RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 NUP133Q8WUM0 1156 aa10.77□□□□□ -0.68
TCF4-208ENST00000543082 EPB41L5Q9HCM4 733 aa10.77□□□□□ -0.68
TCF4-208ENST00000543082 PPANQ9NQ55 473 aaKnown RBP10.77□□□□□ -0.68
TCF4-208ENST00000543082 INCENPQ9NQS7 918 aa10.77□□□□□ -0.68
TCF4-208ENST00000543082 FAM153AQ9UHL3 310 aa10.77□□□□□ -0.68
TCF4-208ENST00000543082 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.77□□□□□ -0.68
TCF4-208ENST00000543082 AXIN2Q9Y2T1 843 aa10.77□□□□□ -0.68
TCF4-208ENST00000543082 UBR2Q8IWV8 1755 aa10.77□□□□□ -0.69
TCF4-208ENST00000543082 TCRBV5S4A2TA0A5A2 114 aa10.77□□□□□ -0.69
TCF4-208ENST00000543082 C5orf60A6NFR6 353 aa10.77□□□□□ -0.69
TCF4-208ENST00000543082 RASSF10A6NK89 507 aa10.77□□□□□ -0.69
TCF4-208ENST00000543082 RTN2O75298 545 aa10.77□□□□□ -0.69
TCF4-208ENST00000543082 DNAJC8O75937 253 aaPredicted RBP10.77□□□□□ -0.69
TCF4-208ENST00000543082 GLI1P08151 1106 aa10.77□□□□□ -0.69
TCF4-208ENST00000543082 GHRP10912 638 aa10.77□□□□□ -0.69
TCF4-208ENST00000543082 GBP2P32456 591 aaPredicted RBP10.77□□□□□ -0.69
TCF4-208ENST00000543082 STAT6P42226 847 aa10.77□□□□□ -0.69
TCF4-208ENST00000543082 KIF11P52732 1056 aa10.77□□□□□ -0.69
TCF4-208ENST00000543082 GUCY2DQ02846 1103 aa10.77□□□□□ -0.69
TCF4-208ENST00000543082 C11orf91Q3C1V1 193 aa10.77□□□□□ -0.69
TCF4-208ENST00000543082 RCSD1Q6JBY9 416 aa10.77□□□□□ -0.69
TCF4-208ENST00000543082 IFNL2Q8IZJ0 200 aa10.77□□□□□ -0.69
TCF4-208ENST00000543082 CACNA2D3Q8IZS8 1091 aa10.77□□□□□ -0.69
TCF4-208ENST00000543082 IFT81Q8WYA0 676 aa10.77□□□□□ -0.69
TCF4-208ENST00000543082 ARAP2Q8WZ64 1704 aa10.77□□□□□ -0.69
TCF4-208ENST00000543082 SHISA4Q96DD7 197 aa10.77□□□□□ -0.69
TCF4-208ENST00000543082 RSRC1Q96IZ7 334 aaKnown RBP10.77□□□□□ -0.69
TCF4-208ENST00000543082 DCAF5Q96JK2 942 aa10.77□□□□□ -0.69
TCF4-208ENST00000543082 ERGIC2Q96RQ1 377 aa10.77□□□□□ -0.69
TCF4-208ENST00000543082 OSBPL7Q9BZF2 842 aa10.77□□□□□ -0.69
TCF4-208ENST00000543082 POLD4Q9HCU8 107 aa10.77□□□□□ -0.69
TCF4-208ENST00000543082 PLCB1Q9NQ66 1216 aa10.77□□□□□ -0.69
TCF4-208ENST00000543082 SMARCAL1Q9NZC9 954 aa10.77□□□□□ -0.69
TCF4-208ENST00000543082 EHD2Q9NZN4 543 aa10.77□□□□□ -0.69
TCF4-208ENST00000543082 PLAAQ9Y263 795 aa10.77□□□□□ -0.69
TCF4-208ENST00000543082 KIF13AQ9H1H9 1805 aa10.77□□□□□ -0.69
TCF4-208ENST00000543082 ALS2Q96Q42 1657 aa10.77□□□□□ -0.69
TCF4-208ENST00000543082 GRID2IPA4D2P6 1211 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 GCOM1H8Y6P7 765 aaPredicted RBP10.76□□□□□ -0.69
TCF4-208ENST00000543082 WNT7AO00755 349 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 PJA2O43164 708 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 TRAPPC3O43617 180 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 MGRN1O60291 552 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 SSBP05455 408 aaKnown RBP eCLIP10.76□□□□□ -0.69
TCF4-208ENST00000543082 MYL1P05976 194 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 MYZAPP0CAP1 466 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 CXCR5P32302 372 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 SCTRP47872 440 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 TRAPPC10P48553 1259 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 PMS1P54277 932 aaKnown RBP10.76□□□□□ -0.69
TCF4-208ENST00000543082 TCIRG1Q13488 830 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 BIRC3Q13489 604 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 RRP12Q5JTH9 1297 aaKnown RBP10.76□□□□□ -0.69
TCF4-208ENST00000543082 FKBP15Q5T1M5 1219 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 CYB5RLQ6IPT4 315 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 TTI2Q6NXR4 508 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 KRT26Q7Z3Y9 468 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 EIF1ADQ8N9N8 165 aaKnown RBP10.76□□□□□ -0.69
TCF4-208ENST00000543082 TNFRSF25Q93038 417 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 HOOK2Q96ED9 719 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 DHTKD1Q96HY7 919 aaPredicted RBP10.76□□□□□ -0.69
TCF4-208ENST00000543082 UBAC1Q9BSL1 405 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 PLAGL2Q9UPG8 496 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 DLEC1Q9Y238 1755 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 BICDL2A1A5D9 508 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 DNM1LO00429 736 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 PRPF3O43395 683 aaKnown RBP10.76□□□□□ -0.69
TCF4-208ENST00000543082 TATP17735 454 aaPredicted RBP10.76□□□□□ -0.69
TCF4-208ENST00000543082 HPDP32754 393 aaPredicted RBP10.76□□□□□ -0.69
TCF4-208ENST00000543082 LONP1P36776 959 aaKnown RBP10.76□□□□□ -0.69
TCF4-208ENST00000543082 KLK7P49862 253 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 GUCY2FP51841 1108 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 PKN1Q16512 942 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 TTLL7Q6ZT98 887 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 CSGALNACT2Q8N6G5 542 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 MAB21L3Q8N8X9 362 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 SEC16BQ96JE7 1060 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 NOX5Q96PH1 765 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 PSMB7Q99436 277 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 ZKSCAN3Q9BRR0 538 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 TLR10Q9BXR5 811 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 RNF41Q9H4P4 317 aaPredicted RBP10.76□□□□□ -0.69
TCF4-208ENST00000543082 BATF3Q9NR55 127 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 TACC3Q9Y6A5 838 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 PLCH1Q4KWH8 1693 aa10.76□□□□□ -0.69
TCF4-208ENST00000543082 NBPF26B4DH59 902 aa10.75□□□□□ -0.69
TCF4-208ENST00000543082 NCK2O43639 380 aa10.75□□□□□ -0.69
TCF4-208ENST00000543082 PAEPP09466 180 aa10.75□□□□□ -0.69
TCF4-208ENST00000543082 IBSPP21815 317 aaPredicted RBP10.75□□□□□ -0.69
TCF4-208ENST00000543082 MTIF2P46199 727 aaKnown RBP10.75□□□□□ -0.69
TCF4-208ENST00000543082 NAA25Q14CX7 972 aa10.75□□□□□ -0.69
TCF4-208ENST00000543082 E2F5Q15329 346 aa10.75□□□□□ -0.69
TCF4-208ENST00000543082 CDC37Q16543 378 aaPredicted RBP10.75□□□□□ -0.69
TCF4-208ENST00000543082 ESCO1Q5FWF5 840 aa10.75□□□□□ -0.69
TCF4-208ENST00000543082 METTL24Q5JXM2 366 aa10.75□□□□□ -0.69
TCF4-208ENST00000543082 ARL6IP4Q66PJ3 421 aaKnown RBP10.75□□□□□ -0.69
TCF4-208ENST00000543082 MSL1Q68DK7 614 aa10.75□□□□□ -0.69
TCF4-208ENST00000543082 TYW1BQ6NUM6 668 aa10.75□□□□□ -0.69
TCF4-208ENST00000543082 NBPF10Q6P3W6 841 aaKnown RBP10.75□□□□□ -0.69
TCF4-208ENST00000543082 RUFY4Q6ZNE9 571 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms