RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 ANAPC16Q96DE5 110 aa7.82□□□□□ -1.16
XRCC4-206ENST00000542685 CGGBP1Q9UFW8 167 aaPredicted RBP7.82□□□□□ -1.16
XRCC4-206ENST00000542685 ERICH3Q5RHP9 1530 aa7.82□□□□□ -1.16
XRCC4-206ENST00000542685 IRS4O14654 1257 aaPredicted RBP7.81□□□□□ -1.16
XRCC4-206ENST00000542685 MAPKAPK2P49137 400 aa7.81□□□□□ -1.16
XRCC4-206ENST00000542685 AFF3P51826 1226 aaKnown RBP7.81□□□□□ -1.16
XRCC4-206ENST00000542685 CASP7P55210 303 aa7.81□□□□□ -1.16
XRCC4-206ENST00000542685 ZNF200P98182 395 aaPredicted RBP7.81□□□□□ -1.16
XRCC4-206ENST00000542685 EEF1DP3Q658K8 133 aa7.81□□□□□ -1.16
XRCC4-206ENST00000542685 RCSD1Q6JBY9 416 aa7.81□□□□□ -1.16
XRCC4-206ENST00000542685 VHLLQ6RSH7 139 aa7.81□□□□□ -1.16
XRCC4-206ENST00000542685 TMEFF1Q8IYR6 380 aa7.81□□□□□ -1.16
XRCC4-206ENST00000542685 ZCCHC4Q9H5U6 513 aa7.81□□□□□ -1.16
XRCC4-206ENST00000542685 EPB41L4AQ9HCS5 686 aaPredicted RBP7.81□□□□□ -1.16
XRCC4-206ENST00000542685 PCDHA5Q9Y5H7 936 aa7.81□□□□□ -1.16
XRCC4-206ENST00000542685 HCFC2Q9Y5Z7 792 aa7.81□□□□□ -1.16
XRCC4-206ENST00000542685 AURKAO14965 403 aa7.8□□□□□ -1.16
XRCC4-206ENST00000542685 CYBBP04839 570 aa7.8□□□□□ -1.16
XRCC4-206ENST00000542685 DBHP09172 617 aa7.8□□□□□ -1.16
XRCC4-206ENST00000542685 SEPHS1P49903 392 aa7.8□□□□□ -1.16
XRCC4-206ENST00000542685 CNKSR3Q6P9H4 555 aa7.8□□□□□ -1.16
XRCC4-206ENST00000542685 PAQR3Q6TCH7 311 aa7.8□□□□□ -1.16
XRCC4-206ENST00000542685 ARHGEF39Q8N4T4 335 aa7.8□□□□□ -1.16
XRCC4-206ENST00000542685 DACT3Q96B18 629 aaPredicted RBP7.8□□□□□ -1.16
XRCC4-206ENST00000542685 KRTAP4-7Q9BYR0 210 aa7.8□□□□□ -1.16
XRCC4-206ENST00000542685 SUSD2Q9UGT4 822 aa7.8□□□□□ -1.16
XRCC4-206ENST00000542685 C2orf71A6NGG8 1288 aa7.79□□□□□ -1.16
XRCC4-206ENST00000542685 F8W031 263 aaPredicted RBP7.79□□□□□ -1.16
XRCC4-206ENST00000542685 BUB1BO60566 1050 aaPredicted RBP7.79□□□□□ -1.16
XRCC4-206ENST00000542685 CORO7P57737 925 aa7.79□□□□□ -1.16
XRCC4-206ENST00000542685 AMPD2Q01433 879 aa7.79□□□□□ -1.16
XRCC4-206ENST00000542685 VMACQ2NL98 169 aa7.79□□□□□ -1.16
XRCC4-206ENST00000542685 RCC1LQ96I51 464 aaKnown RBP7.79□□□□□ -1.16
XRCC4-206ENST00000542685 PARD6AQ9NPB6 346 aa7.79□□□□□ -1.16
XRCC4-206ENST00000542685 USP35Q9P2H5 1018 aa7.79□□□□□ -1.16
XRCC4-206ENST00000542685 DBR1Q9UK59 544 aaKnown RBP7.79□□□□□ -1.16
XRCC4-206ENST00000542685 BACE2Q9Y5Z0 518 aa7.79□□□□□ -1.16
XRCC4-206ENST00000542685 BIVM-ERCC5R4GMW8 1640 aa7.78□□□□□ -1.16
XRCC4-206ENST00000542685 ANKRD34BA5PLL1 514 aa7.78□□□□□ -1.16
XRCC4-206ENST00000542685 SRGAP3O43295 1099 aa7.78□□□□□ -1.16
XRCC4-206ENST00000542685 TRIM13O60858 407 aa7.78□□□□□ -1.16
XRCC4-206ENST00000542685 FAM129CQ86XR2 697 aa7.78□□□□□ -1.16
XRCC4-206ENST00000542685 CCDC136Q96JN2 1154 aa7.78□□□□□ -1.16
XRCC4-206ENST00000542685 APEX2Q9UBZ4 518 aa7.78□□□□□ -1.16
XRCC4-206ENST00000542685 STRIP2Q9ULQ0 834 aa7.78□□□□□ -1.16
XRCC4-206ENST00000542685 AKT3Q9Y243 479 aa7.78□□□□□ -1.16
XRCC4-206ENST00000542685 SOGA1O94964 1423 aa7.78□□□□□ -1.16
XRCC4-206ENST00000542685 ZC3H12DA2A288 527 aaKnown RBP7.77□□□□□ -1.17
XRCC4-206ENST00000542685 HOXA5P20719 270 aa7.77□□□□□ -1.17
XRCC4-206ENST00000542685 GRB10Q13322 594 aa7.77□□□□□ -1.17
XRCC4-206ENST00000542685 CPNE8Q86YQ8 564 aa7.77□□□□□ -1.17
XRCC4-206ENST00000542685 MARCH10Q8NA82 808 aaPredicted RBP7.77□□□□□ -1.17
XRCC4-206ENST00000542685 NLGN2Q8NFZ4 835 aa7.77□□□□□ -1.17
XRCC4-206ENST00000542685 PWWP2AQ96N64 755 aa7.77□□□□□ -1.17
XRCC4-206ENST00000542685 RXFP1Q9HBX9 757 aa7.77□□□□□ -1.17
XRCC4-206ENST00000542685 PLA2G2DQ9UNK4 145 aa7.77□□□□□ -1.17
XRCC4-206ENST00000542685 RWDD3Q9Y3V2 267 aa7.77□□□□□ -1.17
XRCC4-206ENST00000542685 KRTAP9-7A8MTY7 169 aa7.76□□□□□ -1.17
XRCC4-206ENST00000542685 KCNH1O95259 989 aa7.76□□□□□ -1.17
XRCC4-206ENST00000542685 ATF4P18848 351 aaPredicted RBP7.76□□□□□ -1.17
XRCC4-206ENST00000542685 LIMS1P48059 325 aa7.76□□□□□ -1.17
XRCC4-206ENST00000542685 CTSWP56202 376 aa7.76□□□□□ -1.17
XRCC4-206ENST00000542685 PRR5P85299 388 aa7.76□□□□□ -1.17
XRCC4-206ENST00000542685 LZTR1Q8N653 840 aa7.76□□□□□ -1.17
XRCC4-206ENST00000542685 PPP1R14AQ96A00 147 aa7.76□□□□□ -1.17
XRCC4-206ENST00000542685 APBA2Q99767 749 aa7.76□□□□□ -1.17
XRCC4-206ENST00000542685 RAPGEFL1Q9UHV5 662 aa7.76□□□□□ -1.17
XRCC4-206ENST00000542685 CDK11AQ9UQ88 783 aaPredicted RBP7.76□□□□□ -1.17
XRCC4-206ENST00000542685 MRVI1Q9Y6F6 885 aa7.76□□□□□ -1.17
XRCC4-206ENST00000542685 SYNJ1O43426 1573 aa7.76□□□□□ -1.17
XRCC4-206ENST00000542685 TOP2BQ02880 1626 aa7.75□□□□□ -1.17
XRCC4-206ENST00000542685 NPHP3-ACAD11A0A0J9YXS1 232 aa7.75□□□□□ -1.17
XRCC4-206ENST00000542685 PFKLP17858 780 aa7.75□□□□□ -1.17
XRCC4-206ENST00000542685 PAMP19021 973 aa7.75□□□□□ -1.17
XRCC4-206ENST00000542685 ERCC5P28715 1186 aaPredicted RBP7.75□□□□□ -1.17
XRCC4-206ENST00000542685 ZNF513Q8N8E2 541 aaPredicted RBP7.75□□□□□ -1.17
XRCC4-206ENST00000542685 KCNC2Q96PR1 638 aa7.75□□□□□ -1.17
XRCC4-206ENST00000542685 CAPN10Q9HC96 672 aa7.75□□□□□ -1.17
XRCC4-206ENST00000542685 GULP1Q9UBP9 304 aa7.75□□□□□ -1.17
XRCC4-206ENST00000542685 FBLN5Q9UBX5 448 aa7.75□□□□□ -1.17
XRCC4-206ENST00000542685 NOP58Q9Y2X3 529 aaKnown RBP7.75□□□□□ -1.17
XRCC4-206ENST00000542685 CLIP1P30622 1438 aa7.75□□□□□ -1.17
XRCC4-206ENST00000542685 IRS2Q9Y4H2 1338 aa7.75□□□□□ -1.17
XRCC4-206ENST00000542685 GLI4P10075 376 aa7.74□□□□□ -1.17
XRCC4-206ENST00000542685 TARBP2Q15633 366 aaKnown RBP7.74□□□□□ -1.17
XRCC4-206ENST00000542685 CABP7Q86V35 215 aa7.74□□□□□ -1.17
XRCC4-206ENST00000542685 BVESQ8NE79 360 aa7.74□□□□□ -1.17
XRCC4-206ENST00000542685 C20orf173Q96LM9 149 aa7.74□□□□□ -1.17
XRCC4-206ENST00000542685 LGR4Q9BXB1 951 aa7.74□□□□□ -1.17
XRCC4-206ENST00000542685 GPRC5CQ9NQ84 441 aa7.74□□□□□ -1.17
XRCC4-206ENST00000542685 EMC9Q9Y3B6 208 aa7.74□□□□□ -1.17
XRCC4-206ENST00000542685 WASHC2CQ9Y4E1 1318 aa7.74□□□□□ -1.17
XRCC4-206ENST00000542685 RRBP1Q9P2E9 1410 aaKnown RBP7.73□□□□□ -1.17
XRCC4-206ENST00000542685 NOP56O00567 594 aaKnown RBP7.73□□□□□ -1.17
XRCC4-206ENST00000542685 SMAD7O15105 426 aaKnown RBP7.73□□□□□ -1.17
XRCC4-206ENST00000542685 PPP1R11O60927 126 aaPredicted RBP7.73□□□□□ -1.17
XRCC4-206ENST00000542685 SSBP05455 408 aaKnown RBP eCLIP7.73□□□□□ -1.17
XRCC4-206ENST00000542685 IGFBP6P24592 240 aaPredicted RBP7.73□□□□□ -1.17
XRCC4-206ENST00000542685 NCAPHQ15003 741 aa7.73□□□□□ -1.17
XRCC4-206ENST00000542685 POMZP3Q6PJE2 187 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms