RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 ANKRD65E5RJM6 399 aa10.99□□□□□ -0.65
PHC1-208ENST00000540574 SORBS3O60504 671 aa10.99□□□□□ -0.65
PHC1-208ENST00000540574 PMS1P54277 932 aaKnown RBP10.99□□□□□ -0.65
PHC1-208ENST00000540574 POLR2FP61218 127 aaKnown RBP10.99□□□□□ -0.65
PHC1-208ENST00000540574 RASSF7Q02833 373 aa10.99□□□□□ -0.65
PHC1-208ENST00000540574 LLGL1Q15334 1064 aa10.99□□□□□ -0.65
PHC1-208ENST00000540574 ODF2Q5BJF6 829 aa10.99□□□□□ -0.65
PHC1-208ENST00000540574 SLC30A10Q6XR72 485 aa10.99□□□□□ -0.65
PHC1-208ENST00000540574 SRGAP1Q7Z6B7 1085 aa10.99□□□□□ -0.65
PHC1-208ENST00000540574 CCDC155Q8N6L0 562 aa10.99□□□□□ -0.65
PHC1-208ENST00000540574 TEKT1Q969V4 418 aa10.99□□□□□ -0.65
PHC1-208ENST00000540574 E9PMD0 336 aa10.99□□□□□ -0.65
PHC1-208ENST00000540574 ORC4O43929 436 aa10.99□□□□□ -0.65
PHC1-208ENST00000540574 APBA3O96018 575 aa10.99□□□□□ -0.65
PHC1-208ENST00000540574 ZSCAN20P17040 1043 aaPredicted RBP10.99□□□□□ -0.65
PHC1-208ENST00000540574 STAT3P40763 770 aa10.99□□□□□ -0.65
PHC1-208ENST00000540574 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.99□□□□□ -0.65
PHC1-208ENST00000540574 SPATA31A5Q5VU36 1347 aa10.99□□□□□ -0.65
PHC1-208ENST00000540574 SPATA31A7Q8IWB4 1347 aa10.99□□□□□ -0.65
PHC1-208ENST00000540574 PCP11498 1178 aaKnown RBP10.99□□□□□ -0.65
PHC1-208ENST00000540574 IBSPP21815 317 aaPredicted RBP10.99□□□□□ -0.65
PHC1-208ENST00000540574 SLC7A5Q01650 507 aa10.99□□□□□ -0.65
PHC1-208ENST00000540574 UTP14CQ5TAP6 766 aaKnown RBP10.99□□□□□ -0.65
PHC1-208ENST00000540574 ANKRD40Q6AI12 368 aa10.99□□□□□ -0.65
PHC1-208ENST00000540574 TTC19Q6DKK2 380 aaPredicted RBP10.99□□□□□ -0.65
PHC1-208ENST00000540574 TPH2Q8IWU9 490 aa10.99□□□□□ -0.65
PHC1-208ENST00000540574 MB21D1Q8N884 522 aa10.99□□□□□ -0.65
PHC1-208ENST00000540574 ZNF384Q8TF68 577 aa10.99□□□□□ -0.65
PHC1-208ENST00000540574 KIFC2Q96AC6 838 aa10.99□□□□□ -0.65
PHC1-208ENST00000540574 BARHL2Q9NY43 387 aa10.99□□□□□ -0.65
PHC1-208ENST00000540574 BCS1LQ9Y276 419 aa10.99□□□□□ -0.65
PHC1-208ENST00000540574 CLIC2O15247 247 aa10.98□□□□□ -0.65
PHC1-208ENST00000540574 CERKLQ49MI3 558 aaPredicted RBP10.98□□□□□ -0.65
PHC1-208ENST00000540574 NAA15Q9BXJ9 866 aaKnown RBP10.98□□□□□ -0.65
PHC1-208ENST00000540574 PPEF1O14829 653 aaPredicted RBP10.98□□□□□ -0.65
PHC1-208ENST00000540574 C2orf54Q08AI8 447 aa10.98□□□□□ -0.65
PHC1-208ENST00000540574 SLFN13Q68D06 897 aa10.98□□□□□ -0.65
PHC1-208ENST00000540574 ADAT2Q7Z6V5 191 aaKnown RBP10.98□□□□□ -0.65
PHC1-208ENST00000540574 KLHL7Q8IXQ5 586 aa10.98□□□□□ -0.65
PHC1-208ENST00000540574 LSM14BQ9BX40 385 aaKnown RBP10.98□□□□□ -0.65
PHC1-208ENST00000540574 QTRT2Q9H974 415 aaKnown RBP10.98□□□□□ -0.65
PHC1-208ENST00000540574 ABCB6Q9NP58 842 aa10.98□□□□□ -0.65
PHC1-208ENST00000540574 PANK4Q9NVE7 773 aa10.98□□□□□ -0.65
PHC1-208ENST00000540574 MRC1P22897 1456 aa10.98□□□□□ -0.65
PHC1-208ENST00000540574 DCCP43146 1447 aa10.98□□□□□ -0.65
PHC1-208ENST00000540574 NPHP3-ACAD11A0A0J9YXS1 232 aa10.98□□□□□ -0.65
PHC1-208ENST00000540574 TMEM110-MUSTN1A8MSY1 372 aa10.98□□□□□ -0.65
PHC1-208ENST00000540574 ZNF185O15231 689 aa10.98□□□□□ -0.65
PHC1-208ENST00000540574 CYTH3O43739 400 aa10.98□□□□□ -0.65
PHC1-208ENST00000540574 TADA3O75528 432 aa10.98□□□□□ -0.65
PHC1-208ENST00000540574 GCNT3O95395 438 aa10.98□□□□□ -0.65
PHC1-208ENST00000540574 MOCS3O95396 460 aa10.98□□□□□ -0.65
PHC1-208ENST00000540574 HDXQ7Z353 690 aa10.98□□□□□ -0.65
PHC1-208ENST00000540574 TMC4Q7Z404 712 aa10.98□□□□□ -0.65
PHC1-208ENST00000540574 CCDC65Q8IXS2 484 aa10.98□□□□□ -0.65
PHC1-208ENST00000540574 DDX12PQ92771 950 aa10.98□□□□□ -0.65
PHC1-208ENST00000540574 TRIM31Q9BZY9 425 aa10.98□□□□□ -0.65
PHC1-208ENST00000540574 NHEJ1Q9H9Q4 299 aaPredicted RBP10.98□□□□□ -0.65
PHC1-208ENST00000540574 SMARCAL1Q9NZC9 954 aa10.98□□□□□ -0.65
PHC1-208ENST00000540574 DUSP10Q9Y6W6 482 aa10.98□□□□□ -0.65
PHC1-208ENST00000540574 MDM2Q00987 491 aaPredicted RBP10.97□□□□□ -0.65
PHC1-208ENST00000540574 GRM4Q14833 912 aa10.97□□□□□ -0.65
PHC1-208ENST00000540574 MAP9Q49MG5 647 aa10.97□□□□□ -0.65
PHC1-208ENST00000540574 FAM26FQ5R3K3 315 aa10.97□□□□□ -0.65
PHC1-208ENST00000540574 MAATS1Q7Z4T9 603 aa10.97□□□□□ -0.65
PHC1-208ENST00000540574 AMIGO3Q86WK7 504 aa10.97□□□□□ -0.65
PHC1-208ENST00000540574 MYOCDQ8IZQ8 938 aa10.97□□□□□ -0.65
PHC1-208ENST00000540574 TBC1D22AQ8WUA7 517 aa10.97□□□□□ -0.65
PHC1-208ENST00000540574 PANX2Q96RD6 677 aa10.97□□□□□ -0.65
PHC1-208ENST00000540574 GOPCQ9HD26 462 aa10.97□□□□□ -0.65
PHC1-208ENST00000540574 MAD2L2Q9UI95 211 aa10.97□□□□□ -0.65
PHC1-208ENST00000540574 FLT1P17948 1338 aa10.97□□□□□ -0.65
PHC1-208ENST00000540574 ICA1Q05084 483 aa10.97□□□□□ -0.65
PHC1-208ENST00000540574 TRIM14Q14142 442 aa10.97□□□□□ -0.65
PHC1-208ENST00000540574 IQCEQ6IPM2 695 aa10.97□□□□□ -0.65
PHC1-208ENST00000540574 RCSD1Q6JBY9 416 aa10.97□□□□□ -0.65
PHC1-208ENST00000540574 SND1Q7KZF4 910 aaKnown RBP eCLIP10.97□□□□□ -0.65
PHC1-208ENST00000540574 SH2D3AQ9BRG2 576 aa10.97□□□□□ -0.65
PHC1-208ENST00000540574 HSD3B7Q9H2F3 369 aa10.97□□□□□ -0.65
PHC1-208ENST00000540574 MLXIPQ9HAP2 919 aa10.97□□□□□ -0.65
PHC1-208ENST00000540574 POTEB3A0JP26 581 aa10.97□□□□□ -0.65
PHC1-208ENST00000540574 POTECB2RU33 542 aa10.97□□□□□ -0.65
PHC1-208ENST00000540574 ZEB2O60315 1214 aa10.97□□□□□ -0.65
PHC1-208ENST00000540574 ECM2O94769 699 aaPredicted RBP10.97□□□□□ -0.65
PHC1-208ENST00000540574 PLEKP08567 350 aaPredicted RBP10.97□□□□□ -0.65
PHC1-208ENST00000540574 CCNE1P24864 410 aa10.97□□□□□ -0.65
PHC1-208ENST00000540574 EIF4A3P38919 411 aaKnown RBP10.97□□□□□ -0.65
PHC1-208ENST00000540574 TRIM65Q6PJ69 517 aa10.97□□□□□ -0.65
PHC1-208ENST00000540574 POTEBQ6S5H4 581 aa10.97□□□□□ -0.65
PHC1-208ENST00000540574 MIGA2Q7L4E1 593 aa10.97□□□□□ -0.65
PHC1-208ENST00000540574 C10orf67Q8IYJ2 551 aa10.97□□□□□ -0.65
PHC1-208ENST00000540574 CWC15Q9P013 229 aaKnown RBP10.97□□□□□ -0.65
PHC1-208ENST00000540574 TTLL1O95922 423 aa10.96□□□□□ -0.65
PHC1-208ENST00000540574 SSR1P43307 286 aaKnown RBP10.96□□□□□ -0.65
PHC1-208ENST00000540574 ERVK-24P63145 666 aa10.96□□□□□ -0.65
PHC1-208ENST00000540574 ARL6IP4Q66PJ3 421 aaKnown RBP10.96□□□□□ -0.65
PHC1-208ENST00000540574 EHBP1Q8NDI1 1231 aa10.96□□□□□ -0.65
PHC1-208ENST00000540574 LZTS2Q9BRK4 669 aa10.96□□□□□ -0.65
PHC1-208ENST00000540574 ANAPC4Q9UJX5 808 aa10.96□□□□□ -0.65
PHC1-208ENST00000540574 STXBP3O00186 592 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms