RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 CCT2P78371 535 aaKnown RBP21.65■■□□□ 1.06
VPS33A-205ENST00000541169 SSRP1Q08945 709 aaKnown RBP21.65■■□□□ 1.06
VPS33A-205ENST00000541169 BAATQ14032 418 aaPredicted RBP21.65■■□□□ 1.06
VPS33A-205ENST00000541169 PFKFB3Q16875 520 aaPredicted RBP21.65■■□□□ 1.06
VPS33A-205ENST00000541169 NPLOC4Q8TAT6 608 aa21.65■■□□□ 1.06
VPS33A-205ENST00000541169 CUL5Q93034 780 aa21.65■■□□□ 1.06
VPS33A-205ENST00000541169 ZNF333Q96JL9 665 aa21.65■■□□□ 1.06
VPS33A-205ENST00000541169 GCOM1H8Y6P7 765 aaPredicted RBP21.64■■□□□ 1.05
VPS33A-205ENST00000541169 PIK3CDO00329 1044 aa21.64■■□□□ 1.05
VPS33A-205ENST00000541169 IGHA2P01877 340 aa21.64■■□□□ 1.05
VPS33A-205ENST00000541169 POLR2MP0CAP2 368 aa21.64■■□□□ 1.05
VPS33A-205ENST00000541169 SCG2P13521 617 aa21.64■■□□□ 1.05
VPS33A-205ENST00000541169 ELNP15502 786 aa21.64■■□□□ 1.05
VPS33A-205ENST00000541169 HSD17B4P51659 736 aa21.64■■□□□ 1.05
VPS33A-205ENST00000541169 RPS6P62753 249 aaKnown RBP21.64■■□□□ 1.05
VPS33A-205ENST00000541169 ABHD8Q96I13 439 aa21.64■■□□□ 1.05
VPS33A-205ENST00000541169 TINF2Q9BSI4 451 aa21.64■■□□□ 1.05
VPS33A-205ENST00000541169 RPTORQ8N122 1335 aa21.63■■□□□ 1.05
VPS33A-205ENST00000541169 INHAP05111 366 aa21.63■■□□□ 1.05
VPS33A-205ENST00000541169 STK3Q13188 491 aa21.63■■□□□ 1.05
VPS33A-205ENST00000541169 MAP3K21Q5TCX8 1036 aa21.63■■□□□ 1.05
VPS33A-205ENST00000541169 MCTP2Q6DN12 878 aa21.63■■□□□ 1.05
VPS33A-205ENST00000541169 HEATR3Q7Z4Q2 680 aa21.63■■□□□ 1.05
VPS33A-205ENST00000541169 PIBF1Q8WXW3 757 aa21.63■■□□□ 1.05
VPS33A-205ENST00000541169 WASF1Q92558 559 aa21.63■■□□□ 1.05
VPS33A-205ENST00000541169 GTF3C6Q969F1 213 aa21.63■■□□□ 1.05
VPS33A-205ENST00000541169 NCOA5Q9HCD5 579 aaKnown RBP21.63■■□□□ 1.05
VPS33A-205ENST00000541169 SH3GLB2Q9NR46 395 aa21.63■■□□□ 1.05
VPS33A-205ENST00000541169 BARHL2Q9NY43 387 aa21.63■■□□□ 1.05
VPS33A-205ENST00000541169 CNPY2Q9Y2B0 182 aa21.63■■□□□ 1.05
VPS33A-205ENST00000541169 SMCHD1A6NHR9 2005 aa21.63■■□□□ 1.05
VPS33A-205ENST00000541169 STK36Q9NRP7 1315 aa21.62■■□□□ 1.05
VPS33A-205ENST00000541169 MSCO60682 206 aa21.62■■□□□ 1.05
VPS33A-205ENST00000541169 DEXIO95424 95 aa21.62■■□□□ 1.05
VPS33A-205ENST00000541169 CFBP00751 764 aa21.62■■□□□ 1.05
VPS33A-205ENST00000541169 CALML3P27482 149 aa21.62■■□□□ 1.05
VPS33A-205ENST00000541169 SCRN1Q12765 414 aa21.62■■□□□ 1.05
VPS33A-205ENST00000541169 ME3Q16798 604 aa21.62■■□□□ 1.05
VPS33A-205ENST00000541169 CCDC148Q8NFR7 591 aa21.62■■□□□ 1.05
VPS33A-205ENST00000541169 NSUN6Q8TEA1 469 aaKnown RBP21.62■■□□□ 1.05
VPS33A-205ENST00000541169 SH3TC2Q8TF17 1288 aa21.62■■□□□ 1.05
VPS33A-205ENST00000541169 IWS1Q96ST2 819 aa21.62■■□□□ 1.05
VPS33A-205ENST00000541169 PSTPIP2Q9H939 334 aa21.62■■□□□ 1.05
VPS33A-205ENST00000541169 HMX1Q9NP08 348 aaPredicted RBP21.62■■□□□ 1.05
VPS33A-205ENST00000541169 XBP1P17861 261 aa21.61■■□□□ 1.05
VPS33A-205ENST00000541169 CCL14Q16627 93 aa21.61■■□□□ 1.05
VPS33A-205ENST00000541169 LARP6Q9BRS8 491 aaKnown RBP21.61■■□□□ 1.05
VPS33A-205ENST00000541169 LLPHQ9BRT6 129 aaKnown RBP21.61■■□□□ 1.05
VPS33A-205ENST00000541169 TMEM106CQ9BVX2 250 aa21.61■■□□□ 1.05
VPS33A-205ENST00000541169 SLC26A6Q9BXS9 759 aa21.61■■□□□ 1.05
VPS33A-205ENST00000541169 ABHD16BQ9H3Z7 469 aa21.61■■□□□ 1.05
VPS33A-205ENST00000541169 ESYT2A0FGR8 921 aa21.6■■□□□ 1.05
VPS33A-205ENST00000541169 PRKAR2AP13861 404 aaKnown RBP21.6■■□□□ 1.05
VPS33A-205ENST00000541169 GNA11P29992 359 aa21.6■■□□□ 1.05
VPS33A-205ENST00000541169 NAPAP54920 295 aa21.6■■□□□ 1.05
VPS33A-205ENST00000541169 CNTN2Q02246 1040 aa21.6■■□□□ 1.05
VPS33A-205ENST00000541169 WWC2Q6AWC2 1192 aa21.6■■□□□ 1.05
VPS33A-205ENST00000541169 MORC4Q8TE76 937 aa21.6■■□□□ 1.05
VPS33A-205ENST00000541169 OPLAHO14841 1288 aa21.59■■□□□ 1.05
VPS33A-205ENST00000541169 ALDH5A1P51649 535 aaPredicted RBP21.59■■□□□ 1.05
VPS33A-205ENST00000541169 CACNB2Q08289 660 aaPredicted RBP21.59■■□□□ 1.05
VPS33A-205ENST00000541169 SLC30A10Q6XR72 485 aa21.59■■□□□ 1.05
VPS33A-205ENST00000541169 SMARCC2Q8TAQ2 1214 aa21.59■■□□□ 1.05
VPS33A-205ENST00000541169 BICD2Q8TD16 824 aa21.59■■□□□ 1.05
VPS33A-205ENST00000541169 SYTL5Q8TDW5 730 aaPredicted RBP21.59■■□□□ 1.05
VPS33A-205ENST00000541169 PHKBQ93100 1093 aa21.59■■□□□ 1.05
VPS33A-205ENST00000541169 EHMT1Q9H9B1 1298 aa21.59■■□□□ 1.05
VPS33A-205ENST00000541169 FLRT1Q9NZU1 646 aa21.59■■□□□ 1.05
VPS33A-205ENST00000541169 SOWAHBA6NEL2 793 aa21.58■■□□□ 1.05
VPS33A-205ENST00000541169 STXBP3O00186 592 aa21.58■■□□□ 1.05
VPS33A-205ENST00000541169 FOSP01100 380 aaPredicted RBP21.58■■□□□ 1.05
VPS33A-205ENST00000541169 ADCY7P51828 1080 aa21.58■■□□□ 1.05
VPS33A-205ENST00000541169 PKN1Q16512 942 aa21.58■■□□□ 1.05
VPS33A-205ENST00000541169 GALNT17Q6IS24 598 aa21.58■■□□□ 1.05
VPS33A-205ENST00000541169 NOL8Q76FK4 1167 aaKnown RBP21.58■■□□□ 1.05
VPS33A-205ENST00000541169 ARMCX2Q7L311 632 aa21.58■■□□□ 1.05
VPS33A-205ENST00000541169 RMDN3Q96TC7 470 aa21.58■■□□□ 1.05
VPS33A-205ENST00000541169 RNF208Q9H0X6 261 aa21.58■■□□□ 1.05
VPS33A-205ENST00000541169 C6orf50Q9HD87 102 aa21.58■■□□□ 1.05
VPS33A-205ENST00000541169 RIC8AQ9NPQ8 531 aa21.58■■□□□ 1.05
VPS33A-205ENST00000541169 hCG_1642624A0A1W2PR95 340 aa21.57■■□□□ 1.04
VPS33A-205ENST00000541169 CYBAP13498 195 aa21.57■■□□□ 1.04
VPS33A-205ENST00000541169 CCL5P13501 91 aa21.57■■□□□ 1.04
VPS33A-205ENST00000541169 CYP2C19P33261 490 aa21.57■■□□□ 1.04
VPS33A-205ENST00000541169 ARHGEF16Q5VV41 709 aa21.57■■□□□ 1.04
VPS33A-205ENST00000541169 XRRA1Q6P2D8 792 aa21.57■■□□□ 1.04
VPS33A-205ENST00000541169 GPKOWQ92917 476 aaPredicted RBP eCLIP21.57■■□□□ 1.04
VPS33A-205ENST00000541169 FGD4Q96M96 766 aa21.57■■□□□ 1.04
VPS33A-205ENST00000541169 ZMYND12Q9H0C1 365 aa21.57■■□□□ 1.04
VPS33A-205ENST00000541169 VTA1Q9NP79 307 aa21.57■■□□□ 1.04
VPS33A-205ENST00000541169 PAK6Q9NQU5 681 aaPredicted RBP21.57■■□□□ 1.04
VPS33A-205ENST00000541169 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.57■■□□□ 1.04
VPS33A-205ENST00000541169 SMCO2A6NFE2 343 aa21.56■■□□□ 1.04
VPS33A-205ENST00000541169 STAM2O75886 525 aa21.56■■□□□ 1.04
VPS33A-205ENST00000541169 GJB1P08034 283 aa21.56■■□□□ 1.04
VPS33A-205ENST00000541169 TAL1P17542 331 aaPredicted RBP21.56■■□□□ 1.04
VPS33A-205ENST00000541169 EDNRBP24530 442 aa21.56■■□□□ 1.04
VPS33A-205ENST00000541169 HMGN5P82970 282 aaKnown RBP21.56■■□□□ 1.04
VPS33A-205ENST00000541169 PDE4DQ08499 809 aa21.56■■□□□ 1.04
VPS33A-205ENST00000541169 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms