RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 NETO1Q8TDF5 533 aa4.42□□□□□ -1.7
SNHG1-210ENST00000539303 DCAF4Q8WV16 495 aa4.42□□□□□ -1.7
SNHG1-210ENST00000539303 LEO1Q8WVC0 666 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-210ENST00000539303 PTCHD1Q96NR3 888 aa4.42□□□□□ -1.7
SNHG1-210ENST00000539303 CAAP1Q9H8G2 361 aa4.42□□□□□ -1.7
SNHG1-210ENST00000539303 MKNK2Q9HBH9 465 aa4.42□□□□□ -1.7
SNHG1-210ENST00000539303 INTS7Q9NVH2 962 aaKnown RBP4.42□□□□□ -1.7
SNHG1-210ENST00000539303 ERVK13-1Q9NX77 482 aa4.42□□□□□ -1.7
SNHG1-210ENST00000539303 PIM2Q9P1W9 311 aa4.42□□□□□ -1.7
SNHG1-210ENST00000539303 KLHL42Q9P2K6 505 aa4.42□□□□□ -1.7
SNHG1-210ENST00000539303 NPFFR2Q9Y5X5 522 aa4.42□□□□□ -1.7
SNHG1-210ENST00000539303 NPHP3-ACAD11A0A0J9YXS1 232 aa4.41□□□□□ -1.7
SNHG1-210ENST00000539303 SSU72P8A0A1W2PR75 194 aa4.41□□□□□ -1.7
SNHG1-210ENST00000539303 EFCAB14O75071 495 aa4.41□□□□□ -1.7
SNHG1-210ENST00000539303 ASLP04424 464 aa4.41□□□□□ -1.7
SNHG1-210ENST00000539303 SRGAP2CP0DJJ0 459 aa4.41□□□□□ -1.7
SNHG1-210ENST00000539303 FOSL1P15407 271 aa4.41□□□□□ -1.7
SNHG1-210ENST00000539303 IGFALSP35858 605 aa4.41□□□□□ -1.7
SNHG1-210ENST00000539303 LTBRP36941 435 aa4.41□□□□□ -1.7
SNHG1-210ENST00000539303 NOP2P46087 812 aaKnown RBP4.41□□□□□ -1.7
SNHG1-210ENST00000539303 NEK4P51957 841 aa4.41□□□□□ -1.7
SNHG1-210ENST00000539303 GUCY1A3Q02108 690 aa4.41□□□□□ -1.7
SNHG1-210ENST00000539303 STRN3Q13033 797 aa4.41□□□□□ -1.7
SNHG1-210ENST00000539303 AOC3Q16853 763 aa4.41□□□□□ -1.7
SNHG1-210ENST00000539303 CT47A1Q5JQC4 288 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-210ENST00000539303 ACBD5Q5T8D3 534 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-210ENST00000539303 PIK3R6Q5UE93 754 aa4.41□□□□□ -1.7
SNHG1-210ENST00000539303 EEF1DP3Q658K8 133 aa4.41□□□□□ -1.7
SNHG1-210ENST00000539303 RNF111Q6ZNA4 994 aa4.41□□□□□ -1.7
SNHG1-210ENST00000539303 WAPLQ7Z5K2 1190 aa4.41□□□□□ -1.7
SNHG1-210ENST00000539303 THAP5Q7Z6K1 395 aa4.41□□□□□ -1.7
SNHG1-210ENST00000539303 WFDC3Q8IUB2 231 aa4.41□□□□□ -1.7
SNHG1-210ENST00000539303 KSR1Q8IVT5 923 aa4.41□□□□□ -1.7
SNHG1-210ENST00000539303 AFAP1L2Q8N4X5 818 aa4.41□□□□□ -1.7
SNHG1-210ENST00000539303 DIO2Q92813 273 aa4.41□□□□□ -1.7
SNHG1-210ENST00000539303 MAGEB10Q96LZ2 347 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-210ENST00000539303 DDX56Q9NY93 547 aaKnown RBP4.41□□□□□ -1.7
SNHG1-210ENST00000539303 RNF112Q9ULX5 631 aa4.41□□□□□ -1.7
SNHG1-210ENST00000539303 MAPRE3Q9UPY8 281 aa4.41□□□□□ -1.7
SNHG1-210ENST00000539303 ATP8A1Q9Y2Q0 1164 aa4.41□□□□□ -1.7
SNHG1-210ENST00000539303 COQ6Q9Y2Z9 468 aa4.41□□□□□ -1.7
SNHG1-210ENST00000539303 TMEM265A0A087WTH1 108 aa4.4□□□□□ -1.71
SNHG1-210ENST00000539303 ZNF891A8MT65 544 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-210ENST00000539303 GSC2O15499 205 aa4.4□□□□□ -1.71
SNHG1-210ENST00000539303 PPP1R11O60927 126 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-210ENST00000539303 GLRX3O76003 335 aaKnown RBP4.4□□□□□ -1.71
SNHG1-210ENST00000539303 IGHA1P01876 353 aa4.4□□□□□ -1.71
SNHG1-210ENST00000539303 FURINP09958 794 aa4.4□□□□□ -1.71
SNHG1-210ENST00000539303 PAMP19021 973 aa4.4□□□□□ -1.71
SNHG1-210ENST00000539303 GPR85P60893 370 aa4.4□□□□□ -1.71
SNHG1-210ENST00000539303 NFKB2Q00653 900 aa4.4□□□□□ -1.71
SNHG1-210ENST00000539303 TESK1Q15569 626 aa4.4□□□□□ -1.71
SNHG1-210ENST00000539303 MSMPQ1L6U9 139 aa4.4□□□□□ -1.71
SNHG1-210ENST00000539303 PLEKHG6Q3KR16 790 aa4.4□□□□□ -1.71
SNHG1-210ENST00000539303 ZCCHC8Q6NZY4 707 aaKnown RBP4.4□□□□□ -1.71
SNHG1-210ENST00000539303 LBX2Q6XYB7 198 aa4.4□□□□□ -1.71
SNHG1-210ENST00000539303 ZNF574Q6ZN55 896 aaPredicted RBP4.4□□□□□ -1.71
SNHG1-210ENST00000539303 NLRP10Q86W26 655 aa4.4□□□□□ -1.71
SNHG1-210ENST00000539303 IFNL3Q8IZI9 196 aa4.4□□□□□ -1.71
SNHG1-210ENST00000539303 NXPE1Q8N323 547 aa4.4□□□□□ -1.71
SNHG1-210ENST00000539303 NAT16Q8N8M0 369 aa4.4□□□□□ -1.71
SNHG1-210ENST00000539303 PCDH19Q8TAB3 1148 aa4.4□□□□□ -1.71
SNHG1-210ENST00000539303 GPR27Q9NS67 375 aa4.4□□□□□ -1.71
SNHG1-210ENST00000539303 BTG4Q9NY30 223 aa4.4□□□□□ -1.71
SNHG1-210ENST00000539303 PCDHA2Q9Y5H9 948 aa4.4□□□□□ -1.71
SNHG1-210ENST00000539303 C7orf72A4D263 438 aa4.39□□□□□ -1.71
SNHG1-210ENST00000539303 ARVCFO00192 962 aa4.39□□□□□ -1.71
SNHG1-210ENST00000539303 AQP7O14520 342 aa4.39□□□□□ -1.71
SNHG1-210ENST00000539303 MED26O95402 600 aa4.39□□□□□ -1.71
SNHG1-210ENST00000539303 EYA4O95677 639 aa4.39□□□□□ -1.71
SNHG1-210ENST00000539303 CKMP06732 381 aa4.39□□□□□ -1.71
SNHG1-210ENST00000539303 POU3F2P20265 443 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-210ENST00000539303 SOX5P35711 763 aa4.39□□□□□ -1.71
SNHG1-210ENST00000539303 BCL6P41182 706 aa4.39□□□□□ -1.71
SNHG1-210ENST00000539303 ID4P47928 161 aa4.39□□□□□ -1.71
SNHG1-210ENST00000539303 KIR3DS1Q14943 382 aa4.39□□□□□ -1.71
SNHG1-210ENST00000539303 RALGPS1Q5JS13 557 aa4.39□□□□□ -1.71
SNHG1-210ENST00000539303 PRSS36Q5K4E3 855 aa4.39□□□□□ -1.71
SNHG1-210ENST00000539303 E4F1Q66K89 784 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-210ENST00000539303 CDCA2Q69YH5 1023 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-210ENST00000539303 TMPRSS7Q7RTY8 843 aa4.39□□□□□ -1.71
SNHG1-210ENST00000539303 ZC3H7AQ8IWR0 971 aaKnown RBP4.39□□□□□ -1.71
SNHG1-210ENST00000539303 IGSF22Q8N9C0 903 aa4.39□□□□□ -1.71
SNHG1-210ENST00000539303 DPF3Q92784 378 aa4.39□□□□□ -1.71
SNHG1-210ENST00000539303 HRASLS5Q96KN8 279 aa4.39□□□□□ -1.71
SNHG1-210ENST00000539303 MMP19Q99542 508 aa4.39□□□□□ -1.71
SNHG1-210ENST00000539303 G6PC3Q9BUM1 346 aa4.39□□□□□ -1.71
SNHG1-210ENST00000539303 CDIP1Q9H305 208 aa4.39□□□□□ -1.71
SNHG1-210ENST00000539303 IPPKQ9H8X2 491 aa4.39□□□□□ -1.71
SNHG1-210ENST00000539303 CARS2Q9HA77 564 aaKnown RBP4.39□□□□□ -1.71
SNHG1-210ENST00000539303 PRDM7Q9NQW5 492 aa4.39□□□□□ -1.71
SNHG1-210ENST00000539303 SAMD15Q9P1V8 674 aa4.39□□□□□ -1.71
SNHG1-210ENST00000539303 FBLN5Q9UBX5 448 aa4.39□□□□□ -1.71
SNHG1-210ENST00000539303 ZNF281Q9Y2X9 895 aa4.39□□□□□ -1.71
SNHG1-210ENST00000539303 SNX11Q9Y5W9 270 aa4.39□□□□□ -1.71
SNHG1-210ENST00000539303 M0R2C6 588 aa4.38□□□□□ -1.71
SNHG1-210ENST00000539303 MSTNO14793 375 aa4.38□□□□□ -1.71
SNHG1-210ENST00000539303 USP2O75604 605 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-210ENST00000539303 EFEMP2O95967 443 aa4.38□□□□□ -1.71
SNHG1-210ENST00000539303 SOD2P04179 222 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms