RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 ABHD16BQ9H3Z7 469 aa19.13■□□□□ 0.65
DDX55-212ENST00000544738 RAVER2Q9HCJ3 691 aaKnown RBP19.13■□□□□ 0.65
DDX55-212ENST00000544738 C11orf16Q9NQ32 467 aa19.13■□□□□ 0.65
DDX55-212ENST00000544738 ISY1Q9ULR0 285 aaKnown RBP19.13■□□□□ 0.65
DDX55-212ENST00000544738 RIPK3Q9Y572 518 aa19.13■□□□□ 0.65
DDX55-212ENST00000544738 CCDC171Q6TFL3 1326 aa19.12■□□□□ 0.65
DDX55-212ENST00000544738 PLA2G6O60733 806 aa19.12■□□□□ 0.65
DDX55-212ENST00000544738 MCCP23508 829 aa19.12■□□□□ 0.65
DDX55-212ENST00000544738 IKQ13123 557 aaPredicted RBP19.12■□□□□ 0.65
DDX55-212ENST00000544738 TMEM67Q5HYA8 995 aa19.12■□□□□ 0.65
DDX55-212ENST00000544738 RCSD1Q6JBY9 416 aa19.12■□□□□ 0.65
DDX55-212ENST00000544738 HLA-CQ95604 372 aa19.12■□□□□ 0.65
DDX55-212ENST00000544738 INCENPQ9NQS7 918 aa19.12■□□□□ 0.65
DDX55-212ENST00000544738 IL17RBQ9NRM6 502 aa19.12■□□□□ 0.65
DDX55-212ENST00000544738 TOMM22Q9NS69 142 aa19.12■□□□□ 0.65
DDX55-212ENST00000544738 DNAJC25-GNG10A0A024R161 153 aa19.11■□□□□ 0.65
DDX55-212ENST00000544738 CA3P07451 260 aa19.11■□□□□ 0.65
DDX55-212ENST00000544738 PCP11498 1178 aaKnown RBP19.11■□□□□ 0.65
DDX55-212ENST00000544738 SDSP20132 328 aa19.11■□□□□ 0.65
DDX55-212ENST00000544738 ITGA7Q13683 1181 aa19.11■□□□□ 0.65
DDX55-212ENST00000544738 ZNF467Q7Z7K2 595 aaPredicted RBP19.11■□□□□ 0.65
DDX55-212ENST00000544738 ANKRD35Q8N283 1001 aa19.11■□□□□ 0.65
DDX55-212ENST00000544738 SCLYQ96I15 445 aa19.11■□□□□ 0.65
DDX55-212ENST00000544738 NOC4LQ9BVI4 516 aaKnown RBP19.11■□□□□ 0.65
DDX55-212ENST00000544738 HIP1O00291 1037 aa19.1■□□□□ 0.65
DDX55-212ENST00000544738 CTAGE5O15320 804 aa19.1■□□□□ 0.65
DDX55-212ENST00000544738 NMT2O60551 498 aa19.1■□□□□ 0.65
DDX55-212ENST00000544738 POU3F3P20264 500 aaPredicted RBP19.1■□□□□ 0.65
DDX55-212ENST00000544738 NOVP48745 357 aa19.1■□□□□ 0.65
DDX55-212ENST00000544738 ZNF589Q86UQ0 364 aaPredicted RBP19.1■□□□□ 0.65
DDX55-212ENST00000544738 SLC43A3Q8NBI5 491 aa19.1■□□□□ 0.65
DDX55-212ENST00000544738 ARNTL2Q8WYA1 636 aa19.1■□□□□ 0.65
DDX55-212ENST00000544738 WNT8AQ9H1J5 351 aa19.1■□□□□ 0.65
DDX55-212ENST00000544738 SUPT16HQ9Y5B9 1047 aaKnown RBP19.1■□□□□ 0.65
DDX55-212ENST00000544738 GBF1Q92538 1859 aa19.09■□□□□ 0.65
DDX55-212ENST00000544738 EPOPA6NHQ4 379 aa19.09■□□□□ 0.65
DDX55-212ENST00000544738 TTLL4Q14679 1199 aa19.09■□□□□ 0.65
DDX55-212ENST00000544738 TKFCQ3LXA3 575 aa19.09■□□□□ 0.65
DDX55-212ENST00000544738 RRP12Q5JTH9 1297 aaKnown RBP19.09■□□□□ 0.65
DDX55-212ENST00000544738 ARMCX2Q7L311 632 aa19.09■□□□□ 0.65
DDX55-212ENST00000544738 DIAPH3Q9NSV4 1193 aa19.09■□□□□ 0.65
DDX55-212ENST00000544738 TCP11L1Q9NUJ3 509 aa19.09■□□□□ 0.65
DDX55-212ENST00000544738 B4GALT4O60513 344 aa19.08■□□□□ 0.64
DDX55-212ENST00000544738 CABYRO75952 493 aa19.08■□□□□ 0.64
DDX55-212ENST00000544738 TNFAIP2Q03169 654 aa19.08■□□□□ 0.64
DDX55-212ENST00000544738 MFSD6Q6ZSS7 791 aa19.08■□□□□ 0.64
DDX55-212ENST00000544738 CCDC144CPQ8IYA2 1237 aa19.08■□□□□ 0.64
DDX55-212ENST00000544738 DCAF4Q8WV16 495 aa19.08■□□□□ 0.64
DDX55-212ENST00000544738 RNF41Q9H4P4 317 aaPredicted RBP19.08■□□□□ 0.64
DDX55-212ENST00000544738 ACAD9Q9H845 621 aa19.08■□□□□ 0.64
DDX55-212ENST00000544738 GRIN2DO15399 1336 aa19.07■□□□□ 0.64
DDX55-212ENST00000544738 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.07■□□□□ 0.64
DDX55-212ENST00000544738 PI4K2BG5E9Z4 385 aa19.07■□□□□ 0.64
DDX55-212ENST00000544738 TOP1P11387 765 aaKnown RBP19.07■□□□□ 0.64
DDX55-212ENST00000544738 NT5C2P49902 561 aa19.07■□□□□ 0.64
DDX55-212ENST00000544738 KCTD1Q719H9 257 aa19.07■□□□□ 0.64
DDX55-212ENST00000544738 DEFB128Q7Z7B8 93 aa19.07■□□□□ 0.64
DDX55-212ENST00000544738 TTC14Q96N46 770 aa19.07■□□□□ 0.64
DDX55-212ENST00000544738 UIMC1Q96RL1 719 aa19.07■□□□□ 0.64
DDX55-212ENST00000544738 AP5M1Q9H0R1 490 aa19.07■□□□□ 0.64
DDX55-212ENST00000544738 CD320Q9NPF0 282 aa19.07■□□□□ 0.64
DDX55-212ENST00000544738 DYNC1LI2O43237 492 aaPredicted RBP19.06■□□□□ 0.64
DDX55-212ENST00000544738 HAND2P61296 217 aa19.06■□□□□ 0.64
DDX55-212ENST00000544738 PSMC6P62333 389 aa19.06■□□□□ 0.64
DDX55-212ENST00000544738 FSCN1Q16658 493 aaKnown RBP19.06■□□□□ 0.64
DDX55-212ENST00000544738 CWC27Q6UX04 472 aaKnown RBP19.06■□□□□ 0.64
DDX55-212ENST00000544738 CHMP4CQ96CF2 233 aa19.06■□□□□ 0.64
DDX55-212ENST00000544738 VWCEQ96DN2 955 aa19.06■□□□□ 0.64
DDX55-212ENST00000544738 FGD4Q96M96 766 aa19.06■□□□□ 0.64
DDX55-212ENST00000544738 AGBL1Q96MI9 1066 aa19.06■□□□□ 0.64
DDX55-212ENST00000544738 HOMER2Q9NSB8 354 aa19.06■□□□□ 0.64
DDX55-212ENST00000544738 PRR12Q9ULL5 1215 aa19.06■□□□□ 0.64
DDX55-212ENST00000544738 ASTN1O14525 1302 aa19.05■□□□□ 0.64
DDX55-212ENST00000544738 ZNF536O15090 1300 aa19.05■□□□□ 0.64
DDX55-212ENST00000544738 ZNF213O14771 459 aa19.05■□□□□ 0.64
DDX55-212ENST00000544738 ZEB2O60315 1214 aa19.05■□□□□ 0.64
DDX55-212ENST00000544738 PTGS1P23219 599 aa19.05■□□□□ 0.64
DDX55-212ENST00000544738 MRE11P49959 708 aa19.05■□□□□ 0.64
DDX55-212ENST00000544738 NKX3-2P78367 333 aa19.05■□□□□ 0.64
DDX55-212ENST00000544738 CCDC96Q2M329 555 aa19.05■□□□□ 0.64
DDX55-212ENST00000544738 TRERF1Q96PN7 1200 aa19.05■□□□□ 0.64
DDX55-212ENST00000544738 TMEM47Q9BQJ4 181 aa19.05■□□□□ 0.64
DDX55-212ENST00000544738 RNF146Q9NTX7 359 aa19.05■□□□□ 0.64
DDX55-212ENST00000544738 MTMR7Q9Y216 660 aa19.05■□□□□ 0.64
DDX55-212ENST00000544738 ALAS1P13196 640 aa19.04■□□□□ 0.64
DDX55-212ENST00000544738 CNTN2Q02246 1040 aa19.04■□□□□ 0.64
DDX55-212ENST00000544738 TAP1Q03518 808 aa19.04■□□□□ 0.64
DDX55-212ENST00000544738 BTNL9Q6UXG8 535 aa19.04■□□□□ 0.64
DDX55-212ENST00000544738 TLK2Q86UE8 772 aa19.04■□□□□ 0.64
DDX55-212ENST00000544738 ESR2Q92731 530 aa19.04■□□□□ 0.64
DDX55-212ENST00000544738 KATNBL1Q9H079 304 aa19.04■□□□□ 0.64
DDX55-212ENST00000544738 ARHGEF15O94989 841 aa19.03■□□□□ 0.64
DDX55-212ENST00000544738 CYP2C9P11712 490 aa19.03■□□□□ 0.64
DDX55-212ENST00000544738 ACTN1P12814 892 aa19.03■□□□□ 0.64
DDX55-212ENST00000544738 GRB10Q13322 594 aa19.03■□□□□ 0.64
DDX55-212ENST00000544738 CCDC178Q5BJE1 867 aa19.03■□□□□ 0.64
DDX55-212ENST00000544738 DSCC1Q9BVC3 393 aa19.03■□□□□ 0.64
DDX55-212ENST00000544738 SEZ6LQ9BYH1 1024 aa19.03■□□□□ 0.64
DDX55-212ENST00000544738 A1CFQ9NQ94 594 aaKnown RBP19.03■□□□□ 0.64
DDX55-212ENST00000544738 PNMA2Q9UL42 364 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms