RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 SPZ1Q9BXG8 430 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 HESX1Q9UBX0 185 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 MAD1L1Q9Y6D9 718 aa10.84□□□□□ -0.67
COL4A6-208ENST00000538570 ZMYM4Q5VZL5 1548 aa10.83□□□□□ -0.67
COL4A6-208ENST00000538570 ZBTB22O15209 634 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 ZBTB24O43167 697 aaPredicted RBP10.83□□□□□ -0.68
COL4A6-208ENST00000538570 S100BP04271 92 aaPredicted RBP10.83□□□□□ -0.68
COL4A6-208ENST00000538570 LMNB2Q03252 620 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 NME8Q8N427 588 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 EXOC4Q96A65 974 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 CDCA7Q9BWT1 371 aaPredicted RBP10.83□□□□□ -0.68
COL4A6-208ENST00000538570 CXorf56Q9H5V9 222 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 PSTPIP2Q9H939 334 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 PYCARDQ9ULZ3 195 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 INHBAP08476 426 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 RNASELQ05823 741 aaKnown RBP10.83□□□□□ -0.68
COL4A6-208ENST00000538570 PDCD2Q16342 344 aaPredicted RBP10.83□□□□□ -0.68
COL4A6-208ENST00000538570 POMGNT1Q8WZA1 660 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 RMDN2Q96LZ7 410 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 ZNF408Q9H9D4 720 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 INTS9Q9NV88 658 aaKnown RBP10.83□□□□□ -0.68
COL4A6-208ENST00000538570 EPN1Q9Y6I3 576 aaPredicted RBP10.83□□□□□ -0.68
COL4A6-208ENST00000538570 SBNO1A3KN83 1393 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 hCG_2014768A0A024R1R8 64 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 GPC4O75487 556 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 GUCY2CP25092 1073 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 GALNT17Q6IS24 598 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 FAM178BQ8IXR5 827 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 MRPL46Q9H2W6 279 aaKnown RBP10.83□□□□□ -0.68
COL4A6-208ENST00000538570 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.83□□□□□ -0.68
COL4A6-208ENST00000538570 ESYT2A0FGR8 921 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 TESPA1A2RU30 521 aaPredicted RBP10.83□□□□□ -0.68
COL4A6-208ENST00000538570 EIF3CLB5ME19 914 aaKnown RBP10.83□□□□□ -0.68
COL4A6-208ENST00000538570 DTNBO60941 627 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 KCNA6P17658 529 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 PDE6BP35913 854 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 YWHAGP61981 247 aaKnown RBP eCLIP10.83□□□□□ -0.68
COL4A6-208ENST00000538570 NEK8Q86SG6 692 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 EIF3CQ99613 913 aaKnown RBP10.83□□□□□ -0.68
COL4A6-208ENST00000538570 MLXIPQ9HAP2 919 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 FANCLQ9NW38 375 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 DDX25Q9UHL0 483 aaKnown RBP10.83□□□□□ -0.68
COL4A6-208ENST00000538570 ZNF711Q9Y462 761 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 SCINQ9Y6U3 715 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 H7C0C1 242 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 ATP5OP48047 213 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 TERF2Q15554 542 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 XKR9Q5GH70 373 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 GRAMD4Q6IC98 578 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 ARMCX5Q6P1M9 558 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 PPM1KQ8N3J5 372 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 LARGE2Q8N3Y3 721 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 USP28Q96RU2 1077 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 SLC52A2Q9HAB3 445 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 EPS15L1Q9UBC2 864 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 COL4A3BPQ9Y5P4 624 aa10.83□□□□□ -0.68
COL4A6-208ENST00000538570 PFKFB2O60825 505 aa10.82□□□□□ -0.68
COL4A6-208ENST00000538570 IL1RL1Q01638 556 aa10.82□□□□□ -0.68
COL4A6-208ENST00000538570 ADAM9Q13443 819 aa10.82□□□□□ -0.68
COL4A6-208ENST00000538570 KIF24Q5T7B8 1368 aa10.82□□□□□ -0.68
COL4A6-208ENST00000538570 POC1B-GALNT4F8VUJ3 575 aa10.82□□□□□ -0.68
COL4A6-208ENST00000538570 H0YIN7 160 aa10.82□□□□□ -0.68
COL4A6-208ENST00000538570 ADPGKQ9BRR6 497 aa10.82□□□□□ -0.68
COL4A6-208ENST00000538570 BZW2Q9Y6E2 419 aaKnown RBP10.82□□□□□ -0.68
COL4A6-208ENST00000538570 A6NJR5 290 aa10.82□□□□□ -0.68
COL4A6-208ENST00000538570 RFX1P22670 979 aa10.82□□□□□ -0.68
COL4A6-208ENST00000538570 NSFP46459 744 aaKnown RBP10.82□□□□□ -0.68
COL4A6-208ENST00000538570 DMP1Q13316 513 aaPredicted RBP10.82□□□□□ -0.68
COL4A6-208ENST00000538570 TTBK2Q6IQ55 1244 aa10.82□□□□□ -0.68
COL4A6-208ENST00000538570 RAB44Q7Z6P3 723 aaPredicted RBP10.82□□□□□ -0.68
COL4A6-208ENST00000538570 TRIM42Q8IWZ5 723 aa10.82□□□□□ -0.68
COL4A6-208ENST00000538570 RABGGTAQ92696 567 aa10.82□□□□□ -0.68
COL4A6-208ENST00000538570 NBPF3Q9H094 633 aa10.82□□□□□ -0.68
COL4A6-208ENST00000538570 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.82□□□□□ -0.68
COL4A6-208ENST00000538570 UTP6Q9NYH9 597 aaKnown RBP10.82□□□□□ -0.68
COL4A6-208ENST00000538570 POLR2MP0CAP2 368 aa10.82□□□□□ -0.68
COL4A6-208ENST00000538570 CDC25BP30305 580 aa10.82□□□□□ -0.68
COL4A6-208ENST00000538570 PIK3CAP42336 1068 aa10.82□□□□□ -0.68
COL4A6-208ENST00000538570 AOC3Q16853 763 aa10.82□□□□□ -0.68
COL4A6-208ENST00000538570 FBXO41Q8TF61 875 aa10.82□□□□□ -0.68
COL4A6-208ENST00000538570 TEKT3Q9BXF9 490 aa10.82□□□□□ -0.68
COL4A6-208ENST00000538570 CCDC87Q9NVE4 849 aa10.82□□□□□ -0.68
COL4A6-208ENST00000538570 TSC22D4Q9Y3Q8 395 aa10.82□□□□□ -0.68
COL4A6-208ENST00000538570 NOC2LQ9Y3T9 749 aaKnown RBP10.82□□□□□ -0.68
COL4A6-208ENST00000538570 DLATP10515 647 aaKnown RBP10.82□□□□□ -0.68
COL4A6-208ENST00000538570 KSR1Q8IVT5 923 aa10.82□□□□□ -0.68
COL4A6-208ENST00000538570 SLC39A2Q9NP94 309 aa10.82□□□□□ -0.68
COL4A6-208ENST00000538570 PTPN22Q9Y2R2 807 aa10.82□□□□□ -0.68
COL4A6-208ENST00000538570 MRPL11Q9Y3B7 192 aaKnown RBP10.82□□□□□ -0.68
COL4A6-208ENST00000538570 FRMPD2Q68DX3 1309 aaPredicted RBP10.82□□□□□ -0.68
COL4A6-208ENST00000538570 CHL1O00533 1208 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 ABL1P00519 1130 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 CASP2P42575 452 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 COPB1P53618 953 aaKnown RBP10.81□□□□□ -0.68
COL4A6-208ENST00000538570 STX1BP61266 288 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 TMTC3Q6ZXV5 915 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 RAPH1Q70E73 1250 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 MAP7D3Q8IWC1 876 aa10.81□□□□□ -0.68
COL4A6-208ENST00000538570 CMTR1Q8N1G2 835 aaKnown RBP10.81□□□□□ -0.68
COL4A6-208ENST00000538570 TAB3Q8N5C8 712 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms