RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 KIFC2Q96AC6 838 aa11.77□□□□□ -0.53
CHFR-220ENST00000541817 PURBQ96QR8 312 aaKnown RBP11.77□□□□□ -0.53
CHFR-220ENST00000541817 RIOK1Q9BRS2 568 aaKnown RBP11.77□□□□□ -0.53
CHFR-220ENST00000541817 CTDP1Q9Y5B0 961 aaPredicted RBP11.77□□□□□ -0.53
CHFR-220ENST00000541817 MYO15AQ9UKN7 3530 aa11.77□□□□□ -0.53
CHFR-220ENST00000541817 MAGEB6P1A0A0J9YX57 407 aa11.76□□□□□ -0.53
CHFR-220ENST00000541817 PITPNM1O00562 1244 aa11.76□□□□□ -0.53
CHFR-220ENST00000541817 LINC01565O15544 149 aa11.76□□□□□ -0.53
CHFR-220ENST00000541817 PURAQ00577 322 aaKnown RBP11.76□□□□□ -0.53
CHFR-220ENST00000541817 TIGD5Q53EQ6 642 aa11.76□□□□□ -0.53
CHFR-220ENST00000541817 TNNI3KQ59H18 835 aa11.76□□□□□ -0.53
CHFR-220ENST00000541817 ADSSL1Q8N142 457 aa11.76□□□□□ -0.53
CHFR-220ENST00000541817 FAM133AQ8N9E0 248 aa11.76□□□□□ -0.53
CHFR-220ENST00000541817 CHMP4CQ96CF2 233 aa11.76□□□□□ -0.53
CHFR-220ENST00000541817 NSUN3Q9H649 340 aaKnown RBP11.76□□□□□ -0.53
CHFR-220ENST00000541817 IGFLR1Q9H665 355 aa11.76□□□□□ -0.53
CHFR-220ENST00000541817 GOPCQ9HD26 462 aa11.76□□□□□ -0.53
CHFR-220ENST00000541817 TLR7Q9NYK1 1049 aaKnown RBP11.76□□□□□ -0.53
CHFR-220ENST00000541817 NOD1Q9Y239 953 aa11.76□□□□□ -0.53
CHFR-220ENST00000541817 FPGT-TNNI3KV9GXZ4 949 aa11.76□□□□□ -0.53
CHFR-220ENST00000541817 MYO7AQ13402 2215 aa11.75□□□□□ -0.53
CHFR-220ENST00000541817 CACNA1BQ00975 2339 aa11.75□□□□□ -0.53
CHFR-220ENST00000541817 PNMA6EA0A0J9YXQ4 647 aa11.75□□□□□ -0.53
CHFR-220ENST00000541817 PROB1E7EW31 1015 aa11.75□□□□□ -0.53
CHFR-220ENST00000541817 NBNO60934 754 aa11.75□□□□□ -0.53
CHFR-220ENST00000541817 ZBED4O75132 1171 aa11.75□□□□□ -0.53
CHFR-220ENST00000541817 BFSP2Q13515 415 aa11.75□□□□□ -0.53
CHFR-220ENST00000541817 PKN1Q16512 942 aa11.75□□□□□ -0.53
CHFR-220ENST00000541817 IQSEC1Q6DN90 963 aa11.75□□□□□ -0.53
CHFR-220ENST00000541817 CNKSR3Q6P9H4 555 aa11.75□□□□□ -0.53
CHFR-220ENST00000541817 POP1Q99575 1024 aaKnown RBP11.75□□□□□ -0.53
CHFR-220ENST00000541817 MTG1Q9BT17 334 aaPredicted RBP11.75□□□□□ -0.53
CHFR-220ENST00000541817 CCDC8Q9H0W5 538 aaPredicted RBP11.75□□□□□ -0.53
CHFR-220ENST00000541817 POLR3EQ9NVU0 708 aa11.75□□□□□ -0.53
CHFR-220ENST00000541817 CTNNA3Q9UI47 895 aa11.75□□□□□ -0.53
CHFR-220ENST00000541817 BAZ2AQ9UIF9 1905 aaKnown RBP11.75□□□□□ -0.53
CHFR-220ENST00000541817 VPS13AQ96RL7 3174 aa11.74□□□□□ -0.53
CHFR-220ENST00000541817 PRKAB2O43741 272 aa11.74□□□□□ -0.53
CHFR-220ENST00000541817 TBX10O75333 385 aa11.74□□□□□ -0.53
CHFR-220ENST00000541817 CDK8P49336 464 aa11.74□□□□□ -0.53
CHFR-220ENST00000541817 HYAL1Q12794 435 aa11.74□□□□□ -0.53
CHFR-220ENST00000541817 COL19A1Q14993 1142 aa11.74□□□□□ -0.53
CHFR-220ENST00000541817 FRMD5Q7Z6J6 570 aa11.74□□□□□ -0.53
CHFR-220ENST00000541817 STK11IPQ8N1F8 1099 aa11.74□□□□□ -0.53
CHFR-220ENST00000541817 PRPF38AQ8NAV1 312 aaKnown RBP11.74□□□□□ -0.53
CHFR-220ENST00000541817 ASIC4Q96FT7 647 aa11.74□□□□□ -0.53
CHFR-220ENST00000541817 DCP1AQ9NPI6 582 aaPredicted RBP11.74□□□□□ -0.53
CHFR-220ENST00000541817 A1CFQ9NQ94 594 aaKnown RBP11.74□□□□□ -0.53
CHFR-220ENST00000541817 GPHNQ9NQX3 736 aaPredicted RBP11.74□□□□□ -0.53
CHFR-220ENST00000541817 SWAP70Q9UH65 585 aa11.74□□□□□ -0.53
CHFR-220ENST00000541817 COG6Q9Y2V7 657 aa11.74□□□□□ -0.53
CHFR-220ENST00000541817 ASB14A6NK59 587 aa11.73□□□□□ -0.53
CHFR-220ENST00000541817 H3BNC9 293 aa11.73□□□□□ -0.53
CHFR-220ENST00000541817 PTGISQ16647 500 aa11.73□□□□□ -0.53
CHFR-220ENST00000541817 SLFNL1Q499Z3 407 aa11.73□□□□□ -0.53
CHFR-220ENST00000541817 NLRC5Q86WI3 1866 aa11.73□□□□□ -0.53
CHFR-220ENST00000541817 CERS3Q8IU89 383 aa11.73□□□□□ -0.53
CHFR-220ENST00000541817 MYOCDQ8IZQ8 938 aa11.73□□□□□ -0.53
CHFR-220ENST00000541817 LCORLQ8N3X6 602 aa11.73□□□□□ -0.53
CHFR-220ENST00000541817 CHST13Q8NET6 341 aa11.73□□□□□ -0.53
CHFR-220ENST00000541817 OR6J1Q8NGC5 347 aa11.73□□□□□ -0.53
CHFR-220ENST00000541817 DHX38Q92620 1227 aaKnown RBP11.73□□□□□ -0.53
CHFR-220ENST00000541817 COPS5Q92905 334 aa11.73□□□□□ -0.53
CHFR-220ENST00000541817 RMDN1Q96DB5 314 aa11.73□□□□□ -0.53
CHFR-220ENST00000541817 CRNKL1Q9BZJ0 848 aaKnown RBP11.73□□□□□ -0.53
CHFR-220ENST00000541817 IRF2BPLQ9H1B7 796 aa11.73□□□□□ -0.53
CHFR-220ENST00000541817 NOB1Q9ULX3 412 aaKnown RBP11.73□□□□□ -0.53
CHFR-220ENST00000541817 Q9Y3F1 56 aa11.73□□□□□ -0.53
CHFR-220ENST00000541817 INSL6Q9Y581 213 aa11.73□□□□□ -0.53
CHFR-220ENST00000541817 SCN10AQ9Y5Y9 1956 aa11.72□□□□□ -0.53
CHFR-220ENST00000541817 UPP2O95045 317 aa11.72□□□□□ -0.53
CHFR-220ENST00000541817 NDUFB10O96000 172 aa11.72□□□□□ -0.53
CHFR-220ENST00000541817 SELPP16109 830 aa11.72□□□□□ -0.53
CHFR-220ENST00000541817 SNAP25P60880 206 aa11.72□□□□□ -0.53
CHFR-220ENST00000541817 SIGLEC14Q08ET2 396 aa11.72□□□□□ -0.53
CHFR-220ENST00000541817 SMAD4Q13485 552 aaKnown RBP11.72□□□□□ -0.53
CHFR-220ENST00000541817 CTC1Q2NKJ3 1217 aa11.72□□□□□ -0.53
CHFR-220ENST00000541817 GDF6Q6KF10 455 aaPredicted RBP11.72□□□□□ -0.53
CHFR-220ENST00000541817 LRRC8DQ7L1W4 858 aa11.72□□□□□ -0.53
CHFR-220ENST00000541817 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.72□□□□□ -0.53
CHFR-220ENST00000541817 TMEM192Q8IY95 271 aa11.72□□□□□ -0.53
CHFR-220ENST00000541817 CTAGE1Q96RT6 745 aa11.72□□□□□ -0.53
CHFR-220ENST00000541817 KANSL2Q9H9L4 492 aa11.72□□□□□ -0.53
CHFR-220ENST00000541817 SLC38A10Q9HBR0 1119 aa11.72□□□□□ -0.53
CHFR-220ENST00000541817 SMC4Q9NTJ3 1288 aa11.72□□□□□ -0.53
CHFR-220ENST00000541817 FBXO40Q9UH90 709 aa11.72□□□□□ -0.53
CHFR-220ENST00000541817 CD207Q9UJ71 328 aa11.72□□□□□ -0.53
CHFR-220ENST00000541817 DBNLQ9UJU6 430 aaKnown RBP11.72□□□□□ -0.53
CHFR-220ENST00000541817 CACNA1GO43497 2377 aa11.71□□□□□ -0.53
CHFR-220ENST00000541817 DMDP11532 3685 aa11.71□□□□□ -0.53
CHFR-220ENST00000541817 LCTP09848 1927 aa11.71□□□□□ -0.53
CHFR-220ENST00000541817 ABHD14A-ACY1A0A1B0GW23 586 aa11.71□□□□□ -0.53
CHFR-220ENST00000541817 F5H6K3 240 aa11.71□□□□□ -0.53
CHFR-220ENST00000541817 ATP2A1O14983 1001 aa11.71□□□□□ -0.53
CHFR-220ENST00000541817 GALR2O43603 387 aaPredicted RBP11.71□□□□□ -0.53
CHFR-220ENST00000541817 NBL1P41271 181 aa11.71□□□□□ -0.53
CHFR-220ENST00000541817 KLRC3Q07444 240 aa11.71□□□□□ -0.53
CHFR-220ENST00000541817 MTX1Q13505 466 aa11.71□□□□□ -0.53
CHFR-220ENST00000541817 IKBKEQ14164 716 aa11.71□□□□□ -0.53
CHFR-220ENST00000541817 DUSP28Q4G0W2 176 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms