RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 RPAP3Q9H6T3 665 aaPredicted RBP28.86■■■□□ 2.21
KLHL42-202ENST00000539176 ELP3Q9H9T3 547 aa28.86■■■□□ 2.21
KLHL42-202ENST00000539176 AFG3L2Q9Y4W6 797 aa28.86■■■□□ 2.21
KLHL42-202ENST00000539176 CSADQ9Y600 493 aa28.86■■■□□ 2.21
KLHL42-202ENST00000539176 USP14P54578 494 aa28.85■■■□□ 2.21
KLHL42-202ENST00000539176 ATP2C1P98194 919 aaPredicted RBP28.85■■■□□ 2.21
KLHL42-202ENST00000539176 INF2Q27J81 1249 aa28.85■■■□□ 2.21
KLHL42-202ENST00000539176 REXO1Q8N1G1 1221 aaKnown RBP28.85■■■□□ 2.21
KLHL42-202ENST00000539176 RIC8AQ9NPQ8 531 aa28.85■■■□□ 2.21
KLHL42-202ENST00000539176 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.85■■■□□ 2.21
KLHL42-202ENST00000539176 SMTNL1A8MU46 457 aa28.85■■■□□ 2.21
KLHL42-202ENST00000539176 IKBKBO14920 756 aa28.85■■■□□ 2.21
KLHL42-202ENST00000539176 PLA2G6O60733 806 aa28.85■■■□□ 2.21
KLHL42-202ENST00000539176 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.85■■■□□ 2.21
KLHL42-202ENST00000539176 CSRNP2Q9H175 543 aa28.85■■■□□ 2.21
KLHL42-202ENST00000539176 RANBP17Q9H2T7 1088 aaKnown RBP28.85■■■□□ 2.21
KLHL42-202ENST00000539176 NMRK2Q9NPI5 230 aa28.85■■■□□ 2.21
KLHL42-202ENST00000539176 ZNF408Q9H9D4 720 aa28.84■■■□□ 2.21
KLHL42-202ENST00000539176 GRIN1Q05586 938 aa28.83■■■□□ 2.21
KLHL42-202ENST00000539176 PSTPIP2Q9H939 334 aa28.83■■■□□ 2.21
KLHL42-202ENST00000539176 POLR2DO15514 142 aaKnown RBP28.83■■■□□ 2.2
KLHL42-202ENST00000539176 CUL5Q93034 780 aa28.83■■■□□ 2.2
KLHL42-202ENST00000539176 SLF1Q9BQI6 1058 aa28.83■■■□□ 2.2
KLHL42-202ENST00000539176 PYM1Q9BRP8 204 aaKnown RBP28.83■■■□□ 2.2
KLHL42-202ENST00000539176 FLOT1O75955 427 aa28.82■■■□□ 2.2
KLHL42-202ENST00000539176 MDM2Q00987 491 aaPredicted RBP28.82■■■□□ 2.2
KLHL42-202ENST00000539176 PNOCQ13519 176 aa28.82■■■□□ 2.2
KLHL42-202ENST00000539176 POSTNQ15063 836 aa28.82■■■□□ 2.2
KLHL42-202ENST00000539176 KRT25Q7Z3Z0 450 aa28.82■■■□□ 2.2
KLHL42-202ENST00000539176 SPC24Q8NBT2 197 aa28.82■■■□□ 2.2
KLHL42-202ENST00000539176 PARP14Q460N5 1801 aa28.81■■■□□ 2.2
KLHL42-202ENST00000539176 USP17L15C9J2P7 530 aa28.81■■■□□ 2.2
KLHL42-202ENST00000539176 USP17L13C9JLJ4 530 aa28.81■■■□□ 2.2
KLHL42-202ENST00000539176 USP17L11C9JVI0 530 aa28.81■■■□□ 2.2
KLHL42-202ENST00000539176 USP17L18D6R9N7 530 aa28.81■■■□□ 2.2
KLHL42-202ENST00000539176 USP17L22D6RA61 530 aa28.81■■■□□ 2.2
KLHL42-202ENST00000539176 USP17L17D6RBQ6 530 aa28.81■■■□□ 2.2
KLHL42-202ENST00000539176 USP17L19D6RCP7 530 aa28.81■■■□□ 2.2
KLHL42-202ENST00000539176 USP17L20D6RJB6 530 aa28.81■■■□□ 2.2
KLHL42-202ENST00000539176 OFD1O75665 1012 aa28.81■■■□□ 2.2
KLHL42-202ENST00000539176 MCM7P33993 719 aa28.81■■■□□ 2.2
KLHL42-202ENST00000539176 USP17L24Q0WX57 530 aa28.81■■■□□ 2.2
KLHL42-202ENST00000539176 NT5DC1Q5TFE4 455 aa28.81■■■□□ 2.2
KLHL42-202ENST00000539176 ARL6IP4Q66PJ3 421 aaKnown RBP28.81■■■□□ 2.2
KLHL42-202ENST00000539176 USP17L6PQ6QN14 398 aa28.81■■■□□ 2.2
KLHL42-202ENST00000539176 DRC7Q8IY82 874 aa28.81■■■□□ 2.2
KLHL42-202ENST00000539176 PTPRFP10586 1907 aa28.81■■■□□ 2.2
KLHL42-202ENST00000539176 A0A087WWV3 80 aa28.8■■■□□ 2.2
KLHL42-202ENST00000539176 BIN1O00499 593 aa28.8■■■□□ 2.2
KLHL42-202ENST00000539176 NONOQ15233 471 aaKnown RBP eCLIP28.8■■■□□ 2.2
KLHL42-202ENST00000539176 SPECC1Q5M775 1068 aa28.8■■■□□ 2.2
KLHL42-202ENST00000539176 TRIML1Q8N9V2 468 aa28.8■■■□□ 2.2
KLHL42-202ENST00000539176 TTC12Q9H892 705 aaPredicted RBP28.8■■■□□ 2.2
KLHL42-202ENST00000539176 C19orf81C9J6K1 198 aa28.8■■■□□ 2.2
KLHL42-202ENST00000539176 ACTN4O43707 911 aaKnown RBP28.8■■■□□ 2.2
KLHL42-202ENST00000539176 ANKRD13AQ8IZ07 590 aa28.8■■■□□ 2.2
KLHL42-202ENST00000539176 PRPF38AQ8NAV1 312 aaKnown RBP28.8■■■□□ 2.2
KLHL42-202ENST00000539176 OTUD5Q96G74 571 aa28.8■■■□□ 2.2
KLHL42-202ENST00000539176 C12orf42Q96LP6 360 aa28.8■■■□□ 2.2
KLHL42-202ENST00000539176 OPLAHO14841 1288 aa28.79■■■□□ 2.2
KLHL42-202ENST00000539176 CLK2P49760 499 aaKnown RBP28.79■■■□□ 2.2
KLHL42-202ENST00000539176 MRPL12P52815 198 aaKnown RBP28.79■■■□□ 2.2
KLHL42-202ENST00000539176 PTGDRQ13258 359 aa28.79■■■□□ 2.2
KLHL42-202ENST00000539176 TBCKQ8TEA7 893 aa28.79■■■□□ 2.2
KLHL42-202ENST00000539176 DCAF8L1A6NGE4 600 aa28.78■■■□□ 2.2
KLHL42-202ENST00000539176 TMOD4Q9NZQ9 345 aa28.78■■■□□ 2.2
KLHL42-202ENST00000539176 PCDHA5Q9Y5H7 936 aa28.78■■■□□ 2.2
KLHL42-202ENST00000539176 ARMC9Q7Z3E5 817 aa28.78■■■□□ 2.2
KLHL42-202ENST00000539176 WNK4Q96J92 1243 aa28.78■■■□□ 2.2
KLHL42-202ENST00000539176 AGBL1Q96MI9 1066 aa28.78■■■□□ 2.2
KLHL42-202ENST00000539176 SERTAD1Q9UHV2 236 aa28.78■■■□□ 2.2
KLHL42-202ENST00000539176 DACH1Q9UI36 760 aa28.78■■■□□ 2.2
KLHL42-202ENST00000539176 PPP1R9AQ9ULJ8 1098 aa28.78■■■□□ 2.2
KLHL42-202ENST00000539176 RLFQ13129 1914 aa28.77■■■□□ 2.2
KLHL42-202ENST00000539176 ZNF536O15090 1300 aa28.76■■■□□ 2.2
KLHL42-202ENST00000539176 SLFN14P0C7P3 912 aa28.76■■■□□ 2.2
KLHL42-202ENST00000539176 LETM2Q2VYF4 491 aa28.76■■■□□ 2.2
KLHL42-202ENST00000539176 LDHDQ86WU2 507 aa28.76■■■□□ 2.2
KLHL42-202ENST00000539176 SYMPKQ92797 1274 aaKnown RBP28.76■■■□□ 2.2
KLHL42-202ENST00000539176 SMARCE1Q969G3 411 aa28.76■■■□□ 2.2
KLHL42-202ENST00000539176 ATG4CQ96DT6 458 aa28.76■■■□□ 2.2
KLHL42-202ENST00000539176 P2RX7Q99572 595 aaKnown RBP28.76■■■□□ 2.2
KLHL42-202ENST00000539176 MEIS2O14770 477 aa28.76■■■□□ 2.19
KLHL42-202ENST00000539176 IRF6O14896 467 aa28.76■■■□□ 2.19
KLHL42-202ENST00000539176 MYL5Q02045 173 aa28.76■■■□□ 2.19
KLHL42-202ENST00000539176 CPXCR1Q8N123 301 aa28.76■■■□□ 2.19
KLHL42-202ENST00000539176 MYH7BA7E2Y1 1941 aa28.75■■■□□ 2.19
KLHL42-202ENST00000539176 SMC2O95347 1197 aa28.75■■■□□ 2.19
KLHL42-202ENST00000539176 SARSP49591 514 aaKnown RBP28.75■■■□□ 2.19
KLHL42-202ENST00000539176 SH3D19Q5HYK7 790 aa28.75■■■□□ 2.19
KLHL42-202ENST00000539176 ERO1BQ86YB8 467 aa28.75■■■□□ 2.19
KLHL42-202ENST00000539176 SPATA20Q8TB22 786 aa28.75■■■□□ 2.19
KLHL42-202ENST00000539176 TBC1D5Q92609 795 aa28.75■■■□□ 2.19
KLHL42-202ENST00000539176 ZNF830Q96NB3 372 aaPredicted RBP28.75■■■□□ 2.19
KLHL42-202ENST00000539176 KCNF1Q9H3M0 494 aa28.75■■■□□ 2.19
KLHL42-202ENST00000539176 RAVER2Q9HCJ3 691 aaKnown RBP28.75■■■□□ 2.19
KLHL42-202ENST00000539176 LAD1O00515 517 aa28.74■■■□□ 2.19
KLHL42-202ENST00000539176 EDIL3O43854 480 aa28.74■■■□□ 2.19
KLHL42-202ENST00000539176 HOXA13P31271 388 aaPredicted RBP28.74■■■□□ 2.19
KLHL42-202ENST00000539176 NCAPHQ15003 741 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms