RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 SEMA6BQ9H3T3 888 aa13.38□□□□□ -0.27
CPNE8-203ENST00000538596 NHEJ1Q9H9Q4 299 aaPredicted RBP13.38□□□□□ -0.27
CPNE8-203ENST00000538596 LEMD3Q9Y2U8 911 aa13.38□□□□□ -0.27
CPNE8-203ENST00000538596 AFF2P51816 1311 aa13.37□□□□□ -0.27
CPNE8-203ENST00000538596 CCDC66A2RUB6 948 aa13.37□□□□□ -0.27
CPNE8-203ENST00000538596 UFL1O94874 794 aa13.37□□□□□ -0.27
CPNE8-203ENST00000538596 RFC4P35249 363 aa13.37□□□□□ -0.27
CPNE8-203ENST00000538596 DYMQ7RTS9 669 aa13.37□□□□□ -0.27
CPNE8-203ENST00000538596 KRT26Q7Z3Y9 468 aa13.37□□□□□ -0.27
CPNE8-203ENST00000538596 KRT25Q7Z3Z0 450 aa13.37□□□□□ -0.27
CPNE8-203ENST00000538596 GJA10Q969M2 543 aa13.37□□□□□ -0.27
CPNE8-203ENST00000538596 RRP36Q96EU6 259 aaKnown RBP13.37□□□□□ -0.27
CPNE8-203ENST00000538596 UIMC1Q96RL1 719 aa13.37□□□□□ -0.27
CPNE8-203ENST00000538596 C6orf50Q9HD87 102 aa13.37□□□□□ -0.27
CPNE8-203ENST00000538596 CD209Q9NNX6 404 aa13.37□□□□□ -0.27
CPNE8-203ENST00000538596 ADAM21Q9UKJ8 722 aa13.37□□□□□ -0.27
CPNE8-203ENST00000538596 DDX60LQ5H9U9 1706 aaKnown RBP13.37□□□□□ -0.27
CPNE8-203ENST00000538596 MACROD2A1Z1Q3 448 aa13.37□□□□□ -0.27
CPNE8-203ENST00000538596 EPHB6O15197 1021 aa13.37□□□□□ -0.27
CPNE8-203ENST00000538596 ZNF185O15231 689 aa13.37□□□□□ -0.27
CPNE8-203ENST00000538596 MYL1P05976 194 aa13.37□□□□□ -0.27
CPNE8-203ENST00000538596 TUBB2AQ13885 445 aa13.37□□□□□ -0.27
CPNE8-203ENST00000538596 HDXQ7Z353 690 aa13.37□□□□□ -0.27
CPNE8-203ENST00000538596 NEDD1Q8NHV4 660 aa13.37□□□□□ -0.27
CPNE8-203ENST00000538596 JAKMIP2Q96AA8 810 aa13.37□□□□□ -0.27
CPNE8-203ENST00000538596 TRERF1Q96PN7 1200 aa13.37□□□□□ -0.27
CPNE8-203ENST00000538596 C7orf25Q9BPX7 421 aa13.37□□□□□ -0.27
CPNE8-203ENST00000538596 HINFPQ9BQA5 517 aa13.37□□□□□ -0.27
CPNE8-203ENST00000538596 TUBB2BQ9BVA1 445 aa13.37□□□□□ -0.27
CPNE8-203ENST00000538596 HAUS4Q9H6D7 363 aa13.37□□□□□ -0.27
CPNE8-203ENST00000538596 SEC63Q9UGP8 760 aaKnown RBP13.37□□□□□ -0.27
CPNE8-203ENST00000538596 CDK5RAP2Q96SN8 1893 aa13.37□□□□□ -0.27
CPNE8-203ENST00000538596 PSMD14O00487 310 aa13.36□□□□□ -0.27
CPNE8-203ENST00000538596 SLC37A4O43826 429 aa13.36□□□□□ -0.27
CPNE8-203ENST00000538596 ZMYND10O75800 440 aa13.36□□□□□ -0.27
CPNE8-203ENST00000538596 TDP2O95551 362 aa13.36□□□□□ -0.27
CPNE8-203ENST00000538596 MEA1Q16626 185 aa13.36□□□□□ -0.27
CPNE8-203ENST00000538596 SOGA3Q5TF21 947 aa13.36□□□□□ -0.27
CPNE8-203ENST00000538596 LRRC47Q8N1G4 583 aaKnown RBP13.36□□□□□ -0.27
CPNE8-203ENST00000538596 CNBD1Q8NA66 436 aa13.36□□□□□ -0.27
CPNE8-203ENST00000538596 SMCR8Q8TEV9 937 aaPredicted RBP13.36□□□□□ -0.27
CPNE8-203ENST00000538596 AK8Q96MA6 479 aa13.36□□□□□ -0.27
CPNE8-203ENST00000538596 NUDT12Q9BQG2 462 aa13.36□□□□□ -0.27
CPNE8-203ENST00000538596 VPS18Q9P253 973 aa13.36□□□□□ -0.27
CPNE8-203ENST00000538596 POTEMA6NI47 508 aa13.36□□□□□ -0.27
CPNE8-203ENST00000538596 MYMKA6NI61 221 aa13.36□□□□□ -0.27
CPNE8-203ENST00000538596 ZNF263O14978 683 aa13.36□□□□□ -0.27
CPNE8-203ENST00000538596 EDIL3O43854 480 aa13.36□□□□□ -0.27
CPNE8-203ENST00000538596 PHACTR2O75167 634 aa13.36□□□□□ -0.27
CPNE8-203ENST00000538596 LDHCP07864 332 aa13.36□□□□□ -0.27
CPNE8-203ENST00000538596 GNA11P29992 359 aa13.36□□□□□ -0.27
CPNE8-203ENST00000538596 GRB10Q13322 594 aa13.36□□□□□ -0.27
CPNE8-203ENST00000538596 REXO1Q8N1G1 1221 aaKnown RBP13.36□□□□□ -0.27
CPNE8-203ENST00000538596 GLIS3Q8NEA6 775 aa13.36□□□□□ -0.27
CPNE8-203ENST00000538596 LZTS2Q9BRK4 669 aa13.36□□□□□ -0.27
CPNE8-203ENST00000538596 BLOC1S4Q9NUP1 217 aa13.36□□□□□ -0.27
CPNE8-203ENST00000538596 LRRIQ3A6PVS8 624 aaPredicted RBP13.35□□□□□ -0.27
CPNE8-203ENST00000538596 POTEB2H3BUK9 544 aa13.35□□□□□ -0.27
CPNE8-203ENST00000538596 ZBTB22O15209 634 aa13.35□□□□□ -0.27
CPNE8-203ENST00000538596 RHBDL3P58872 404 aa13.35□□□□□ -0.27
CPNE8-203ENST00000538596 FAM193AP78312 1265 aa13.35□□□□□ -0.27
CPNE8-203ENST00000538596 ATP2B2Q01814 1243 aa13.35□□□□□ -0.27
CPNE8-203ENST00000538596 PICALMQ13492 652 aa13.35□□□□□ -0.27
CPNE8-203ENST00000538596 CASP8Q14790 479 aa13.35□□□□□ -0.27
CPNE8-203ENST00000538596 MFSD14BQ5SR56 506 aa13.35□□□□□ -0.27
CPNE8-203ENST00000538596 TMED8Q6PL24 325 aaPredicted RBP13.35□□□□□ -0.27
CPNE8-203ENST00000538596 GDAP1L1Q96MZ0 367 aa13.35□□□□□ -0.27
CPNE8-203ENST00000538596 SAR1BQ9Y6B6 198 aa13.35□□□□□ -0.27
CPNE8-203ENST00000538596 GPR75-ASB3A0A0A6YYF3 556 aa13.35□□□□□ -0.27
CPNE8-203ENST00000538596 ERLIN1O75477 346 aa13.35□□□□□ -0.27
CPNE8-203ENST00000538596 FAM196AQ6ZSG2 479 aa13.35□□□□□ -0.27
CPNE8-203ENST00000538596 PNMA5Q96PV4 448 aa13.35□□□□□ -0.27
CPNE8-203ENST00000538596 CUEDC2Q9H467 287 aa13.35□□□□□ -0.27
CPNE8-203ENST00000538596 FAM207AQ9NSI2 230 aaPredicted RBP13.35□□□□□ -0.27
CPNE8-203ENST00000538596 SPATA31A6Q5VVP1 1343 aa13.35□□□□□ -0.27
CPNE8-203ENST00000538596 ZNF831Q5JPB2 1677 aa13.35□□□□□ -0.27
CPNE8-203ENST00000538596 BTAF1O14981 1849 aa13.35□□□□□ -0.27
CPNE8-203ENST00000538596 BICDL2A1A5D9 508 aa13.34□□□□□ -0.27
CPNE8-203ENST00000538596 RGL2O15211 777 aa13.34□□□□□ -0.27
CPNE8-203ENST00000538596 SLURP2P0DP57 97 aa13.34□□□□□ -0.27
CPNE8-203ENST00000538596 LMAN1P49257 510 aa13.34□□□□□ -0.27
CPNE8-203ENST00000538596 ZBED6P86452 979 aa13.34□□□□□ -0.27
CPNE8-203ENST00000538596 TRAPPC3LQ5T215 181 aa13.34□□□□□ -0.27
CPNE8-203ENST00000538596 LRWD1Q9UFC0 647 aa13.34□□□□□ -0.27
CPNE8-203ENST00000538596 PDE2AO00408 941 aaPredicted RBP13.34□□□□□ -0.27
CPNE8-203ENST00000538596 KRT83P78385 493 aa13.34□□□□□ -0.27
CPNE8-203ENST00000538596 LRRC41Q15345 812 aa13.34□□□□□ -0.27
CPNE8-203ENST00000538596 PRR5LQ6MZQ0 368 aa13.34□□□□□ -0.27
CPNE8-203ENST00000538596 KCNK18Q7Z418 384 aa13.34□□□□□ -0.27
CPNE8-203ENST00000538596 NOC3LQ8WTT2 800 aaKnown RBP13.34□□□□□ -0.27
CPNE8-203ENST00000538596 CALML4Q96GE6 196 aa13.34□□□□□ -0.27
CPNE8-203ENST00000538596 GJD4Q96KN9 370 aaPredicted RBP13.34□□□□□ -0.27
CPNE8-203ENST00000538596 GPCPD1Q9NPB8 672 aa13.34□□□□□ -0.27
CPNE8-203ENST00000538596 ZNHIT6Q9NWK9 470 aaKnown RBP13.34□□□□□ -0.27
CPNE8-203ENST00000538596 FAN1Q9Y2M0 1017 aa13.34□□□□□ -0.27
CPNE8-203ENST00000538596 F8W031 263 aaPredicted RBP13.34□□□□□ -0.27
CPNE8-203ENST00000538596 PDHBP11177 359 aa13.34□□□□□ -0.27
CPNE8-203ENST00000538596 IDEP14735 1019 aa13.34□□□□□ -0.27
CPNE8-203ENST00000538596 CYLC1P35663 651 aaPredicted RBP13.34□□□□□ -0.27
CPNE8-203ENST00000538596 CALCRLQ16602 461 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms