RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 PI4KBQ9UBF8 816 aa15.74■□□□□ 0.11
LIMK1-208ENST00000538333 PSMA7O14818 248 aa15.73■□□□□ 0.11
LIMK1-208ENST00000538333 ATP2B2Q01814 1243 aa15.73■□□□□ 0.11
LIMK1-208ENST00000538333 STIM1Q13586 685 aa15.73■□□□□ 0.11
LIMK1-208ENST00000538333 TATDN1Q6P1N9 297 aa15.73■□□□□ 0.11
LIMK1-208ENST00000538333 RAD9BQ6WBX8 426 aa15.73■□□□□ 0.11
LIMK1-208ENST00000538333 CNGA4Q8IV77 575 aa15.73■□□□□ 0.11
LIMK1-208ENST00000538333 ANKRD20A12PQ8NF67 263 aa15.73■□□□□ 0.11
LIMK1-208ENST00000538333 CPLX3Q8WVH0 158 aa15.73■□□□□ 0.11
LIMK1-208ENST00000538333 CUL5Q93034 780 aa15.73■□□□□ 0.11
LIMK1-208ENST00000538333 CCDC51Q96ER9 411 aa15.73■□□□□ 0.11
LIMK1-208ENST00000538333 DHTKD1Q96HY7 919 aaPredicted RBP15.73■□□□□ 0.11
LIMK1-208ENST00000538333 THAP9Q9H5L6 903 aa15.73■□□□□ 0.11
LIMK1-208ENST00000538333 NYAP2Q9P242 653 aa15.73■□□□□ 0.11
LIMK1-208ENST00000538333 SERPINA10Q9UK55 444 aa15.73■□□□□ 0.11
LIMK1-208ENST00000538333 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.73■□□□□ 0.11
LIMK1-208ENST00000538333 EEF2P13639 858 aaKnown RBP15.73■□□□□ 0.11
LIMK1-208ENST00000538333 PDIA5Q14554 519 aa15.73■□□□□ 0.11
LIMK1-208ENST00000538333 CERKLQ49MI3 558 aaPredicted RBP15.73■□□□□ 0.11
LIMK1-208ENST00000538333 SIAH1Q8IUQ4 282 aa15.73■□□□□ 0.11
LIMK1-208ENST00000538333 CALML4Q96GE6 196 aa15.73■□□□□ 0.11
LIMK1-208ENST00000538333 PNMA5Q96PV4 448 aa15.73■□□□□ 0.11
LIMK1-208ENST00000538333 DESI2Q9BSY9 194 aa15.73■□□□□ 0.11
LIMK1-208ENST00000538333 LRWD1Q9UFC0 647 aa15.73■□□□□ 0.11
LIMK1-208ENST00000538333 PSME4Q14997 1843 aa15.72■□□□□ 0.11
LIMK1-208ENST00000538333 EEF1GP26641 437 aaKnown RBP15.72■□□□□ 0.11
LIMK1-208ENST00000538333 CHRNA5P30532 468 aa15.72■□□□□ 0.11
LIMK1-208ENST00000538333 TNNI2P48788 182 aa15.72■□□□□ 0.11
LIMK1-208ENST00000538333 AMPD3Q01432 767 aa15.72■□□□□ 0.11
LIMK1-208ENST00000538333 STK4Q13043 487 aa15.72■□□□□ 0.11
LIMK1-208ENST00000538333 COBLL1Q53SF7 1204 aa15.72■□□□□ 0.11
LIMK1-208ENST00000538333 DUSP9Q99956 384 aaKnown RBP15.72■□□□□ 0.11
LIMK1-208ENST00000538333 CCDC94Q9BW85 323 aaPredicted RBP15.72■□□□□ 0.11
LIMK1-208ENST00000538333 KANSL2Q9H9L4 492 aa15.72■□□□□ 0.11
LIMK1-208ENST00000538333 STK17AQ9UEE5 414 aa15.72■□□□□ 0.11
LIMK1-208ENST00000538333 ATF5Q9Y2D1 282 aaPredicted RBP15.72■□□□□ 0.11
LIMK1-208ENST00000538333 RNF225M0QZC1 329 aaPredicted RBP15.72■□□□□ 0.11
LIMK1-208ENST00000538333 RBM5P52756 815 aaKnown RBP eCLIP15.72■□□□□ 0.11
LIMK1-208ENST00000538333 MRPL12P52815 198 aaKnown RBP15.72■□□□□ 0.11
LIMK1-208ENST00000538333 ASIC1P78348 528 aa15.72■□□□□ 0.11
LIMK1-208ENST00000538333 PDE4DQ08499 809 aa15.72■□□□□ 0.11
LIMK1-208ENST00000538333 ZNF507Q8TCN5 953 aa15.72■□□□□ 0.11
LIMK1-208ENST00000538333 DCAF4Q8WV16 495 aa15.72■□□□□ 0.11
LIMK1-208ENST00000538333 CNKSR1Q969H4 720 aa15.72■□□□□ 0.11
LIMK1-208ENST00000538333 MRPL44Q9H9J2 332 aaKnown RBP15.72■□□□□ 0.11
LIMK1-208ENST00000538333 EXOC1Q9NV70 894 aa15.72■□□□□ 0.11
LIMK1-208ENST00000538333 ADGRG1Q9Y653 693 aa15.72■□□□□ 0.11
LIMK1-208ENST00000538333 POTEMA6NI47 508 aa15.71■□□□□ 0.11
LIMK1-208ENST00000538333 LGALS16A8MUM7 142 aa15.71■□□□□ 0.11
LIMK1-208ENST00000538333 FCER1AP12319 257 aa15.71■□□□□ 0.11
LIMK1-208ENST00000538333 CCNE1P24864 410 aa15.71■□□□□ 0.11
LIMK1-208ENST00000538333 TRIM14Q14142 442 aa15.71■□□□□ 0.11
LIMK1-208ENST00000538333 AOC3Q16853 763 aa15.71■□□□□ 0.11
LIMK1-208ENST00000538333 TMEM266Q2M3C6 531 aa15.71■□□□□ 0.11
LIMK1-208ENST00000538333 LRRN4CLQ8ND94 238 aa15.71■□□□□ 0.11
LIMK1-208ENST00000538333 HAS1Q92839 578 aa15.71■□□□□ 0.11
LIMK1-208ENST00000538333 TRIM47Q96LD4 638 aa15.71■□□□□ 0.11
LIMK1-208ENST00000538333 WDR24Q96S15 920 aa15.71■□□□□ 0.11
LIMK1-208ENST00000538333 SRRTQ9BXP5 876 aaKnown RBP15.71■□□□□ 0.11
LIMK1-208ENST00000538333 GTPBP4Q9BZE4 634 aaKnown RBP15.71■□□□□ 0.11
LIMK1-208ENST00000538333 PSTPIP2Q9H939 334 aa15.71■□□□□ 0.11
LIMK1-208ENST00000538333 ZNF219Q9P2Y4 722 aaPredicted RBP15.71■□□□□ 0.11
LIMK1-208ENST00000538333 ATRNL1Q5VV63 1379 aa15.71■□□□□ 0.11
LIMK1-208ENST00000538333 CCDC175P0C221 793 aa15.7■□□□□ 0.1
LIMK1-208ENST00000538333 UBXN1Q04323 297 aa15.7■□□□□ 0.1
LIMK1-208ENST00000538333 QRICH1Q2TAL8 776 aa15.7■□□□□ 0.1
LIMK1-208ENST00000538333 KIAA0895Q8NCT3 520 aa15.7■□□□□ 0.1
LIMK1-208ENST00000538333 NOC3LQ8WTT2 800 aaKnown RBP15.7■□□□□ 0.1
LIMK1-208ENST00000538333 P2RX5Q93086 422 aa15.7■□□□□ 0.1
LIMK1-208ENST00000538333 CCDC47Q96A33 483 aaKnown RBP15.7■□□□□ 0.1
LIMK1-208ENST00000538333 NUDT12Q9BQG2 462 aa15.7■□□□□ 0.1
LIMK1-208ENST00000538333 RAB34Q9BZG1 259 aa15.7■□□□□ 0.1
LIMK1-208ENST00000538333 ABHD10Q9NUJ1 306 aa15.7■□□□□ 0.1
LIMK1-208ENST00000538333 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.7■□□□□ 0.1
LIMK1-208ENST00000538333 V9GYY5 206 aaPredicted RBP15.7■□□□□ 0.1
LIMK1-208ENST00000538333 MYMKA6NI61 221 aa15.7■□□□□ 0.1
LIMK1-208ENST00000538333 PPP1R2P41236 205 aa15.7■□□□□ 0.1
LIMK1-208ENST00000538333 SLC1A4P43007 532 aa15.7■□□□□ 0.1
LIMK1-208ENST00000538333 SEPT2Q15019 361 aa15.7■□□□□ 0.1
LIMK1-208ENST00000538333 TMEM119Q4V9L6 283 aa15.7■□□□□ 0.1
LIMK1-208ENST00000538333 SLFN13Q68D06 897 aa15.7■□□□□ 0.1
LIMK1-208ENST00000538333 SV2BQ7L1I2 683 aa15.7■□□□□ 0.1
LIMK1-208ENST00000538333 LARP4BQ92615 738 aaKnown RBP15.7■□□□□ 0.1
LIMK1-208ENST00000538333 CGNQ9P2M7 1197 aaKnown RBP15.7■□□□□ 0.1
LIMK1-208ENST00000538333 DDX25Q9UHL0 483 aaKnown RBP15.7■□□□□ 0.1
LIMK1-208ENST00000538333 COL2A1P02458 1487 aaPredicted RBP15.69■□□□□ 0.1
LIMK1-208ENST00000538333 A0A1W2PQC6 194 aa15.69■□□□□ 0.1
LIMK1-208ENST00000538333 TPM1P09493 284 aa15.69■□□□□ 0.1
LIMK1-208ENST00000538333 GCFC2P16383 781 aaKnown RBP15.69■□□□□ 0.1
LIMK1-208ENST00000538333 MCM6Q14566 821 aa15.69■□□□□ 0.1
LIMK1-208ENST00000538333 ELF2Q15723 593 aa15.69■□□□□ 0.1
LIMK1-208ENST00000538333 ANKRD40Q6AI12 368 aa15.69■□□□□ 0.1
LIMK1-208ENST00000538333 TMEM179Q6ZVK1 233 aa15.69■□□□□ 0.1
LIMK1-208ENST00000538333 CREBRFQ8IUR6 639 aa15.69■□□□□ 0.1
LIMK1-208ENST00000538333 ZSCAN29Q8IWY8 852 aaPredicted RBP15.69■□□□□ 0.1
LIMK1-208ENST00000538333 MB21D1Q8N884 522 aa15.69■□□□□ 0.1
LIMK1-208ENST00000538333 KIFC2Q96AC6 838 aa15.69■□□□□ 0.1
LIMK1-208ENST00000538333 BICDL2A1A5D9 508 aa15.69■□□□□ 0.1
LIMK1-208ENST00000538333 YDJCA8MPS7 323 aa15.69■□□□□ 0.1
LIMK1-208ENST00000538333 ERVK-24P63145 666 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms