RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 LBX2Q6XYB7 198 aa18.42■□□□□ 0.54
TRAF3-204ENST00000539721 NEK8Q86SG6 692 aa18.42■□□□□ 0.54
TRAF3-204ENST00000539721 MCF2L2Q86YR7 1114 aa18.42■□□□□ 0.54
TRAF3-204ENST00000539721 BRI3BPQ8WY22 251 aa18.42■□□□□ 0.54
TRAF3-204ENST00000539721 TRERF1Q96PN7 1200 aa18.42■□□□□ 0.54
TRAF3-204ENST00000539721 TEX13BQ9BXU2 312 aa18.42■□□□□ 0.54
TRAF3-204ENST00000539721 ANO3Q9BYT9 981 aa18.42■□□□□ 0.54
TRAF3-204ENST00000539721 PNMA3Q9UL41 463 aa18.42■□□□□ 0.54
TRAF3-204ENST00000539721 FOSP01100 380 aaPredicted RBP18.42■□□□□ 0.54
TRAF3-204ENST00000539721 MUM1L1Q5H9M0 696 aa18.42■□□□□ 0.54
TRAF3-204ENST00000539721 CLEC4DQ8WXI8 215 aa18.42■□□□□ 0.54
TRAF3-204ENST00000539721 TBC1D5Q92609 795 aa18.42■□□□□ 0.54
TRAF3-204ENST00000539721 RNF146Q9NTX7 359 aa18.42■□□□□ 0.54
TRAF3-204ENST00000539721 ABT1Q9ULW3 272 aaKnown RBP18.42■□□□□ 0.54
TRAF3-204ENST00000539721 NFIBO00712 420 aa18.41■□□□□ 0.54
TRAF3-204ENST00000539721 BMP15O95972 392 aa18.41■□□□□ 0.54
TRAF3-204ENST00000539721 MCM7P33993 719 aa18.41■□□□□ 0.54
TRAF3-204ENST00000539721 STAT3P40763 770 aa18.41■□□□□ 0.54
TRAF3-204ENST00000539721 SKOR2Q2VWA4 1001 aaPredicted RBP18.41■□□□□ 0.54
TRAF3-204ENST00000539721 LETM2Q2VYF4 491 aa18.41■□□□□ 0.54
TRAF3-204ENST00000539721 ANKRD23Q86SG2 305 aa18.41■□□□□ 0.54
TRAF3-204ENST00000539721 JMYQ8N9B5 988 aa18.41■□□□□ 0.54
TRAF3-204ENST00000539721 SLC45A1Q9Y2W3 748 aa18.41■□□□□ 0.54
TRAF3-204ENST00000539721 RIPK3Q9Y572 518 aa18.41■□□□□ 0.54
TRAF3-204ENST00000539721 DDX49Q9Y6V7 483 aaKnown RBP18.41■□□□□ 0.54
TRAF3-204ENST00000539721 TMEM88BA6NKF7 163 aa18.4■□□□□ 0.54
TRAF3-204ENST00000539721 BTBD19C9JJ37 291 aa18.4■□□□□ 0.54
TRAF3-204ENST00000539721 PDHXO00330 501 aa18.4■□□□□ 0.54
TRAF3-204ENST00000539721 TRAK2O60296 914 aa18.4■□□□□ 0.54
TRAF3-204ENST00000539721 PPP6R2O75170 966 aa18.4■□□□□ 0.54
TRAF3-204ENST00000539721 MARCKSP29966 332 aaPredicted RBP18.4■□□□□ 0.54
TRAF3-204ENST00000539721 FSTL1Q12841 308 aa18.4■□□□□ 0.54
TRAF3-204ENST00000539721 TKFCQ3LXA3 575 aa18.4■□□□□ 0.54
TRAF3-204ENST00000539721 FCHSD1Q86WN1 690 aa18.4■□□□□ 0.54
TRAF3-204ENST00000539721 ZNF784Q8NCA9 323 aaPredicted RBP18.4■□□□□ 0.54
TRAF3-204ENST00000539721 PAGR1Q9BTK6 254 aa18.4■□□□□ 0.54
TRAF3-204ENST00000539721 BTBD7Q9P203 1132 aa18.4■□□□□ 0.54
TRAF3-204ENST00000539721 CCNT1O60563 726 aaKnown RBP18.4■□□□□ 0.54
TRAF3-204ENST00000539721 MBD3O95983 291 aa18.4■□□□□ 0.54
TRAF3-204ENST00000539721 HSD17B4P51659 736 aa18.4■□□□□ 0.54
TRAF3-204ENST00000539721 POTEEQ6S8J3 1075 aa18.4■□□□□ 0.54
TRAF3-204ENST00000539721 PCDHA7Q9UN72 937 aa18.4■□□□□ 0.54
TRAF3-204ENST00000539721 SLC10A3P09131 477 aa18.39■□□□□ 0.53
TRAF3-204ENST00000539721 SAMD3Q8N6K7 520 aa18.39■□□□□ 0.53
TRAF3-204ENST00000539721 GPT2Q8TD30 523 aa18.39■□□□□ 0.53
TRAF3-204ENST00000539721 MANSC4A6NHS7 340 aaPredicted RBP18.38■□□□□ 0.53
TRAF3-204ENST00000539721 PEX10O60683 326 aa18.38■□□□□ 0.53
TRAF3-204ENST00000539721 CNMDO75829 334 aa18.38■□□□□ 0.53
TRAF3-204ENST00000539721 CYP2C8P10632 490 aa18.38■□□□□ 0.53
TRAF3-204ENST00000539721 GHRHRQ02643 423 aa18.38■□□□□ 0.53
TRAF3-204ENST00000539721 PTGDRQ13258 359 aa18.38■□□□□ 0.53
TRAF3-204ENST00000539721 NSMFQ6X4W1 530 aa18.38■□□□□ 0.53
TRAF3-204ENST00000539721 FAM43AQ8N2R8 423 aa18.38■□□□□ 0.53
TRAF3-204ENST00000539721 GTF3C2Q8WUA4 911 aaPredicted RBP18.38■□□□□ 0.53
TRAF3-204ENST00000539721 SPATC1LQ9H0A9 340 aa18.38■□□□□ 0.53
TRAF3-204ENST00000539721 ACAD9Q9H845 621 aa18.38■□□□□ 0.53
TRAF3-204ENST00000539721 EHMT1Q9H9B1 1298 aa18.38■□□□□ 0.53
TRAF3-204ENST00000539721 MAP3K20Q9NYL2 800 aaKnown RBP18.38■□□□□ 0.53
TRAF3-204ENST00000539721 ATP2C1P98194 919 aaPredicted RBP18.37■□□□□ 0.53
TRAF3-204ENST00000539721 ORC2Q13416 577 aaPredicted RBP18.37■□□□□ 0.53
TRAF3-204ENST00000539721 RNF207Q6ZRF8 634 aa18.37■□□□□ 0.53
TRAF3-204ENST00000539721 RIOX2Q8IUF8 465 aa18.37■□□□□ 0.53
TRAF3-204ENST00000539721 KRI1Q8N9T8 703 aaKnown RBP18.37■□□□□ 0.53
TRAF3-204ENST00000539721 SMCR8Q8TEV9 937 aaPredicted RBP18.37■□□□□ 0.53
TRAF3-204ENST00000539721 NAP1L4Q99733 375 aaKnown RBP18.37■□□□□ 0.53
TRAF3-204ENST00000539721 RABGAP1Q9Y3P9 1069 aa18.37■□□□□ 0.53
TRAF3-204ENST00000539721 MRVI1Q9Y6F6 885 aa18.37■□□□□ 0.53
TRAF3-204ENST00000539721 MORC2Q9Y6X9 1032 aaPredicted RBP18.37■□□□□ 0.53
TRAF3-204ENST00000539721 TESPA1A2RU30 521 aaPredicted RBP18.37■□□□□ 0.53
TRAF3-204ENST00000539721 SREBF1P36956 1147 aa18.37■□□□□ 0.53
TRAF3-204ENST00000539721 ARHGAP4P98171 946 aa18.37■□□□□ 0.53
TRAF3-204ENST00000539721 KLHL40Q2TBA0 621 aa18.37■□□□□ 0.53
TRAF3-204ENST00000539721 ADALQ6DHV7 355 aa18.37■□□□□ 0.53
TRAF3-204ENST00000539721 CHST13Q8NET6 341 aa18.37■□□□□ 0.53
TRAF3-204ENST00000539721 CCDC102AQ96A19 550 aa18.37■□□□□ 0.53
TRAF3-204ENST00000539721 PTPN18Q99952 460 aa18.37■□□□□ 0.53
TRAF3-204ENST00000539721 RBPJLQ9UBG7 517 aa18.37■□□□□ 0.53
TRAF3-204ENST00000539721 NEMFO60524 1076 aa18.36■□□□□ 0.53
TRAF3-204ENST00000539721 CUTAO60888 179 aa18.36■□□□□ 0.53
TRAF3-204ENST00000539721 TDP2O95551 362 aa18.36■□□□□ 0.53
TRAF3-204ENST00000539721 USP11P51784 963 aa18.36■□□□□ 0.53
TRAF3-204ENST00000539721 RPS6P62753 249 aaKnown RBP18.36■□□□□ 0.53
TRAF3-204ENST00000539721 SLC30A10Q6XR72 485 aa18.36■□□□□ 0.53
TRAF3-204ENST00000539721 HHIPL1Q96JK4 782 aa18.36■□□□□ 0.53
TRAF3-204ENST00000539721 TXNRD2Q9NNW7 524 aa18.36■□□□□ 0.53
TRAF3-204ENST00000539721 FBXO2Q9UK22 296 aaPredicted RBP18.36■□□□□ 0.53
TRAF3-204ENST00000539721 EDIL3O43854 480 aa18.35■□□□□ 0.53
TRAF3-204ENST00000539721 GCFC2P16383 781 aaKnown RBP18.35■□□□□ 0.53
TRAF3-204ENST00000539721 PTPREP23469 700 aa18.35■□□□□ 0.53
TRAF3-204ENST00000539721 AXDND1Q5T1B0 1012 aaPredicted RBP18.35■□□□□ 0.53
TRAF3-204ENST00000539721 PAXIP1Q6ZW49 1069 aaPredicted RBP18.35■□□□□ 0.53
TRAF3-204ENST00000539721 NCAPG2Q86XI2 1143 aa18.35■□□□□ 0.53
TRAF3-204ENST00000539721 C4orf32Q8N8J7 132 aa18.35■□□□□ 0.53
TRAF3-204ENST00000539721 SYTL5Q8TDW5 730 aaPredicted RBP18.35■□□□□ 0.53
TRAF3-204ENST00000539721 CRYGNQ8WXF5 182 aa18.35■□□□□ 0.53
TRAF3-204ENST00000539721 CLIC6Q96NY7 704 aa18.35■□□□□ 0.53
TRAF3-204ENST00000539721 PARK7Q99497 189 aaKnown RBP18.35■□□□□ 0.53
TRAF3-204ENST00000539721 MOV10L1Q9BXT6 1211 aaKnown RBP18.35■□□□□ 0.53
TRAF3-204ENST00000539721 COL20A1Q9P218 1284 aa18.35■□□□□ 0.53
TRAF3-204ENST00000539721 FBXO40Q9UH90 709 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms