RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, human

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBC-213	ENST00000546120	VCX	Q9H320	206 aa		11.23	□□□□□ -0.61
UBC-213	ENST00000546120	RNF41	Q9H4P4	317 aa	Predicted RBP	11.23	□□□□□ -0.61
UBC-213	ENST00000546120	SLITRK6	Q9H5Y7	841 aa		11.23	□□□□□ -0.61
UBC-213	ENST00000546120	FAM114A2	Q9NRY5	505 aa		11.23	□□□□□ -0.61
UBC-213	ENST00000546120	DMGDH	Q9UI17	866 aa	Known RBP	11.23	□□□□□ -0.61
UBC-213	ENST00000546120	PCDHA13	Q9Y5I0	950 aa		11.23	□□□□□ -0.61
UBC-213	ENST00000546120	NRXN3	Q9Y4C0	1643 aa		11.23	□□□□□ -0.61
UBC-213	ENST00000546120	POTEF	A5A3E0	1075 aa		11.22	□□□□□ -0.61
UBC-213	ENST00000546120		H7C1W4	665 aa		11.22	□□□□□ -0.61
UBC-213	ENST00000546120	PDE2A	O00408	941 aa	Predicted RBP	11.22	□□□□□ -0.61
UBC-213	ENST00000546120	PIK3C2A	O00443	1686 aa		11.22	□□□□□ -0.61
UBC-213	ENST00000546120	LAD1	O00515	517 aa		11.22	□□□□□ -0.61
UBC-213	ENST00000546120	PRPF3	O43395	683 aa	Known RBP	11.22	□□□□□ -0.61
UBC-213	ENST00000546120	DTNB	O60941	627 aa		11.22	□□□□□ -0.61
UBC-213	ENST00000546120	ANP32D	O95626	131 aa		11.22	□□□□□ -0.61
UBC-213	ENST00000546120	LMNA	P02545	664 aa	Known RBP	11.22	□□□□□ -0.61
UBC-213	ENST00000546120	POTEI	P0CG38	1075 aa		11.22	□□□□□ -0.61
UBC-213	ENST00000546120	POTEJ	P0CG39	1038 aa		11.22	□□□□□ -0.61
UBC-213	ENST00000546120	MYB	P10242	640 aa		11.22	□□□□□ -0.61
UBC-213	ENST00000546120	GNAT2	P19087	354 aa		11.22	□□□□□ -0.61
UBC-213	ENST00000546120	TOB1	P50616	345 aa	Predicted RBP	11.22	□□□□□ -0.61
UBC-213	ENST00000546120	C2orf54	Q08AI8	447 aa		11.22	□□□□□ -0.61
UBC-213	ENST00000546120	MKRN3	Q13064	507 aa	Known RBP	11.22	□□□□□ -0.61
UBC-213	ENST00000546120	POTEE	Q6S8J3	1075 aa		11.22	□□□□□ -0.61
UBC-213	ENST00000546120	PPP4R3CP	Q6ZMV5	832 aa		11.22	□□□□□ -0.61
UBC-213	ENST00000546120	EP400NL	Q6ZTU2	488 aa		11.22	□□□□□ -0.61
UBC-213	ENST00000546120	RPUSD2	Q8IZ73	545 aa	Known RBP	11.22	□□□□□ -0.61
UBC-213	ENST00000546120	NGDN	Q8NEJ9	315 aa	Known RBP	11.22	□□□□□ -0.61
UBC-213	ENST00000546120	MICAL1	Q8TDZ2	1067 aa		11.22	□□□□□ -0.61
UBC-213	ENST00000546120	PGM2	Q96G03	612 aa		11.22	□□□□□ -0.61
UBC-213	ENST00000546120	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.22	□□□□□ -0.61
UBC-213	ENST00000546120	CHP1	Q99653	195 aa		11.22	□□□□□ -0.61
UBC-213	ENST00000546120	TRIM7	Q9C029	511 aa		11.22	□□□□□ -0.61
UBC-213	ENST00000546120	VPS16	Q9H269	839 aa		11.22	□□□□□ -0.61
UBC-213	ENST00000546120	RGL1	Q9NZL6	768 aa		11.22	□□□□□ -0.61
UBC-213	ENST00000546120	HDAC6	Q9UBN7	1215 aa		11.22	□□□□□ -0.61
UBC-213	ENST00000546120	CTNND2	Q9UQB3	1225 aa		11.22	□□□□□ -0.61
UBC-213	ENST00000546120	LEMD3	Q9Y2U8	911 aa		11.22	□□□□□ -0.61
UBC-213	ENST00000546120	RTL9	Q8NET4	1388 aa		11.21	□□□□□ -0.61
UBC-213	ENST00000546120	LRRD1	A4D1F6	860 aa		11.21	□□□□□ -0.61
UBC-213	ENST00000546120	CCDC169	A6NNP5	214 aa		11.21	□□□□□ -0.61
UBC-213	ENST00000546120	EYA2	O00167	538 aa		11.21	□□□□□ -0.61
UBC-213	ENST00000546120	DNM1L	O00429	736 aa		11.21	□□□□□ -0.61
UBC-213	ENST00000546120	HEXIM1	O94992	359 aa	Known RBP	11.21	□□□□□ -0.61
UBC-213	ENST00000546120	RPN1	P04843	607 aa	Known RBP	11.21	□□□□□ -0.61
UBC-213	ENST00000546120	CD44	P16070	742 aa	Known RBP	11.21	□□□□□ -0.61
UBC-213	ENST00000546120	KRT2	P35908	639 aa		11.21	□□□□□ -0.61
UBC-213	ENST00000546120	CCT6A	P40227	531 aa	Known RBP	11.21	□□□□□ -0.61
UBC-213	ENST00000546120	ATP1A2	P50993	1020 aa		11.21	□□□□□ -0.61
UBC-213	ENST00000546120	PAPOLA	P51003	745 aa	Known RBP	11.21	□□□□□ -0.61
UBC-213	ENST00000546120	PDE6C	P51160	858 aa		11.21	□□□□□ -0.61
UBC-213	ENST00000546120	CCNH	P51946	323 aa	Predicted RBP	11.21	□□□□□ -0.61
UBC-213	ENST00000546120	NLRP6	P59044	892 aa		11.21	□□□□□ -0.61
UBC-213	ENST00000546120	AMPD3	Q01432	767 aa		11.21	□□□□□ -0.61
UBC-213	ENST00000546120	PPP1R7	Q15435	360 aa		11.21	□□□□□ -0.61
UBC-213	ENST00000546120	SPDYA	Q5MJ70	313 aa		11.21	□□□□□ -0.61
UBC-213	ENST00000546120	ERMARD	Q5T6L9	678 aa		11.21	□□□□□ -0.61
UBC-213	ENST00000546120	KLHL10	Q6JEL2	608 aa		11.21	□□□□□ -0.61
UBC-213	ENST00000546120	HIBCH	Q6NVY1	386 aa	Predicted RBP	11.21	□□□□□ -0.61
UBC-213	ENST00000546120	PIGW	Q7Z7B1	504 aa		11.21	□□□□□ -0.61
UBC-213	ENST00000546120	FAM228A	Q86W67	206 aa		11.21	□□□□□ -0.61
UBC-213	ENST00000546120	HOMEZ	Q8IX15	550 aa		11.21	□□□□□ -0.61
UBC-213	ENST00000546120	GALNT15	Q8N3T1	639 aa		11.21	□□□□□ -0.61
UBC-213	ENST00000546120	NBPF15	Q8N660	670 aa		11.21	□□□□□ -0.61
UBC-213	ENST00000546120	TSEN2	Q8NCE0	465 aa	Known RBP	11.21	□□□□□ -0.61
UBC-213	ENST00000546120	IGDCC4	Q8TDY8	1250 aa		11.21	□□□□□ -0.61
UBC-213	ENST00000546120	TAF4B	Q92750	862 aa		11.21	□□□□□ -0.61
UBC-213	ENST00000546120	GRAMD1A	Q96CP6	724 aa		11.21	□□□□□ -0.61
UBC-213	ENST00000546120	TMEM109	Q9BVC6	243 aa		11.21	□□□□□ -0.61
UBC-213	ENST00000546120	HAUS2	Q9NVX0	235 aa		11.21	□□□□□ -0.61
UBC-213	ENST00000546120	CEP126	Q9P2H0	1117 aa		11.21	□□□□□ -0.61
UBC-213	ENST00000546120	CNOT7	Q9UIV1	285 aa	Known RBP	11.21	□□□□□ -0.61
UBC-213	ENST00000546120	PLAA	Q9Y263	795 aa		11.21	□□□□□ -0.61
UBC-213	ENST00000546120	LAMA4	Q16363	1823 aa		11.21	□□□□□ -0.62
UBC-213	ENST00000546120	DDX60	Q8IY21	1712 aa	Known RBP	11.21	□□□□□ -0.62
UBC-213	ENST00000546120	BHMG1	C9JSJ3	638 aa	Predicted RBP	11.2	□□□□□ -0.62
UBC-213	ENST00000546120	FOXN1	O15353	648 aa		11.2	□□□□□ -0.62
UBC-213	ENST00000546120	HNRNPCL1	O60812	293 aa	Known RBP	11.2	□□□□□ -0.62
UBC-213	ENST00000546120	SRGAP2	O75044	1071 aa		11.2	□□□□□ -0.62
UBC-213	ENST00000546120	RHOBTB3	O94955	611 aa		11.2	□□□□□ -0.62
UBC-213	ENST00000546120	BAG3	O95817	575 aa		11.2	□□□□□ -0.62
UBC-213	ENST00000546120	KRT14	P02533	472 aa		11.2	□□□□□ -0.62
UBC-213	ENST00000546120	LTK	P29376	864 aa		11.2	□□□□□ -0.62
UBC-213	ENST00000546120	MAGEA1	P43355	309 aa		11.2	□□□□□ -0.62
UBC-213	ENST00000546120	NLRP5	P59047	1200 aa		11.2	□□□□□ -0.62
UBC-213	ENST00000546120	ATP2C1	P98194	919 aa	Predicted RBP	11.2	□□□□□ -0.62
UBC-213	ENST00000546120	CCDC15	Q0P6D6	951 aa		11.2	□□□□□ -0.62
UBC-213	ENST00000546120	RTN1	Q16799	776 aa		11.2	□□□□□ -0.62
UBC-213	ENST00000546120	VWA3B	Q502W6	1294 aa		11.2	□□□□□ -0.62
UBC-213	ENST00000546120	TMEM67	Q5HYA8	995 aa		11.2	□□□□□ -0.62
UBC-213	ENST00000546120	CWF19L1	Q69YN2	538 aa	Known RBP	11.2	□□□□□ -0.62
UBC-213	ENST00000546120	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.2	□□□□□ -0.62
UBC-213	ENST00000546120	MTHFD1L	Q6UB35	978 aa		11.2	□□□□□ -0.62
UBC-213	ENST00000546120	BTNL9	Q6UXG8	535 aa		11.2	□□□□□ -0.62
UBC-213	ENST00000546120	TAOK1	Q7L7X3	1001 aa		11.2	□□□□□ -0.62
UBC-213	ENST00000546120	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	11.2	□□□□□ -0.62
UBC-213	ENST00000546120	ACTRT1	Q8TDG2	376 aa		11.2	□□□□□ -0.62
UBC-213	ENST00000546120	PIK3R5	Q8WYR1	880 aa		11.2	□□□□□ -0.62
UBC-213	ENST00000546120	OSBP2	Q969R2	916 aa		11.2	□□□□□ -0.62
UBC-213	ENST00000546120	PPP1R14B	Q96C90	147 aa		11.2	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms