RNA–Protein interactions for RNA: ENST00000541735.5

DMD-228, Transcript of dystrophin, humanhuman

TSL 5 BASIC

Gene DMD, Length 7,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-228ENST00000541735 YWHAHQ04917 246 aaPredicted RBP6.89□□□□□ -1.31
DMD-228ENST00000541735 ADALQ6DHV7 355 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 TRMT44Q8IYL2 757 aaKnown RBP6.89□□□□□ -1.31
DMD-228ENST00000541735 TSPYL6Q8N831 410 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 SLC7A3Q8WY07 619 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 NACC1Q96RE7 527 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 KRT82Q9NSB4 513 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 PANK4Q9NVE7 773 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 PNMA3Q9UL41 463 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 STK38LQ9Y2H1 464 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 IL16Q14005 1332 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 HMBSP08397 361 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 PDE6CP51160 858 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 VAV2P52735 878 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 PSMC5P62195 406 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 SNX1Q13596 522 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 LRRC23Q53EV4 343 aaPredicted RBP6.89□□□□□ -1.31
DMD-228ENST00000541735 TNNI3KQ59H18 835 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 LRCH2Q5VUJ6 765 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 DHX32Q7L7V1 743 aaKnown RBP6.89□□□□□ -1.31
DMD-228ENST00000541735 ELP3Q9H9T3 547 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 FBXL21Q9UKT6 434 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 YTHDC2Q9H6S0 1430 aaKnown RBP6.89□□□□□ -1.31
DMD-228ENST00000541735 BUB1O43683 1085 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 ALDH1L1O75891 902 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 ATXN3P54252 364 aaPredicted RBP6.89□□□□□ -1.31
DMD-228ENST00000541735 THOC5Q13769 683 aaKnown RBP6.89□□□□□ -1.31
DMD-228ENST00000541735 ZNF394Q53GI3 561 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 LGSNQ5TDP6 509 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 OR6B2Q6IFH4 312 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 RINT1Q6NUQ1 792 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 PDXDC2PQ6P474 469 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 G2E3Q7L622 706 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 THEM5Q8N1Q8 247 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 EDC3Q96F86 508 aaKnown RBP6.89□□□□□ -1.31
DMD-228ENST00000541735 TTC1Q99614 292 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 SMAD5Q99717 465 aaKnown RBP6.89□□□□□ -1.31
DMD-228ENST00000541735 ESYT1Q9BSJ8 1104 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 RIPOR2Q9Y4F9 1068 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 FAM196BA6NMK8 535 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 CYP2B6P20813 491 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 CTSWP56202 376 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 SYT10Q6XYQ8 523 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 C11orf96Q7Z7L8 435 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 ABHD8Q96I13 439 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 FAM227BQ96M60 508 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 NEUROG2Q9H2A3 272 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 SPON1Q9HCB6 807 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 KMT5AQ9NQR1 393 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 UHRF1BP1LA0JNW5 1464 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 NPM3O75607 178 aaKnown RBP6.89□□□□□ -1.31
DMD-228ENST00000541735 SYF2O95926 243 aaKnown RBP6.89□□□□□ -1.31
DMD-228ENST00000541735 YWHAGP61981 247 aaKnown RBP eCLIP6.89□□□□□ -1.31
DMD-228ENST00000541735 TTC19Q6DKK2 380 aaPredicted RBP6.89□□□□□ -1.31
DMD-228ENST00000541735 FRA10AC1Q70Z53 315 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 PEX26Q7Z412 305 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 SMAP1Q8IYB5 467 aaPredicted RBP6.89□□□□□ -1.31
DMD-228ENST00000541735 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.89□□□□□ -1.31
DMD-228ENST00000541735 SPON2Q9BUD6 331 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 TPCN1Q9ULQ1 816 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 ATP8B3O60423 1300 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 GOLGA8IPA6NC78 632 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 GOLGA8JA6NMD2 632 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 GTPBP6O43824 516 aaPredicted RBP6.89□□□□□ -1.31
DMD-228ENST00000541735 RNF8O76064 485 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 PHEXP78562 749 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 ATP8B2P98198 1209 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 CHRNDQ07001 517 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 PPARAQ07869 468 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 MAP7Q14244 749 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 RAB44Q7Z6P3 723 aaPredicted RBP6.89□□□□□ -1.31
DMD-228ENST00000541735 IGSF22Q8N9C0 903 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 PPHLN1Q8NEY8 458 aaKnown RBP6.89□□□□□ -1.31
DMD-228ENST00000541735 NELFBQ8WX92 580 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 HSPH1Q92598 858 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 HAUS1Q96CS2 278 aa6.89□□□□□ -1.31
DMD-228ENST00000541735 FARP1Q9Y4F1 1045 aaPredicted RBP6.89□□□□□ -1.31
DMD-228ENST00000541735 CLIC2O15247 247 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 COG7P83436 770 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 KRT25Q7Z3Z0 450 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 DIS3L2Q8IYB7 885 aaKnown RBP6.88□□□□□ -1.31
DMD-228ENST00000541735 C6orf203Q9P0P8 240 aaPredicted RBP6.88□□□□□ -1.31
DMD-228ENST00000541735 FANCAO15360 1455 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 LOC102724428A0A0B4J2F2 783 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 BRD1O95696 1058 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 F13A1P00488 732 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 SIK1P57059 783 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 CYP27A1Q02318 531 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 TMEM62Q0P6H9 643 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 THNSL1Q8IYQ7 743 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 ASIC4Q96FT7 647 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 CFAP36Q96G28 342 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 SLC52A2Q9HAB3 445 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 ASAP1Q9ULH1 1129 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 SYNRGQ9UMZ2 1314 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 ACTN4O43707 911 aaKnown RBP6.88□□□□□ -1.31
DMD-228ENST00000541735 USP14P54578 494 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 TAF1CQ15572 869 aaPredicted RBP6.88□□□□□ -1.31
DMD-228ENST00000541735 SLC9C1Q4G0N8 1177 aa6.88□□□□□ -1.31
DMD-228ENST00000541735 IP6K1Q92551 441 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms