RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 CCDC144BQ3MJ40 725 aa12.44□□□□□ -0.42
HMGA2-209ENST00000539662 TAPT1Q6NXT6 567 aa12.44□□□□□ -0.42
HMGA2-209ENST00000539662 BLOC1S2Q6QNY1 142 aa12.44□□□□□ -0.42
HMGA2-209ENST00000539662 TMTC3Q6ZXV5 915 aa12.44□□□□□ -0.42
HMGA2-209ENST00000539662 FBXO16Q8IX29 292 aaPredicted RBP12.44□□□□□ -0.42
HMGA2-209ENST00000539662 MSL3Q8N5Y2 521 aaKnown RBP12.44□□□□□ -0.42
HMGA2-209ENST00000539662 FANCBQ8NB91 859 aa12.44□□□□□ -0.42
HMGA2-209ENST00000539662 CTCFLQ8NI51 663 aaPredicted RBP12.44□□□□□ -0.42
HMGA2-209ENST00000539662 SYTL5Q8TDW5 730 aaPredicted RBP12.44□□□□□ -0.42
HMGA2-209ENST00000539662 BRF1Q92994 677 aa12.44□□□□□ -0.42
HMGA2-209ENST00000539662 AMNQ9BXJ7 453 aa12.44□□□□□ -0.42
HMGA2-209ENST00000539662 UPF3BQ9BZI7 483 aaKnown RBP12.44□□□□□ -0.42
HMGA2-209ENST00000539662 PCDHA1Q9Y5I3 950 aa12.44□□□□□ -0.42
HMGA2-209ENST00000539662 CEP290O15078 2479 aa12.43□□□□□ -0.42
HMGA2-209ENST00000539662 PNMA6FA0A0J9YX94 578 aa12.43□□□□□ -0.42
HMGA2-209ENST00000539662 PPFIA3O75145 1194 aa12.43□□□□□ -0.42
HMGA2-209ENST00000539662 HOXA13P31271 388 aaPredicted RBP12.43□□□□□ -0.42
HMGA2-209ENST00000539662 ADCYAP1R1P41586 468 aa12.43□□□□□ -0.42
HMGA2-209ENST00000539662 FUT2Q10981 343 aa12.43□□□□□ -0.42
HMGA2-209ENST00000539662 TMTC2Q8N394 836 aa12.43□□□□□ -0.42
HMGA2-209ENST00000539662 ANKLE1Q8NAG6 615 aa12.43□□□□□ -0.42
HMGA2-209ENST00000539662 MORC4Q8TE76 937 aa12.43□□□□□ -0.42
HMGA2-209ENST00000539662 ZFP91Q96JP5 570 aaPredicted RBP12.43□□□□□ -0.42
HMGA2-209ENST00000539662 MAP3K14Q99558 947 aa12.43□□□□□ -0.42
HMGA2-209ENST00000539662 SPZ1Q9BXG8 430 aa12.43□□□□□ -0.42
HMGA2-209ENST00000539662 ZSWIM6Q9HCJ5 1215 aa12.43□□□□□ -0.42
HMGA2-209ENST00000539662 CNPY2Q9Y2B0 182 aa12.43□□□□□ -0.42
HMGA2-209ENST00000539662 SYNRGQ9UMZ2 1314 aa12.42□□□□□ -0.42
HMGA2-209ENST00000539662 CTAGE5O15320 804 aa12.42□□□□□ -0.42
HMGA2-209ENST00000539662 DTNBO60941 627 aa12.42□□□□□ -0.42
HMGA2-209ENST00000539662 ADAMTS4O75173 837 aa12.42□□□□□ -0.42
HMGA2-209ENST00000539662 CFBP00751 764 aa12.42□□□□□ -0.42
HMGA2-209ENST00000539662 AKR1A1P14550 325 aa12.42□□□□□ -0.42
HMGA2-209ENST00000539662 SMPD1P17405 629 aa12.42□□□□□ -0.42
HMGA2-209ENST00000539662 ADD1P35611 737 aaKnown RBP12.42□□□□□ -0.42
HMGA2-209ENST00000539662 TOB2Q14106 344 aaPredicted RBP12.42□□□□□ -0.42
HMGA2-209ENST00000539662 LRRC41Q15345 812 aa12.42□□□□□ -0.42
HMGA2-209ENST00000539662 C8orf34Q49A92 452 aa12.42□□□□□ -0.42
HMGA2-209ENST00000539662 NECAB2Q7Z6G3 386 aa12.42□□□□□ -0.42
HMGA2-209ENST00000539662 RGS22Q8NE09 1264 aa12.42□□□□□ -0.42
HMGA2-209ENST00000539662 ABHD16BQ9H3Z7 469 aa12.42□□□□□ -0.42
HMGA2-209ENST00000539662 C11orf49Q9H6J7 331 aa12.42□□□□□ -0.42
HMGA2-209ENST00000539662 XPNPEP3Q9NQH7 507 aa12.42□□□□□ -0.42
HMGA2-209ENST00000539662 NRBP1Q9UHY1 535 aa12.42□□□□□ -0.42
HMGA2-209ENST00000539662 NAP1L2Q9ULW6 460 aaPredicted RBP12.42□□□□□ -0.42
HMGA2-209ENST00000539662 MRPL11Q9Y3B7 192 aaKnown RBP12.42□□□□□ -0.42
HMGA2-209ENST00000539662 CNTNAP5Q8WYK1 1306 aa12.41□□□□□ -0.42
HMGA2-209ENST00000539662 ASB14A6NK59 587 aa12.41□□□□□ -0.42
HMGA2-209ENST00000539662 GOLGA8AA7E2F4 631 aa12.41□□□□□ -0.42
HMGA2-209ENST00000539662 GOLGA8BA8MQT2 603 aa12.41□□□□□ -0.42
HMGA2-209ENST00000539662 ZBTB43O43298 467 aa12.41□□□□□ -0.42
HMGA2-209ENST00000539662 HMGB1P09429 215 aaKnown RBP12.41□□□□□ -0.42
HMGA2-209ENST00000539662 EDNRBP24530 442 aa12.41□□□□□ -0.42
HMGA2-209ENST00000539662 KIF5BP33176 963 aa12.41□□□□□ -0.42
HMGA2-209ENST00000539662 HSD17B4P51659 736 aa12.41□□□□□ -0.42
HMGA2-209ENST00000539662 ATN1P54259 1190 aaPredicted RBP12.41□□□□□ -0.42
HMGA2-209ENST00000539662 LRRC26Q2I0M4 334 aa12.41□□□□□ -0.42
HMGA2-209ENST00000539662 RUFY3Q7L099 469 aa12.41□□□□□ -0.42
HMGA2-209ENST00000539662 DPF3Q92784 378 aa12.41□□□□□ -0.42
HMGA2-209ENST00000539662 FERMT2Q96AC1 680 aa12.41□□□□□ -0.42
HMGA2-209ENST00000539662 AGXT2Q9BYV1 514 aa12.41□□□□□ -0.42
HMGA2-209ENST00000539662 SENP6Q9GZR1 1112 aaPredicted RBP12.41□□□□□ -0.42
HMGA2-209ENST00000539662 FAM184BQ9ULE4 1060 aa12.41□□□□□ -0.42
HMGA2-209ENST00000539662 DNM1LO00429 736 aa12.4□□□□□ -0.42
HMGA2-209ENST00000539662 ADAMTS3O15072 1205 aa12.4□□□□□ -0.42
HMGA2-209ENST00000539662 EPB41L2O43491 1005 aaKnown RBP12.4□□□□□ -0.42
HMGA2-209ENST00000539662 MSCO60682 206 aa12.4□□□□□ -0.42
HMGA2-209ENST00000539662 ARIH2O95376 493 aa12.4□□□□□ -0.42
HMGA2-209ENST00000539662 CALM1P0DP23 149 aa12.4□□□□□ -0.42
HMGA2-209ENST00000539662 CALM2P0DP24 149 aa12.4□□□□□ -0.42
HMGA2-209ENST00000539662 CALM3P0DP25 149 aa12.4□□□□□ -0.42
HMGA2-209ENST00000539662 RARBP10826 455 aa12.4□□□□□ -0.42
HMGA2-209ENST00000539662 EIF2AK2P19525 551 aaKnown RBP12.4□□□□□ -0.42
HMGA2-209ENST00000539662 SMARCA1P28370 1054 aa12.4□□□□□ -0.42
HMGA2-209ENST00000539662 BEX3Q00994 111 aa12.4□□□□□ -0.42
HMGA2-209ENST00000539662 GHRHRQ02643 423 aa12.4□□□□□ -0.42
HMGA2-209ENST00000539662 RTN1Q16799 776 aa12.4□□□□□ -0.42
HMGA2-209ENST00000539662 CCSAPQ6IQ19 270 aaPredicted RBP12.4□□□□□ -0.42
HMGA2-209ENST00000539662 TYW1BQ6NUM6 668 aa12.4□□□□□ -0.42
HMGA2-209ENST00000539662 IL31RAQ8NI17 732 aa12.4□□□□□ -0.42
HMGA2-209ENST00000539662 COPS5Q92905 334 aa12.4□□□□□ -0.42
HMGA2-209ENST00000539662 GPKOWQ92917 476 aaPredicted RBP eCLIP12.4□□□□□ -0.42
HMGA2-209ENST00000539662 RRP36Q96EU6 259 aaKnown RBP12.4□□□□□ -0.42
HMGA2-209ENST00000539662 ADD3Q9UEY8 706 aaKnown RBP12.4□□□□□ -0.42
HMGA2-209ENST00000539662 PNMA2Q9UL42 364 aa12.4□□□□□ -0.42
HMGA2-209ENST00000539662 GNEQ9Y223 722 aaKnown RBP12.4□□□□□ -0.42
HMGA2-209ENST00000539662 KIAA1217Q5T5P2 1943 aa12.39□□□□□ -0.43
HMGA2-209ENST00000539662 H0YGN5 161 aa12.39□□□□□ -0.43
HMGA2-209ENST00000539662 PSMA5P28066 241 aa12.39□□□□□ -0.43
HMGA2-209ENST00000539662 GNAQP50148 359 aa12.39□□□□□ -0.43
HMGA2-209ENST00000539662 CCT2P78371 535 aaKnown RBP12.39□□□□□ -0.43
HMGA2-209ENST00000539662 FGD1P98174 961 aa12.39□□□□□ -0.43
HMGA2-209ENST00000539662 TNFAIP2Q03169 654 aa12.39□□□□□ -0.43
HMGA2-209ENST00000539662 USP17L6PQ6QN14 398 aa12.39□□□□□ -0.43
HMGA2-209ENST00000539662 SYNE3Q6ZMZ3 975 aa12.39□□□□□ -0.43
HMGA2-209ENST00000539662 FCHSD1Q86WN1 690 aa12.39□□□□□ -0.43
HMGA2-209ENST00000539662 MCF2L2Q86YR7 1114 aa12.39□□□□□ -0.43
HMGA2-209ENST00000539662 FBXL16Q8N461 479 aa12.39□□□□□ -0.43
HMGA2-209ENST00000539662 KLHDC9Q8NEP7 349 aa12.39□□□□□ -0.43
HMGA2-209ENST00000539662 RMDN3Q96TC7 470 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms