HOXC11-202ENST00000546378 MAPKAPK5Q8IW41 473 aa16.29■□□□□ 0.2
HOXC11-202ENST00000546378 OTUD6BQ8N6M0 293 aa16.29■□□□□ 0.2
HOXC11-202ENST00000546378 FRMPD2Q68DX3 1309 aaPredicted RBP16.29■□□□□ 0.2
HOXC11-202ENST00000546378 LAMB4A4D0S4 1761 aa16.29■□□□□ 0.2
HOXC11-202ENST00000546378 HSF2BPO75031 334 aa16.29■□□□□ 0.2
HOXC11-202ENST00000546378 SLURP2P0DP57 97 aa16.29■□□□□ 0.2
HOXC11-202ENST00000546378 ICE2Q659A1 982 aa16.29■□□□□ 0.2
HOXC11-202ENST00000546378 PROM2Q8N271 834 aa16.29■□□□□ 0.2
HOXC11-202ENST00000546378 TSEN2Q8NCE0 465 aaKnown RBP16.29■□□□□ 0.2
HOXC11-202ENST00000546378 RPGRQ92834 1020 aaKnown RBP16.29■□□□□ 0.2
HOXC11-202ENST00000546378 GGT7Q9UJ14 662 aa16.29■□□□□ 0.2
HOXC11-202ENST00000546378 E7EVH7 732 aa16.29■□□□□ 0.2
HOXC11-202ENST00000546378 SCG2P13521 617 aa16.29■□□□□ 0.2
HOXC11-202ENST00000546378 DZIP1Q86YF9 867 aaKnown RBP16.29■□□□□ 0.2
HOXC11-202ENST00000546378 FBXO3Q9UK99 471 aa16.29■□□□□ 0.2
HOXC11-202ENST00000546378 KRT18P05783 430 aaKnown RBP16.28■□□□□ 0.2
HOXC11-202ENST00000546378 MINPP1Q9UNW1 487 aa16.28■□□□□ 0.2
HOXC11-202ENST00000546378 TCRBV5S4A2TA0A5A2 114 aa16.28■□□□□ 0.2
HOXC11-202ENST00000546378 TACC1O75410 805 aa16.28■□□□□ 0.2
HOXC11-202ENST00000546378 SERPINB2P05120 415 aa16.28■□□□□ 0.2
HOXC11-202ENST00000546378 FAM153BP0C7A2 387 aa16.28■□□□□ 0.2
HOXC11-202ENST00000546378 TNNI2P48788 182 aa16.28■□□□□ 0.2
HOXC11-202ENST00000546378 CARSP49589 748 aaKnown RBP16.28■□□□□ 0.2
HOXC11-202ENST00000546378 ADCY1Q08828 1119 aa16.28■□□□□ 0.2
HOXC11-202ENST00000546378 FAM153CQ494X1 144 aa16.28■□□□□ 0.2
HOXC11-202ENST00000546378 TBC1D10BQ4KMP7 808 aaPredicted RBP16.28■□□□□ 0.2
HOXC11-202ENST00000546378 USP17L2Q6R6M4 530 aa16.28■□□□□ 0.2
HOXC11-202ENST00000546378 TCP11L1Q9NUJ3 509 aa16.28■□□□□ 0.2
HOXC11-202ENST00000546378 TMEM260Q9NX78 707 aa16.28■□□□□ 0.2
HOXC11-202ENST00000546378 FAM153AQ9UHL3 310 aa16.28■□□□□ 0.2
HOXC11-202ENST00000546378 MYH8P13535 1937 aa16.27■□□□□ 0.2
HOXC11-202ENST00000546378 POTEMA6NI47 508 aa16.27■□□□□ 0.2
HOXC11-202ENST00000546378 USO1O60763 962 aaKnown RBP16.27■□□□□ 0.2
HOXC11-202ENST00000546378 CEP85LQ5SZL2 805 aa16.27■□□□□ 0.2
HOXC11-202ENST00000546378 WDR59Q6PJI9 974 aa16.27■□□□□ 0.2
HOXC11-202ENST00000546378 VGLL2Q8N8G2 317 aa16.27■□□□□ 0.2
HOXC11-202ENST00000546378 NAA15Q9BXJ9 866 aaKnown RBP16.27■□□□□ 0.2
HOXC11-202ENST00000546378 RBM12Q9NTZ6 932 aaKnown RBP16.27■□□□□ 0.2
HOXC11-202ENST00000546378 ARID4AP29374 1257 aaPredicted RBP16.27■□□□□ 0.2
HOXC11-202ENST00000546378 IRAK1P51617 712 aa16.27■□□□□ 0.2
HOXC11-202ENST00000546378 KRT83P78385 493 aa16.27■□□□□ 0.2
HOXC11-202ENST00000546378 PICALMQ13492 652 aa16.27■□□□□ 0.2
HOXC11-202ENST00000546378 CAVIN4Q5BKX8 364 aa16.27■□□□□ 0.2
HOXC11-202ENST00000546378 MUM1L1Q5H9M0 696 aa16.27■□□□□ 0.2
HOXC11-202ENST00000546378 CDKAL1Q5VV42 579 aa16.27■□□□□ 0.2
HOXC11-202ENST00000546378 TRIML1Q8N9V2 468 aa16.27■□□□□ 0.2
HOXC11-202ENST00000546378 PPM1EQ8WY54 764 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms