RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 RBM47A0AV96 593 aaKnown RBP9.78□□□□□ -0.84
SPARC-208ENST00000538026 DNM1LO00429 736 aa9.78□□□□□ -0.84
SPARC-208ENST00000538026 ZBTB5O15062 677 aa9.78□□□□□ -0.84
SPARC-208ENST00000538026 MSCO60682 206 aa9.78□□□□□ -0.84
SPARC-208ENST00000538026 DDAH1O94760 285 aa9.78□□□□□ -0.84
SPARC-208ENST00000538026 SEC24BO95487 1268 aa9.78□□□□□ -0.84
SPARC-208ENST00000538026 SMPD1P17405 629 aa9.78□□□□□ -0.84
SPARC-208ENST00000538026 CALML3P27482 149 aa9.78□□□□□ -0.84
SPARC-208ENST00000538026 ADCYAP1R1P41586 468 aa9.78□□□□□ -0.84
SPARC-208ENST00000538026 ALDH5A1P51649 535 aaPredicted RBP9.78□□□□□ -0.84
SPARC-208ENST00000538026 NKX3-2P78367 333 aa9.78□□□□□ -0.84
SPARC-208ENST00000538026 RNF207Q6ZRF8 634 aa9.78□□□□□ -0.84
SPARC-208ENST00000538026 EEPD1Q7L9B9 569 aa9.78□□□□□ -0.84
SPARC-208ENST00000538026 CATIPQ7Z7H3 387 aa9.78□□□□□ -0.84
SPARC-208ENST00000538026 FBXO11Q86XK2 927 aa9.78□□□□□ -0.84
SPARC-208ENST00000538026 FBXO16Q8IX29 292 aaPredicted RBP9.78□□□□□ -0.84
SPARC-208ENST00000538026 NUP133Q8WUM0 1156 aa9.78□□□□□ -0.84
SPARC-208ENST00000538026 DPF3Q92784 378 aa9.78□□□□□ -0.84
SPARC-208ENST00000538026 SENP6Q9GZR1 1112 aaPredicted RBP9.78□□□□□ -0.84
SPARC-208ENST00000538026 UPF3AQ9H1J1 476 aaKnown RBP9.78□□□□□ -0.84
SPARC-208ENST00000538026 ZHX1Q9UKY1 873 aaPredicted RBP9.78□□□□□ -0.84
SPARC-208ENST00000538026 ABCB11O95342 1321 aa9.78□□□□□ -0.84
SPARC-208ENST00000538026 SYNRGQ9UMZ2 1314 aa9.78□□□□□ -0.84
SPARC-208ENST00000538026 MYH7BA7E2Y1 1941 aa9.78□□□□□ -0.84
SPARC-208ENST00000538026 PNMA6FA0A0J9YX94 578 aa9.77□□□□□ -0.85
SPARC-208ENST00000538026 ERICH2A1L162 156 aa9.77□□□□□ -0.85
SPARC-208ENST00000538026 PTPDC1A2A3K4 754 aa9.77□□□□□ -0.85
SPARC-208ENST00000538026 DUSP11O75319 330 aaKnown RBP9.77□□□□□ -0.85
SPARC-208ENST00000538026 RARBP10826 455 aa9.77□□□□□ -0.85
SPARC-208ENST00000538026 AKR1A1P14550 325 aa9.77□□□□□ -0.85
SPARC-208ENST00000538026 HSD17B4P51659 736 aa9.77□□□□□ -0.85
SPARC-208ENST00000538026 ATN1P54259 1190 aaPredicted RBP9.77□□□□□ -0.85
SPARC-208ENST00000538026 SART3Q15020 963 aaKnown RBP9.77□□□□□ -0.85
SPARC-208ENST00000538026 SNX17Q15036 470 aa9.77□□□□□ -0.85
SPARC-208ENST00000538026 RNF20Q5VTR2 975 aa9.77□□□□□ -0.85
SPARC-208ENST00000538026 APOA5Q6Q788 366 aa9.77□□□□□ -0.85
SPARC-208ENST00000538026 CASC1Q6TDU7 716 aa9.77□□□□□ -0.85
SPARC-208ENST00000538026 HOMER1Q86YM7 354 aa9.77□□□□□ -0.85
SPARC-208ENST00000538026 PIBF1Q8WXW3 757 aa9.77□□□□□ -0.85
SPARC-208ENST00000538026 FERMT2Q96AC1 680 aa9.77□□□□□ -0.85
SPARC-208ENST00000538026 JAKMIP1Q96N16 626 aaKnown RBP9.77□□□□□ -0.85
SPARC-208ENST00000538026 SPZ1Q9BXG8 430 aa9.77□□□□□ -0.85
SPARC-208ENST00000538026 AMNQ9BXJ7 453 aa9.77□□□□□ -0.85
SPARC-208ENST00000538026 AGXT2Q9BYV1 514 aa9.77□□□□□ -0.85
SPARC-208ENST00000538026 XPNPEP3Q9NQH7 507 aa9.77□□□□□ -0.85
SPARC-208ENST00000538026 FAM184BQ9ULE4 1060 aa9.77□□□□□ -0.85
SPARC-208ENST00000538026 CNPY2Q9Y2B0 182 aa9.77□□□□□ -0.85
SPARC-208ENST00000538026 PCDHA1Q9Y5I3 950 aa9.77□□□□□ -0.85
SPARC-208ENST00000538026 REV3LO60673 3130 aa9.77□□□□□ -0.85
SPARC-208ENST00000538026 ASB14A6NK59 587 aa9.76□□□□□ -0.85
SPARC-208ENST00000538026 DHX16O60231 1041 aaKnown RBP9.76□□□□□ -0.85
SPARC-208ENST00000538026 RGS20O76081 388 aa9.76□□□□□ -0.85
SPARC-208ENST00000538026 ARIH2O95376 493 aa9.76□□□□□ -0.85
SPARC-208ENST00000538026 RPS6KB1P23443 525 aa9.76□□□□□ -0.85
SPARC-208ENST00000538026 SMARCA1P28370 1054 aa9.76□□□□□ -0.85
SPARC-208ENST00000538026 CDC27P30260 824 aa9.76□□□□□ -0.85
SPARC-208ENST00000538026 HOXA13P31271 388 aaPredicted RBP9.76□□□□□ -0.85
SPARC-208ENST00000538026 GJA9P57773 515 aa9.76□□□□□ -0.85
SPARC-208ENST00000538026 TYW1BQ6NUM6 668 aa9.76□□□□□ -0.85
SPARC-208ENST00000538026 SLC39A5Q6ZMH5 540 aa9.76□□□□□ -0.85
SPARC-208ENST00000538026 TMTC3Q6ZXV5 915 aa9.76□□□□□ -0.85
SPARC-208ENST00000538026 C7orf61Q8IZ16 206 aa9.76□□□□□ -0.85
SPARC-208ENST00000538026 TMTC2Q8N394 836 aa9.76□□□□□ -0.85
SPARC-208ENST00000538026 FBXL16Q8N461 479 aa9.76□□□□□ -0.85
SPARC-208ENST00000538026 CCDC82Q8N4S0 544 aa9.76□□□□□ -0.85
SPARC-208ENST00000538026 FANCBQ8NB91 859 aa9.76□□□□□ -0.85
SPARC-208ENST00000538026 ARRDC4Q8NCT1 418 aa9.76□□□□□ -0.85
SPARC-208ENST00000538026 IL31RAQ8NI17 732 aa9.76□□□□□ -0.85
SPARC-208ENST00000538026 HTATIP2Q9BUP3 242 aa9.76□□□□□ -0.85
SPARC-208ENST00000538026 PHF24Q9UPV7 400 aa9.76□□□□□ -0.85
SPARC-208ENST00000538026 MRPL11Q9Y3B7 192 aaKnown RBP9.76□□□□□ -0.85
SPARC-208ENST00000538026 GRIN2DO15399 1336 aa9.76□□□□□ -0.85
SPARC-208ENST00000538026 CCDC69A6NI79 296 aa9.75□□□□□ -0.85
SPARC-208ENST00000538026 ADAMTS3O15072 1205 aa9.75□□□□□ -0.85
SPARC-208ENST00000538026 EVI5O60447 810 aa9.75□□□□□ -0.85
SPARC-208ENST00000538026 ADD1P35611 737 aaKnown RBP9.75□□□□□ -0.85
SPARC-208ENST00000538026 BEX3Q00994 111 aa9.75□□□□□ -0.85
SPARC-208ENST00000538026 TNFAIP2Q03169 654 aa9.75□□□□□ -0.85
SPARC-208ENST00000538026 APOBRQ0VD83 1088 aa9.75□□□□□ -0.85
SPARC-208ENST00000538026 TOB2Q14106 344 aaPredicted RBP9.75□□□□□ -0.85
SPARC-208ENST00000538026 KCNA10Q16322 511 aa9.75□□□□□ -0.85
SPARC-208ENST00000538026 IQSEC1Q6DN90 963 aa9.75□□□□□ -0.85
SPARC-208ENST00000538026 CCDC62Q6P9F0 684 aa9.75□□□□□ -0.85
SPARC-208ENST00000538026 NFXL1Q6ZNB6 911 aa9.75□□□□□ -0.85
SPARC-208ENST00000538026 Q6ZUG5 572 aa9.75□□□□□ -0.85
SPARC-208ENST00000538026 MICU3Q86XE3 530 aa9.75□□□□□ -0.85
SPARC-208ENST00000538026 DNERQ8NFT8 737 aa9.75□□□□□ -0.85
SPARC-208ENST00000538026 COPS5Q92905 334 aa9.75□□□□□ -0.85
SPARC-208ENST00000538026 ZFP91Q96JP5 570 aaPredicted RBP9.75□□□□□ -0.85
SPARC-208ENST00000538026 ZSWIM6Q9HCJ5 1215 aa9.75□□□□□ -0.85
SPARC-208ENST00000538026 VTA1Q9NP79 307 aa9.75□□□□□ -0.85
SPARC-208ENST00000538026 PXMP2Q9NR77 195 aa9.75□□□□□ -0.85
SPARC-208ENST00000538026 PNMA2Q9UL42 364 aa9.75□□□□□ -0.85
SPARC-208ENST00000538026 ZMYND8Q9ULU4 1186 aaPredicted RBP9.75□□□□□ -0.85
SPARC-208ENST00000538026 COLQQ9Y215 455 aaPredicted RBP9.75□□□□□ -0.85
SPARC-208ENST00000538026 SLC12A7Q9Y666 1083 aa9.75□□□□□ -0.85
SPARC-208ENST00000538026 UNC80Q8N2C7 3258 aa9.75□□□□□ -0.85
SPARC-208ENST00000538026 DOCK5Q9H7D0 1870 aa9.74□□□□□ -0.85
SPARC-208ENST00000538026 SCN10AQ9Y5Y9 1956 aa9.74□□□□□ -0.85
SPARC-208ENST00000538026 LOC102724159A0A0B4J2E5 919 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms