RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 DDX25Q9UHL0 483 aaKnown RBP16.7■□□□□ 0.26
ATL3-203ENST00000538786 SHTN1A0MZ66 631 aa16.7■□□□□ 0.26
ATL3-203ENST00000538786 USP17L15C9J2P7 530 aa16.7■□□□□ 0.26
ATL3-203ENST00000538786 USP17L13C9JLJ4 530 aa16.7■□□□□ 0.26
ATL3-203ENST00000538786 USP17L11C9JVI0 530 aa16.7■□□□□ 0.26
ATL3-203ENST00000538786 USP17L18D6R9N7 530 aa16.7■□□□□ 0.26
ATL3-203ENST00000538786 USP17L22D6RA61 530 aa16.7■□□□□ 0.26
ATL3-203ENST00000538786 USP17L17D6RBQ6 530 aa16.7■□□□□ 0.26
ATL3-203ENST00000538786 USP17L19D6RCP7 530 aa16.7■□□□□ 0.26
ATL3-203ENST00000538786 USP17L20D6RJB6 530 aa16.7■□□□□ 0.26
ATL3-203ENST00000538786 PLCG1P19174 1290 aa16.7■□□□□ 0.26
ATL3-203ENST00000538786 USP17L24Q0WX57 530 aa16.7■□□□□ 0.26
ATL3-203ENST00000538786 PDIA5Q14554 519 aa16.7■□□□□ 0.26
ATL3-203ENST00000538786 USP17L6PQ6QN14 398 aa16.7■□□□□ 0.26
ATL3-203ENST00000538786 SH2D4AQ9H788 454 aa16.7■□□□□ 0.26
ATL3-203ENST00000538786 MEIS2O14770 477 aa16.69■□□□□ 0.26
ATL3-203ENST00000538786 USP11P51784 963 aa16.69■□□□□ 0.26
ATL3-203ENST00000538786 STAT2P52630 851 aa16.69■□□□□ 0.26
ATL3-203ENST00000538786 TRAF1Q13077 416 aa16.69■□□□□ 0.26
ATL3-203ENST00000538786 TNFAIP1Q13829 316 aa16.69■□□□□ 0.26
ATL3-203ENST00000538786 DHX8Q14562 1220 aaKnown RBP16.69■□□□□ 0.26
ATL3-203ENST00000538786 ZNF658Q5TYW1 1059 aaPredicted RBP16.69■□□□□ 0.26
ATL3-203ENST00000538786 SPATA1Q5VX52 437 aa16.69■□□□□ 0.26
ATL3-203ENST00000538786 CALML4Q96GE6 196 aa16.69■□□□□ 0.26
ATL3-203ENST00000538786 MMTAG2Q9BU76 263 aaKnown RBP16.69■□□□□ 0.26
ATL3-203ENST00000538786 LRWD1Q9UFC0 647 aa16.69■□□□□ 0.26
ATL3-203ENST00000538786 PRR12Q9ULL5 1215 aa16.69■□□□□ 0.26
ATL3-203ENST00000538786 SYNRGQ9UMZ2 1314 aa16.69■□□□□ 0.26
ATL3-203ENST00000538786 SNAP25P60880 206 aa16.68■□□□□ 0.26
ATL3-203ENST00000538786 RASA3Q14644 834 aa16.68■□□□□ 0.26
ATL3-203ENST00000538786 KIAA1755Q5JYT7 1200 aa16.68■□□□□ 0.26
ATL3-203ENST00000538786 TMC6Q7Z403 805 aa16.68■□□□□ 0.26
ATL3-203ENST00000538786 SMYD4Q8IYR2 804 aaPredicted RBP16.68■□□□□ 0.26
ATL3-203ENST00000538786 DPF2Q92785 391 aa16.68■□□□□ 0.26
ATL3-203ENST00000538786 PLIN2Q99541 437 aa16.68■□□□□ 0.26
ATL3-203ENST00000538786 ANO3Q9BYT9 981 aa16.68■□□□□ 0.26
ATL3-203ENST00000538786 VCPKMTQ9H867 229 aa16.68■□□□□ 0.26
ATL3-203ENST00000538786 FZD9O00144 591 aa16.68■□□□□ 0.26
ATL3-203ENST00000538786 ASNSP08243 561 aa16.68■□□□□ 0.26
ATL3-203ENST00000538786 PTGER2P43116 358 aa16.68■□□□□ 0.26
ATL3-203ENST00000538786 KCNB1Q14721 858 aa16.68■□□□□ 0.26
ATL3-203ENST00000538786 TEX2Q8IWB9 1127 aa16.68■□□□□ 0.26
ATL3-203ENST00000538786 C17orf53Q8N3J3 647 aaPredicted RBP16.68■□□□□ 0.26
ATL3-203ENST00000538786 LRRC15Q8TF66 581 aa16.68■□□□□ 0.26
ATL3-203ENST00000538786 CYP3A7-CYP3A51PA0A087WV96 503 aa16.67■□□□□ 0.26
ATL3-203ENST00000538786 FOSP01100 380 aaPredicted RBP16.67■□□□□ 0.26
ATL3-203ENST00000538786 CDK11BP21127 795 aaKnown RBP16.67■□□□□ 0.26
ATL3-203ENST00000538786 CYP3A7P24462 503 aa16.67■□□□□ 0.26
ATL3-203ENST00000538786 GMPSP49915 693 aaPredicted RBP16.67■□□□□ 0.26
ATL3-203ENST00000538786 ARID5BQ14865 1188 aa16.67■□□□□ 0.26
ATL3-203ENST00000538786 USH1GQ495M9 461 aa16.67■□□□□ 0.26
ATL3-203ENST00000538786 FAM83BQ5T0W9 1011 aa16.67■□□□□ 0.26
ATL3-203ENST00000538786 KLHL10Q6JEL2 608 aa16.67■□□□□ 0.26
ATL3-203ENST00000538786 MOXD1Q6UVY6 613 aa16.67■□□□□ 0.26
ATL3-203ENST00000538786 HAS1Q92839 578 aa16.67■□□□□ 0.26
ATL3-203ENST00000538786 PLA2G6O60733 806 aa16.66■□□□□ 0.26
ATL3-203ENST00000538786 EGFRP00533 1210 aa16.66■□□□□ 0.26
ATL3-203ENST00000538786 RASSF7Q02833 373 aa16.66■□□□□ 0.26
ATL3-203ENST00000538786 MICALL2Q8IY33 904 aa16.66■□□□□ 0.26
ATL3-203ENST00000538786 CCDC150Q8NCX0 1101 aa16.66■□□□□ 0.26
ATL3-203ENST00000538786 CHURC1Q8WUH1 139 aa16.66■□□□□ 0.26
ATL3-203ENST00000538786 CRYGNQ8WXF5 182 aa16.66■□□□□ 0.26
ATL3-203ENST00000538786 TEPSINQ96N21 525 aa16.66■□□□□ 0.26
ATL3-203ENST00000538786 NAP1L5Q96NT1 182 aaPredicted RBP16.66■□□□□ 0.26
ATL3-203ENST00000538786 SAMSN1Q9NSI8 373 aaKnown RBP16.66■□□□□ 0.26
ATL3-203ENST00000538786 STK17AQ9UEE5 414 aa16.66■□□□□ 0.26
ATL3-203ENST00000538786 RWDD2AQ9UIY3 292 aa16.66■□□□□ 0.26
ATL3-203ENST00000538786 PHF20L1A8MW92 1017 aa16.66■□□□□ 0.26
ATL3-203ENST00000538786 AMPD3Q01432 767 aa16.66■□□□□ 0.26
ATL3-203ENST00000538786 GRB10Q13322 594 aa16.66■□□□□ 0.26
ATL3-203ENST00000538786 VSTM4Q8IW00 320 aa16.66■□□□□ 0.26
ATL3-203ENST00000538786 MBOAT7Q96N66 472 aa16.66■□□□□ 0.26
ATL3-203ENST00000538786 CTNND2Q9UQB3 1225 aa16.66■□□□□ 0.26
ATL3-203ENST00000538786 KLRC4O43908 158 aa16.65■□□□□ 0.26
ATL3-203ENST00000538786 RHOBTB3O94955 611 aa16.65■□□□□ 0.26
ATL3-203ENST00000538786 PRELPP51888 382 aa16.65■□□□□ 0.26
ATL3-203ENST00000538786 STX17P56962 302 aa16.65■□□□□ 0.26
ATL3-203ENST00000538786 KMT5BQ4FZB7 885 aa16.65■□□□□ 0.26
ATL3-203ENST00000538786 HSP90AA4PQ58FG1 418 aa16.65■□□□□ 0.26
ATL3-203ENST00000538786 CDKAL1Q5VV42 579 aa16.65■□□□□ 0.26
ATL3-203ENST00000538786 KRT79Q5XKE5 535 aa16.65■□□□□ 0.26
ATL3-203ENST00000538786 FAM160B2Q86V87 743 aa16.65■□□□□ 0.26
ATL3-203ENST00000538786 C7orf25Q9BPX7 421 aa16.65■□□□□ 0.26
ATL3-203ENST00000538786 TRIM9Q9C026 710 aa16.65■□□□□ 0.26
ATL3-203ENST00000538786 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.65■□□□□ 0.26
ATL3-203ENST00000538786 PCDHA12Q9UN75 941 aa16.65■□□□□ 0.26
ATL3-203ENST00000538786 POTEMA6NI47 508 aa16.64■□□□□ 0.26
ATL3-203ENST00000538786 SPDYE3A6NKU9 549 aa16.64■□□□□ 0.26
ATL3-203ENST00000538786 PIK3CDO00329 1044 aa16.64■□□□□ 0.26
ATL3-203ENST00000538786 OPLAHO14841 1288 aa16.64■□□□□ 0.26
ATL3-203ENST00000538786 MARCH6O60337 910 aa16.64■□□□□ 0.26
ATL3-203ENST00000538786 SKILP12757 684 aa16.64■□□□□ 0.26
ATL3-203ENST00000538786 ARHGAP4P98171 946 aa16.64■□□□□ 0.26
ATL3-203ENST00000538786 PAK1Q13153 545 aa16.64■□□□□ 0.26
ATL3-203ENST00000538786 CDK5RAP3Q96JB5 506 aa16.64■□□□□ 0.26
ATL3-203ENST00000538786 P2RX7Q99572 595 aaKnown RBP16.64■□□□□ 0.26
ATL3-203ENST00000538786 RANBP17Q9H2T7 1088 aaKnown RBP16.64■□□□□ 0.26
ATL3-203ENST00000538786 KCNMB3Q9NPA1 279 aa16.64■□□□□ 0.26
ATL3-203ENST00000538786 GINM1Q9NU53 330 aa16.64■□□□□ 0.26
ATL3-203ENST00000538786 INTS13Q9NVM9 706 aa16.64■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms