RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 CWC27Q6UX04 472 aaKnown RBP23.07■■□□□ 1.28
CACNA1C-230ENST00000543114 KIAA1211Q6ZU35 1233 aa23.07■■□□□ 1.28
CACNA1C-230ENST00000543114 C16orf59Q7L2K0 433 aa23.07■■□□□ 1.28
CACNA1C-230ENST00000543114 EXOC6Q8TAG9 804 aa23.07■■□□□ 1.28
CACNA1C-230ENST00000543114 ESR2Q92731 530 aa23.07■■□□□ 1.28
CACNA1C-230ENST00000543114 ADD3Q9UEY8 706 aaKnown RBP23.07■■□□□ 1.28
CACNA1C-230ENST00000543114 WDR19Q8NEZ3 1342 aa23.07■■□□□ 1.28
CACNA1C-230ENST00000543114 DNAJB2P25686 324 aa23.06■■□□□ 1.28
CACNA1C-230ENST00000543114 CALML3P27482 149 aa23.06■■□□□ 1.28
CACNA1C-230ENST00000543114 ITGA7Q13683 1181 aa23.06■■□□□ 1.28
CACNA1C-230ENST00000543114 TMEM199Q8N511 208 aa23.06■■□□□ 1.28
CACNA1C-230ENST00000543114 CPVLQ9H3G5 476 aa23.06■■□□□ 1.28
CACNA1C-230ENST00000543114 Q9Y3F1 56 aa23.06■■□□□ 1.28
CACNA1C-230ENST00000543114 MYH6P13533 1939 aa23.06■■□□□ 1.28
CACNA1C-230ENST00000543114 UMODL1Q5DID0 1318 aa23.06■■□□□ 1.28
CACNA1C-230ENST00000543114 ZNF213O14771 459 aa23.05■■□□□ 1.28
CACNA1C-230ENST00000543114 ZEB2O60315 1214 aa23.05■■□□□ 1.28
CACNA1C-230ENST00000543114 GOLGA8HP0CJ92 632 aa23.05■■□□□ 1.28
CACNA1C-230ENST00000543114 ACRP10323 421 aa23.05■■□□□ 1.28
CACNA1C-230ENST00000543114 CYP2C18P33260 490 aa23.05■■□□□ 1.28
CACNA1C-230ENST00000543114 PSMC6P62333 389 aa23.05■■□□□ 1.28
CACNA1C-230ENST00000543114 DUSP28Q4G0W2 176 aa23.05■■□□□ 1.28
CACNA1C-230ENST00000543114 MAFAQ8NHW3 353 aaPredicted RBP23.05■■□□□ 1.28
CACNA1C-230ENST00000543114 DIAPH3Q9NSV4 1193 aa23.05■■□□□ 1.28
CACNA1C-230ENST00000543114 GBF1Q92538 1859 aa23.05■■□□□ 1.28
CACNA1C-230ENST00000543114 LOC102724159A0A0B4J2E5 919 aa23.04■■□□□ 1.28
CACNA1C-230ENST00000543114 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.04■■□□□ 1.28
CACNA1C-230ENST00000543114 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.04■■□□□ 1.28
CACNA1C-230ENST00000543114 RPS6P62753 249 aaKnown RBP23.04■■□□□ 1.28
CACNA1C-230ENST00000543114 PWP2Q15269 919 aaKnown RBP23.04■■□□□ 1.28
CACNA1C-230ENST00000543114 RASIP1Q5U651 963 aa23.04■■□□□ 1.28
CACNA1C-230ENST00000543114 RNF207Q6ZRF8 634 aa23.04■■□□□ 1.28
CACNA1C-230ENST00000543114 WDR11Q9BZH6 1224 aa23.04■■□□□ 1.28
CACNA1C-230ENST00000543114 HIPK3Q9H422 1215 aa23.04■■□□□ 1.28
CACNA1C-230ENST00000543114 SCN10AQ9Y5Y9 1956 aa23.03■■□□□ 1.28
CACNA1C-230ENST00000543114 B4GALT4O60513 344 aa23.03■■□□□ 1.28
CACNA1C-230ENST00000543114 KDM4AO75164 1064 aa23.03■■□□□ 1.28
CACNA1C-230ENST00000543114 GPATCH4Q5T3I0 446 aaKnown RBP23.03■■□□□ 1.28
CACNA1C-230ENST00000543114 PSRC1Q6PGN9 363 aaPredicted RBP23.03■■□□□ 1.28
CACNA1C-230ENST00000543114 ZNF365Q70YC5 407 aa23.03■■□□□ 1.28
CACNA1C-230ENST00000543114 DGKHQ86XP1 1220 aa23.03■■□□□ 1.28
CACNA1C-230ENST00000543114 TRPV6Q9H1D0 765 aa23.03■■□□□ 1.28
CACNA1C-230ENST00000543114 PNMA2Q9UL42 364 aa23.03■■□□□ 1.28
CACNA1C-230ENST00000543114 CHD9Q3L8U1 2897 aa23.03■■□□□ 1.28
CACNA1C-230ENST00000543114 RBM47A0AV96 593 aaKnown RBP23.02■■□□□ 1.28
CACNA1C-230ENST00000543114 FOSL2P15408 326 aa23.02■■□□□ 1.28
CACNA1C-230ENST00000543114 EDNRBP24530 442 aa23.02■■□□□ 1.28
CACNA1C-230ENST00000543114 USH1GQ495M9 461 aa23.02■■□□□ 1.28
CACNA1C-230ENST00000543114 PNMA1Q8ND90 353 aa23.02■■□□□ 1.28
CACNA1C-230ENST00000543114 NOC4LQ9BVI4 516 aaKnown RBP23.02■■□□□ 1.28
CACNA1C-230ENST00000543114 UBA5Q9GZZ9 404 aa23.02■■□□□ 1.28
CACNA1C-230ENST00000543114 GRXCR1A8MXD5 290 aa23.01■■□□□ 1.27
CACNA1C-230ENST00000543114 B4E1Z4 1266 aa23.01■■□□□ 1.27
CACNA1C-230ENST00000543114 GRIN2CQ14957 1233 aa23.01■■□□□ 1.27
CACNA1C-230ENST00000543114 IQCA1Q86XH1 822 aa23.01■■□□□ 1.27
CACNA1C-230ENST00000543114 TIFAQ96CG3 184 aa23.01■■□□□ 1.27
CACNA1C-230ENST00000543114 DSCC1Q9BVC3 393 aa23.01■■□□□ 1.27
CACNA1C-230ENST00000543114 IL25Q9H293 177 aa23.01■■□□□ 1.27
CACNA1C-230ENST00000543114 IL23AQ9NPF7 189 aa23.01■■□□□ 1.27
CACNA1C-230ENST00000543114 HIP1O00291 1037 aa23■■□□□ 1.27
CACNA1C-230ENST00000543114 PBX2P40425 430 aa23■■□□□ 1.27
CACNA1C-230ENST00000543114 NT5C2P49902 561 aa23■■□□□ 1.27
CACNA1C-230ENST00000543114 PURAQ00577 322 aaKnown RBP23■■□□□ 1.27
CACNA1C-230ENST00000543114 PDE4DQ08499 809 aa23■■□□□ 1.27
CACNA1C-230ENST00000543114 CDC37Q16543 378 aaPredicted RBP23■■□□□ 1.27
CACNA1C-230ENST00000543114 OR6J1Q8NGC5 347 aa23■■□□□ 1.27
CACNA1C-230ENST00000543114 COL25A1Q9BXS0 654 aaPredicted RBP23■■□□□ 1.27
CACNA1C-230ENST00000543114 PBX4Q9BYU1 374 aa23■■□□□ 1.27
CACNA1C-230ENST00000543114 WNT8AQ9H1J5 351 aa23■■□□□ 1.27
CACNA1C-230ENST00000543114 ALDH8A1Q9H2A2 487 aaPredicted RBP23■■□□□ 1.27
CACNA1C-230ENST00000543114 SPTBN5Q9NRC6 3674 aaKnown RBP22.99■■□□□ 1.27
CACNA1C-230ENST00000543114 CCL23P55773 120 aa22.99■■□□□ 1.27
CACNA1C-230ENST00000543114 PPP2R5BQ15173 497 aa22.99■■□□□ 1.27
CACNA1C-230ENST00000543114 ENAHQ8N8S7 591 aaPredicted RBP22.99■■□□□ 1.27
CACNA1C-230ENST00000543114 DNERQ8NFT8 737 aa22.99■■□□□ 1.27
CACNA1C-230ENST00000543114 ZSCAN10Q96SZ4 725 aaPredicted RBP22.99■■□□□ 1.27
CACNA1C-230ENST00000543114 SEZ6LQ9BYH1 1024 aa22.99■■□□□ 1.27
CACNA1C-230ENST00000543114 ZNF576Q9H609 170 aa22.99■■□□□ 1.27
CACNA1C-230ENST00000543114 KAT14Q9H8E8 782 aa22.99■■□□□ 1.27
CACNA1C-230ENST00000543114 CXXC1Q9P0U4 656 aaPredicted RBP22.99■■□□□ 1.27
CACNA1C-230ENST00000543114 CHD7Q9P2D1 2997 aa22.99■■□□□ 1.27
CACNA1C-230ENST00000543114 TNKSO95271 1327 aa22.99■■□□□ 1.27
CACNA1C-230ENST00000543114 TANC1Q9C0D5 1861 aa22.98■■□□□ 1.27
CACNA1C-230ENST00000543114 KIAA1217Q5T5P2 1943 aa22.98■■□□□ 1.27
CACNA1C-230ENST00000543114 SCN5AQ14524 2016 aa22.98■■□□□ 1.27
CACNA1C-230ENST00000543114 CPT1AP50416 773 aa22.98■■□□□ 1.27
CACNA1C-230ENST00000543114 IMMTQ16891 758 aaKnown RBP22.98■■□□□ 1.27
CACNA1C-230ENST00000543114 ANKS1AQ92625 1134 aa22.98■■□□□ 1.27
CACNA1C-230ENST00000543114 COPS5Q92905 334 aa22.98■■□□□ 1.27
CACNA1C-230ENST00000543114 TRMT13Q9NUP7 481 aaKnown RBP22.98■■□□□ 1.27
CACNA1C-230ENST00000543114 POLR3EQ9NVU0 708 aa22.98■■□□□ 1.27
CACNA1C-230ENST00000543114 MYO9BQ13459 2157 aa22.98■■□□□ 1.27
CACNA1C-230ENST00000543114 MYL3P08590 195 aa22.97■■□□□ 1.27
CACNA1C-230ENST00000543114 CCDC178Q5BJE1 867 aa22.97■■□□□ 1.27
CACNA1C-230ENST00000543114 ADGRF4Q8IZF3 695 aa22.97■■□□□ 1.27
CACNA1C-230ENST00000543114 SCFD2Q8WU76 684 aa22.97■■□□□ 1.27
CACNA1C-230ENST00000543114 HERVK_113Q902F9 699 aa22.97■■□□□ 1.27
CACNA1C-230ENST00000543114 MPHOSPH6Q99547 160 aaKnown RBP22.97■■□□□ 1.27
CACNA1C-230ENST00000543114 ZSWIM5Q9P217 1185 aa22.97■■□□□ 1.27
CACNA1C-230ENST00000543114 NKRFO15226 690 aaKnown RBP eCLIP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms