RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 SLURP1P55000 103 aa8.95□□□□□ -0.98
CCDC7-209ENST00000539197 COL9A2Q14055 689 aaPredicted RBP8.95□□□□□ -0.98
CCDC7-209ENST00000539197 RCSD1Q6JBY9 416 aa8.95□□□□□ -0.98
CCDC7-209ENST00000539197 PRRT2Q7Z6L0 340 aaPredicted RBP8.95□□□□□ -0.98
CCDC7-209ENST00000539197 FNIP1Q8TF40 1166 aa8.95□□□□□ -0.98
CCDC7-209ENST00000539197 KLHL6Q8WZ60 621 aa8.95□□□□□ -0.98
CCDC7-209ENST00000539197 SUSD2Q9UGT4 822 aa8.95□□□□□ -0.98
CCDC7-209ENST00000539197 SLC12A7Q9Y666 1083 aa8.95□□□□□ -0.98
CCDC7-209ENST00000539197 AURKAO14965 403 aa8.94□□□□□ -0.98
CCDC7-209ENST00000539197 GLI4P10075 376 aa8.94□□□□□ -0.98
CCDC7-209ENST00000539197 SOX9P48436 509 aa8.94□□□□□ -0.98
CCDC7-209ENST00000539197 EEF1DP3Q658K8 133 aa8.94□□□□□ -0.98
CCDC7-209ENST00000539197 DBX2Q6ZNG2 339 aa8.94□□□□□ -0.98
CCDC7-209ENST00000539197 ADAT2Q7Z6V5 191 aaKnown RBP8.94□□□□□ -0.98
CCDC7-209ENST00000539197 ZNF654Q8IZM8 581 aa8.94□□□□□ -0.98
CCDC7-209ENST00000539197 ZNF526Q8TF50 670 aaPredicted RBP8.94□□□□□ -0.98
CCDC7-209ENST00000539197 PMF1-BGLAPU3KQ54 211 aa8.94□□□□□ -0.98
CCDC7-209ENST00000539197 PRICKLE3O43900 615 aaPredicted RBP8.93□□□□□ -0.98
CCDC7-209ENST00000539197 ASGR2P07307 311 aa8.93□□□□□ -0.98
CCDC7-209ENST00000539197 NCAM1P13591 858 aa8.93□□□□□ -0.98
CCDC7-209ENST00000539197 GIPRP48546 466 aa8.93□□□□□ -0.98
CCDC7-209ENST00000539197 MFAP1P55081 439 aaKnown RBP8.93□□□□□ -0.98
CCDC7-209ENST00000539197 EIF6P56537 245 aaKnown RBP8.93□□□□□ -0.98
CCDC7-209ENST00000539197 C9orf131Q5VYM1 1079 aa8.93□□□□□ -0.98
CCDC7-209ENST00000539197 HEATR6Q6AI08 1181 aaKnown RBP8.93□□□□□ -0.98
CCDC7-209ENST00000539197 CABP7Q86V35 215 aa8.93□□□□□ -0.98
CCDC7-209ENST00000539197 CPNE8Q86YQ8 564 aa8.93□□□□□ -0.98
CCDC7-209ENST00000539197 GBP3Q9H0R5 595 aa8.93□□□□□ -0.98
CCDC7-209ENST00000539197 ALG3Q92685 438 aa8.92□□□□□ -0.98
CCDC7-209ENST00000539197 SPATA32Q96LK8 384 aa8.92□□□□□ -0.98
CCDC7-209ENST00000539197 SPATA25Q9BR10 227 aa8.92□□□□□ -0.98
CCDC7-209ENST00000539197 PHAXQ9H814 394 aaKnown RBP8.92□□□□□ -0.98
CCDC7-209ENST00000539197 GULP1Q9UBP9 304 aa8.92□□□□□ -0.98
CCDC7-209ENST00000539197 CGGBP1Q9UFW8 167 aaPredicted RBP8.92□□□□□ -0.98
CCDC7-209ENST00000539197 JAG2Q9Y219 1238 aa8.92□□□□□ -0.98
CCDC7-209ENST00000539197 PMLP29590 882 aa8.91□□□□□ -0.98
CCDC7-209ENST00000539197 HTRA3P83110 453 aa8.91□□□□□ -0.98
CCDC7-209ENST00000539197 SLC7A5Q01650 507 aa8.91□□□□□ -0.98
CCDC7-209ENST00000539197 DLX2Q07687 328 aaPredicted RBP8.91□□□□□ -0.98
CCDC7-209ENST00000539197 SCAMP3O14828 347 aaKnown RBP8.9□□□□□ -0.98
CCDC7-209ENST00000539197 PPM1BO75688 479 aa8.9□□□□□ -0.98
CCDC7-209ENST00000539197 PPP2R5EQ16537 467 aa8.9□□□□□ -0.98
CCDC7-209ENST00000539197 LIPIQ6XZB0 460 aa8.9□□□□□ -0.98
CCDC7-209ENST00000539197 LZTR1Q8N653 840 aa8.9□□□□□ -0.98
CCDC7-209ENST00000539197 GPRASP2Q96D09 838 aa8.9□□□□□ -0.98
CCDC7-209ENST00000539197 C2orf71A6NGG8 1288 aa8.89□□□□□ -0.99
CCDC7-209ENST00000539197 SEPHS1P49903 392 aa8.89□□□□□ -0.99
CCDC7-209ENST00000539197 NFKB2Q00653 900 aa8.89□□□□□ -0.99
CCDC7-209ENST00000539197 PLP2Q04941 152 aa8.89□□□□□ -0.99
CCDC7-209ENST00000539197 SAPCD2Q86UD0 394 aa8.89□□□□□ -0.99
CCDC7-209ENST00000539197 ARHGEF39Q8N4T4 335 aa8.89□□□□□ -0.99
CCDC7-209ENST00000539197 C19orf47Q8N9M1 422 aaKnown RBP8.89□□□□□ -0.99
CCDC7-209ENST00000539197 NOX5Q96PH1 765 aa8.89□□□□□ -0.99
CCDC7-209ENST00000539197 MTA3Q9BTC8 594 aa8.89□□□□□ -0.99
CCDC7-209ENST00000539197 USP40Q9NVE5 1235 aa8.89□□□□□ -0.99
CCDC7-209ENST00000539197 APEX2Q9UBZ4 518 aa8.89□□□□□ -0.99
CCDC7-209ENST00000539197 NUDT5Q9UKK9 219 aa8.89□□□□□ -0.99
CCDC7-209ENST00000539197 BACE2Q9Y5Z0 518 aa8.89□□□□□ -0.99
CCDC7-209ENST00000539197 RTP5Q14D33 572 aa8.88□□□□□ -0.99
CCDC7-209ENST00000539197 MBLAC2Q68D91 279 aa8.88□□□□□ -0.99
CCDC7-209ENST00000539197 B3GNT8Q7Z7M8 397 aa8.88□□□□□ -0.99
CCDC7-209ENST00000539197 FAM169BQ8N8A8 192 aa8.88□□□□□ -0.99
CCDC7-209ENST00000539197 ZNF513Q8N8E2 541 aaPredicted RBP8.88□□□□□ -0.99
CCDC7-209ENST00000539197 OR6P1Q8NGX9 317 aa8.88□□□□□ -0.99
CCDC7-209ENST00000539197 RASGRP4Q8TDF6 673 aa8.88□□□□□ -0.99
CCDC7-209ENST00000539197 TSPAN17Q96FV3 270 aa8.88□□□□□ -0.99
CCDC7-209ENST00000539197 SHDQ96IW2 340 aa8.88□□□□□ -0.99
CCDC7-209ENST00000539197 BDH2Q9BUT1 245 aa8.88□□□□□ -0.99
CCDC7-209ENST00000539197 LGR4Q9BXB1 951 aa8.88□□□□□ -0.99
CCDC7-209ENST00000539197 SIT1Q9Y3P8 196 aa8.88□□□□□ -0.99
CCDC7-209ENST00000539197 SH3D21A4FU49 640 aa8.87□□□□□ -0.99
CCDC7-209ENST00000539197 ADRB1P08588 477 aa8.87□□□□□ -0.99
CCDC7-209ENST00000539197 NASPP49321 788 aaPredicted RBP8.87□□□□□ -0.99
CCDC7-209ENST00000539197 HDLBPQ00341 1268 aaKnown RBP8.87□□□□□ -0.99
CCDC7-209ENST00000539197 AMPD2Q01433 879 aa8.87□□□□□ -0.99
CCDC7-209ENST00000539197 TRIM26Q12899 539 aaPredicted RBP8.87□□□□□ -0.99
CCDC7-209ENST00000539197 NT5DC1Q5TFE4 455 aa8.87□□□□□ -0.99
CCDC7-209ENST00000539197 NETO2Q8NC67 525 aa8.87□□□□□ -0.99
CCDC7-209ENST00000539197 PEX11GQ96HA9 241 aa8.87□□□□□ -0.99
CCDC7-209ENST00000539197 SYT3Q9BQG1 590 aa8.87□□□□□ -0.99
CCDC7-209ENST00000539197 SLC9A5Q14940 896 aa8.86□□□□□ -0.99
CCDC7-209ENST00000539197 SPATS1Q496A3 300 aa8.86□□□□□ -0.99
CCDC7-209ENST00000539197 ZFYVE27Q5T4F4 411 aa8.86□□□□□ -0.99
CCDC7-209ENST00000539197 KIAA1211LQ6NV74 962 aa8.86□□□□□ -0.99
CCDC7-209ENST00000539197 FERMT3Q86UX7 667 aa8.86□□□□□ -0.99
CCDC7-209ENST00000539197 NT5DC4Q86YG4 428 aa8.86□□□□□ -0.99
CCDC7-209ENST00000539197 SMARCC2Q8TAQ2 1214 aa8.86□□□□□ -0.99
CCDC7-209ENST00000539197 BORCS6Q96GS4 357 aa8.86□□□□□ -0.99
CCDC7-209ENST00000539197 GPRC5CQ9NQ84 441 aa8.86□□□□□ -0.99
CCDC7-209ENST00000539197 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.86□□□□□ -0.99
CCDC7-209ENST00000539197 SUGT1Q9Y2Z0 365 aa8.86□□□□□ -0.99
CCDC7-209ENST00000539197 TRBV23OR9-2A0A075B6M9 112 aa8.85□□□□□ -0.99
CCDC7-209ENST00000539197 C7orf72A4D263 438 aa8.85□□□□□ -0.99
CCDC7-209ENST00000539197 PAMP19021 973 aa8.85□□□□□ -0.99
CCDC7-209ENST00000539197 VAMP1P23763 118 aa8.85□□□□□ -0.99
CCDC7-209ENST00000539197 RBM10P98175 930 aaKnown RBP8.85□□□□□ -0.99
CCDC7-209ENST00000539197 GRB10Q13322 594 aa8.85□□□□□ -0.99
CCDC7-209ENST00000539197 UBXN11Q5T124 520 aa8.85□□□□□ -0.99
CCDC7-209ENST00000539197 GGNQ86UU5 652 aa8.85□□□□□ -0.99
CCDC7-209ENST00000539197 RCC1LQ96I51 464 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms