RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 KIAA0355O15063 1070 aa16.43■□□□□ 0.22
SUDS3-203ENST00000541591 PCP11498 1178 aaKnown RBP16.43■□□□□ 0.22
SUDS3-203ENST00000541591 RPS6P62753 249 aaKnown RBP16.43■□□□□ 0.22
SUDS3-203ENST00000541591 FSCN1Q16658 493 aaKnown RBP16.43■□□□□ 0.22
SUDS3-203ENST00000541591 STAG2Q8N3U4 1231 aa16.43■□□□□ 0.22
SUDS3-203ENST00000541591 PCSK9Q8NBP7 692 aaKnown RBP16.43■□□□□ 0.22
SUDS3-203ENST00000541591 COPS5Q92905 334 aa16.43■□□□□ 0.22
SUDS3-203ENST00000541591 AP5M1Q9H0R1 490 aa16.43■□□□□ 0.22
SUDS3-203ENST00000541591 SENP2Q9HC62 589 aa16.43■□□□□ 0.22
SUDS3-203ENST00000541591 A0A0U1RQG5 324 aaPredicted RBP16.42■□□□□ 0.22
SUDS3-203ENST00000541591 CHMLP26374 656 aa16.42■□□□□ 0.22
SUDS3-203ENST00000541591 CHST3Q7LGC8 479 aa16.42■□□□□ 0.22
SUDS3-203ENST00000541591 ANKRD33Q7Z3H0 272 aa16.42■□□□□ 0.22
SUDS3-203ENST00000541591 DGKHQ86XP1 1220 aa16.42■□□□□ 0.22
SUDS3-203ENST00000541591 ADGRF4Q8IZF3 695 aa16.42■□□□□ 0.22
SUDS3-203ENST00000541591 MTMR10Q9NXD2 777 aa16.42■□□□□ 0.22
SUDS3-203ENST00000541591 UMODL1Q5DID0 1318 aa16.42■□□□□ 0.22
SUDS3-203ENST00000541591 TET1Q8NFU7 2136 aa16.42■□□□□ 0.22
SUDS3-203ENST00000541591 ARVCFO00192 962 aa16.41■□□□□ 0.22
SUDS3-203ENST00000541591 ACRP10323 421 aa16.41■□□□□ 0.22
SUDS3-203ENST00000541591 FPGSQ05932 587 aa16.41■□□□□ 0.22
SUDS3-203ENST00000541591 QRICH1Q2TAL8 776 aa16.41■□□□□ 0.22
SUDS3-203ENST00000541591 GPATCH4Q5T3I0 446 aaKnown RBP16.41■□□□□ 0.22
SUDS3-203ENST00000541591 FAM126BQ8IXS8 530 aa16.41■□□□□ 0.22
SUDS3-203ENST00000541591 RNPC3Q96LT9 517 aaKnown RBP16.41■□□□□ 0.22
SUDS3-203ENST00000541591 GUCD1Q96NT3 240 aa16.41■□□□□ 0.22
SUDS3-203ENST00000541591 UBAC1Q9BSL1 405 aa16.41■□□□□ 0.22
SUDS3-203ENST00000541591 KRT23Q9C075 422 aa16.41■□□□□ 0.22
SUDS3-203ENST00000541591 VTA1Q9NP79 307 aa16.41■□□□□ 0.22
SUDS3-203ENST00000541591 COL20A1Q9P218 1284 aa16.41■□□□□ 0.22
SUDS3-203ENST00000541591 ADD3Q9UEY8 706 aaKnown RBP16.41■□□□□ 0.22
SUDS3-203ENST00000541591 CTNNA3Q9UI47 895 aa16.41■□□□□ 0.22
SUDS3-203ENST00000541591 TBX21Q9UL17 535 aa16.41■□□□□ 0.22
SUDS3-203ENST00000541591 GRIN2DO15399 1336 aa16.41■□□□□ 0.22
SUDS3-203ENST00000541591 EYSQ5T1H1 3165 aa16.4■□□□□ 0.22
SUDS3-203ENST00000541591 MYL3P08590 195 aa16.4■□□□□ 0.22
SUDS3-203ENST00000541591 CYP21A2P08686 494 aa16.4■□□□□ 0.22
SUDS3-203ENST00000541591 PARP1P09874 1014 aaKnown RBP16.4■□□□□ 0.22
SUDS3-203ENST00000541591 CYP2C18P33260 490 aa16.4■□□□□ 0.22
SUDS3-203ENST00000541591 CDK7P50613 346 aa16.4■□□□□ 0.22
SUDS3-203ENST00000541591 PDE4DQ08499 809 aa16.4■□□□□ 0.22
SUDS3-203ENST00000541591 IFIT1BQ5T764 474 aaKnown RBP16.4■□□□□ 0.22
SUDS3-203ENST00000541591 STOX1Q6ZVD7 989 aa16.4■□□□□ 0.22
SUDS3-203ENST00000541591 OR6J1Q8NGC5 347 aa16.4■□□□□ 0.22
SUDS3-203ENST00000541591 WDR11Q9BZH6 1224 aa16.4■□□□□ 0.22
SUDS3-203ENST00000541591 ELP1O95163 1332 aa16.4■□□□□ 0.22
SUDS3-203ENST00000541591 WDR19Q8NEZ3 1342 aa16.4■□□□□ 0.22
SUDS3-203ENST00000541591 TIMP1P01033 207 aa16.39■□□□□ 0.21
SUDS3-203ENST00000541591 CHMP4BP1P59074 171 aa16.39■□□□□ 0.21
SUDS3-203ENST00000541591 SEC23AQ15436 765 aa16.39■□□□□ 0.21
SUDS3-203ENST00000541591 ASPRV1Q53RT3 343 aa16.39■□□□□ 0.21
SUDS3-203ENST00000541591 IQSEC1Q6DN90 963 aa16.39■□□□□ 0.21
SUDS3-203ENST00000541591 FAM109BQ6ICB4 259 aaPredicted RBP16.39■□□□□ 0.21
SUDS3-203ENST00000541591 MORC4Q8TE76 937 aa16.39■□□□□ 0.21
SUDS3-203ENST00000541591 TOX2Q96NM4 488 aa16.39■□□□□ 0.21
SUDS3-203ENST00000541591 TAAR1Q96RJ0 339 aa16.39■□□□□ 0.21
SUDS3-203ENST00000541591 TRPV6Q9H1D0 765 aa16.39■□□□□ 0.21
SUDS3-203ENST00000541591 JMJD4Q9H9V9 463 aa16.39■□□□□ 0.21
SUDS3-203ENST00000541591 CDH23Q9H251 3354 aa16.39■□□□□ 0.21
SUDS3-203ENST00000541591 RAD50Q92878 1312 aa16.39■□□□□ 0.21
SUDS3-203ENST00000541591 KAT6AQ92794 2004 aa16.38■□□□□ 0.21
SUDS3-203ENST00000541591 ARIH2O95376 493 aa16.38■□□□□ 0.21
SUDS3-203ENST00000541591 CSF2RAP15509 400 aa16.38■□□□□ 0.21
SUDS3-203ENST00000541591 ITGA7Q13683 1181 aa16.38■□□□□ 0.21
SUDS3-203ENST00000541591 SLC35G1Q2M3R5 365 aa16.38■□□□□ 0.21
SUDS3-203ENST00000541591 ZNF697Q5TEC3 545 aa16.38■□□□□ 0.21
SUDS3-203ENST00000541591 PIBF1Q8WXW3 757 aa16.38■□□□□ 0.21
SUDS3-203ENST00000541591 ANKS1AQ92625 1134 aa16.38■□□□□ 0.21
SUDS3-203ENST00000541591 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.38■□□□□ 0.21
SUDS3-203ENST00000541591 CNNM2Q9H8M5 875 aa16.38■□□□□ 0.21
SUDS3-203ENST00000541591 MROH7Q68CQ1 1323 aa16.38■□□□□ 0.21
SUDS3-203ENST00000541591 GRXCR1A8MXD5 290 aa16.37■□□□□ 0.21
SUDS3-203ENST00000541591 E7EWF7 191 aa16.37■□□□□ 0.21
SUDS3-203ENST00000541591 TLR3O15455 904 aaKnown RBP16.37■□□□□ 0.21
SUDS3-203ENST00000541591 SORBS3O60504 671 aa16.37■□□□□ 0.21
SUDS3-203ENST00000541591 B4GALT4O60513 344 aa16.37■□□□□ 0.21
SUDS3-203ENST00000541591 PPP1R11O60927 126 aaPredicted RBP16.37■□□□□ 0.21
SUDS3-203ENST00000541591 CCL23P55773 120 aa16.37■□□□□ 0.21
SUDS3-203ENST00000541591 COL9A3Q14050 684 aaPredicted RBP16.37■□□□□ 0.21
SUDS3-203ENST00000541591 DUSP28Q4G0W2 176 aa16.37■□□□□ 0.21
SUDS3-203ENST00000541591 CCDC178Q5BJE1 867 aa16.37■□□□□ 0.21
SUDS3-203ENST00000541591 GPR153Q6NV75 609 aa16.37■□□□□ 0.21
SUDS3-203ENST00000541591 SEPT14Q6ZU15 432 aa16.37■□□□□ 0.21
SUDS3-203ENST00000541591 HOMER1Q86YM7 354 aa16.37■□□□□ 0.21
SUDS3-203ENST00000541591 SLC17A8Q8NDX2 589 aa16.37■□□□□ 0.21
SUDS3-203ENST00000541591 ZFP91Q96JP5 570 aaPredicted RBP16.37■□□□□ 0.21
SUDS3-203ENST00000541591 MAD2L2Q9UI95 211 aa16.37■□□□□ 0.21
SUDS3-203ENST00000541591 ABCB11O95342 1321 aa16.37■□□□□ 0.21
SUDS3-203ENST00000541591 IFIT3O14879 490 aaKnown RBP16.36■□□□□ 0.21
SUDS3-203ENST00000541591 SGSM2O43147 1006 aa16.36■□□□□ 0.21
SUDS3-203ENST00000541591 CFBP00751 764 aa16.36■□□□□ 0.21
SUDS3-203ENST00000541591 CD4P01730 458 aa16.36■□□□□ 0.21
SUDS3-203ENST00000541591 EIF2AK2P19525 551 aaKnown RBP16.36■□□□□ 0.21
SUDS3-203ENST00000541591 NKX3-2P78367 333 aa16.36■□□□□ 0.21
SUDS3-203ENST00000541591 PPP2R5BQ15173 497 aa16.36■□□□□ 0.21
SUDS3-203ENST00000541591 MFSD5Q6N075 450 aa16.36■□□□□ 0.21
SUDS3-203ENST00000541591 C16orf59Q7L2K0 433 aa16.36■□□□□ 0.21
SUDS3-203ENST00000541591 FBXO11Q86XK2 927 aa16.36■□□□□ 0.21
SUDS3-203ENST00000541591 SYTL5Q8TDW5 730 aaPredicted RBP16.36■□□□□ 0.21
SUDS3-203ENST00000541591 RUFY2Q8WXA3 655 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms