RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 MRVI1Q9Y6F6 885 aa13.37□□□□□ -0.27
SPARC-207ENST00000537849 DDX49Q9Y6V7 483 aaKnown RBP13.37□□□□□ -0.27
SPARC-207ENST00000537849 TESPA1A2RU30 521 aaPredicted RBP13.36□□□□□ -0.27
SPARC-207ENST00000537849 NFIBO00712 420 aa13.36□□□□□ -0.27
SPARC-207ENST00000537849 CNMDO75829 334 aa13.36□□□□□ -0.27
SPARC-207ENST00000537849 BMP15O95972 392 aa13.36□□□□□ -0.27
SPARC-207ENST00000537849 CFBP00751 764 aa13.36□□□□□ -0.27
SPARC-207ENST00000537849 OSBPP22059 807 aa13.36□□□□□ -0.27
SPARC-207ENST00000537849 HOXA13P31271 388 aaPredicted RBP13.36□□□□□ -0.27
SPARC-207ENST00000537849 STAT3P40763 770 aa13.36□□□□□ -0.27
SPARC-207ENST00000537849 ME1P48163 572 aa13.36□□□□□ -0.27
SPARC-207ENST00000537849 HSD17B4P51659 736 aa13.36□□□□□ -0.27
SPARC-207ENST00000537849 USP11P51784 963 aa13.36□□□□□ -0.27
SPARC-207ENST00000537849 HERVK_113P62684 666 aa13.36□□□□□ -0.27
SPARC-207ENST00000537849 ATP2C1P98194 919 aaPredicted RBP13.36□□□□□ -0.27
SPARC-207ENST00000537849 MKRN3Q13064 507 aaKnown RBP13.36□□□□□ -0.27
SPARC-207ENST00000537849 PABPC4Q13310 644 aaKnown RBP eCLIP13.36□□□□□ -0.27
SPARC-207ENST00000537849 AP3B2Q13367 1082 aa13.36□□□□□ -0.27
SPARC-207ENST00000537849 TKFCQ3LXA3 575 aa13.36□□□□□ -0.27
SPARC-207ENST00000537849 NEK8Q86SG6 692 aa13.36□□□□□ -0.27
SPARC-207ENST00000537849 MB21D1Q8N884 522 aa13.36□□□□□ -0.27
SPARC-207ENST00000537849 ANO3Q9BYT9 981 aa13.36□□□□□ -0.27
SPARC-207ENST00000537849 MAP3K20Q9NYL2 800 aaKnown RBP13.36□□□□□ -0.27
SPARC-207ENST00000537849 RBPJLQ9UBG7 517 aa13.36□□□□□ -0.27
SPARC-207ENST00000537849 FBXO2Q9UK22 296 aaPredicted RBP13.36□□□□□ -0.27
SPARC-207ENST00000537849 CEP131Q9UPN4 1083 aa13.36□□□□□ -0.27
SPARC-207ENST00000537849 SRPRBQ9Y5M8 271 aaKnown RBP13.36□□□□□ -0.27
SPARC-207ENST00000537849 CYP3A7-CYP3A51PA0A087WV96 503 aa13.35□□□□□ -0.27
SPARC-207ENST00000537849 CCL15-CCL14A0A0B4J2E2 113 aa13.35□□□□□ -0.27
SPARC-207ENST00000537849 A0A1W2PQ27 194 aa13.35□□□□□ -0.27
SPARC-207ENST00000537849 A0A1W2PQ64 194 aa13.35□□□□□ -0.27
SPARC-207ENST00000537849 A0A1W2PQD8 194 aa13.35□□□□□ -0.27
SPARC-207ENST00000537849 BTBD19C9JJ37 291 aa13.35□□□□□ -0.27
SPARC-207ENST00000537849 PEX10O60683 326 aa13.35□□□□□ -0.27
SPARC-207ENST00000537849 CUTAO60888 179 aa13.35□□□□□ -0.27
SPARC-207ENST00000537849 TOMM70O94826 608 aa13.35□□□□□ -0.27
SPARC-207ENST00000537849 MBD3O95983 291 aa13.35□□□□□ -0.27
SPARC-207ENST00000537849 LIG1P18858 919 aa13.35□□□□□ -0.27
SPARC-207ENST00000537849 CYP3A7P24462 503 aa13.35□□□□□ -0.27
SPARC-207ENST00000537849 MCM7P33993 719 aa13.35□□□□□ -0.27
SPARC-207ENST00000537849 IRX3P78415 501 aaPredicted RBP13.35□□□□□ -0.27
SPARC-207ENST00000537849 IL17AQ16552 155 aa13.35□□□□□ -0.27
SPARC-207ENST00000537849 CCL15Q16663 113 aa13.35□□□□□ -0.27
SPARC-207ENST00000537849 LETM2Q2VYF4 491 aa13.35□□□□□ -0.27
SPARC-207ENST00000537849 SNRNP48Q6IEG0 339 aaKnown RBP13.35□□□□□ -0.27
SPARC-207ENST00000537849 ANKRD23Q86SG2 305 aa13.35□□□□□ -0.27
SPARC-207ENST00000537849 MCF2L2Q86YR7 1114 aa13.35□□□□□ -0.27
SPARC-207ENST00000537849 RASAL3Q86YV0 1011 aa13.35□□□□□ -0.27
SPARC-207ENST00000537849 MBOAT7Q96N66 472 aa13.35□□□□□ -0.27
SPARC-207ENST00000537849 CLIC6Q96NY7 704 aa13.35□□□□□ -0.27
SPARC-207ENST00000537849 PTPN18Q99952 460 aa13.35□□□□□ -0.27
SPARC-207ENST00000537849 TEX13BQ9BXU2 312 aa13.35□□□□□ -0.27
SPARC-207ENST00000537849 TMEM60Q9H2L4 133 aa13.35□□□□□ -0.27
SPARC-207ENST00000537849 SLC45A1Q9Y2W3 748 aa13.35□□□□□ -0.27
SPARC-207ENST00000537849 TLL2Q9Y6L7 1015 aa13.35□□□□□ -0.27
SPARC-207ENST00000537849 ZNFX1Q9P2E3 1918 aaKnown RBP13.35□□□□□ -0.27
SPARC-207ENST00000537849 A0A0G2JMZ2 1700 aa13.34□□□□□ -0.27
SPARC-207ENST00000537849 GOLGA6L4A6NEF3 574 aa13.34□□□□□ -0.27
SPARC-207ENST00000537849 CYP3A4P08684 503 aa13.34□□□□□ -0.27
SPARC-207ENST00000537849 CMA1P23946 247 aa13.34□□□□□ -0.27
SPARC-207ENST00000537849 SREBF1P36956 1147 aa13.34□□□□□ -0.27
SPARC-207ENST00000537849 ZNF157P51786 506 aaPredicted RBP13.34□□□□□ -0.27
SPARC-207ENST00000537849 GRIN1Q05586 938 aa13.34□□□□□ -0.27
SPARC-207ENST00000537849 ORC2Q13416 577 aaPredicted RBP13.34□□□□□ -0.27
SPARC-207ENST00000537849 Q3C1V9 767 aa13.34□□□□□ -0.27
SPARC-207ENST00000537849 TPRNQ4KMQ1 711 aa13.34□□□□□ -0.27
SPARC-207ENST00000537849 PPP4R3AQ6IN85 833 aa13.34□□□□□ -0.27
SPARC-207ENST00000537849 RGMBQ6NW40 437 aa13.34□□□□□ -0.27
SPARC-207ENST00000537849 FCHSD1Q86WN1 690 aa13.34□□□□□ -0.27
SPARC-207ENST00000537849 RIOX2Q8IUF8 465 aa13.34□□□□□ -0.27
SPARC-207ENST00000537849 CCAR1Q8IX12 1150 aaKnown RBP13.34□□□□□ -0.27
SPARC-207ENST00000537849 JMYQ8N9B5 988 aa13.34□□□□□ -0.27
SPARC-207ENST00000537849 KRI1Q8N9T8 703 aaKnown RBP13.34□□□□□ -0.27
SPARC-207ENST00000537849 ZNF579Q8NAF0 562 aaKnown RBP13.34□□□□□ -0.27
SPARC-207ENST00000537849 ENGASEQ8NFI3 743 aa13.34□□□□□ -0.27
SPARC-207ENST00000537849 SYTL5Q8TDW5 730 aaPredicted RBP13.34□□□□□ -0.27
SPARC-207ENST00000537849 MAF1Q9H063 256 aa13.34□□□□□ -0.27
SPARC-207ENST00000537849 RNF146Q9NTX7 359 aa13.34□□□□□ -0.27
SPARC-207ENST00000537849 COL20A1Q9P218 1284 aa13.34□□□□□ -0.27
SPARC-207ENST00000537849 RABGAP1Q9Y3P9 1069 aa13.34□□□□□ -0.27
SPARC-207ENST00000537849 FAM237AA0A1B0GTK4 181 aa13.33□□□□□ -0.28
SPARC-207ENST00000537849 SPDYE3A6NKU9 549 aa13.33□□□□□ -0.28
SPARC-207ENST00000537849 PDHXO00330 501 aa13.33□□□□□ -0.28
SPARC-207ENST00000537849 CCNT1O60563 726 aaKnown RBP13.33□□□□□ -0.28
SPARC-207ENST00000537849 CIITAP33076 1130 aa13.33□□□□□ -0.28
SPARC-207ENST00000537849 ARHGAP4P98171 946 aa13.33□□□□□ -0.28
SPARC-207ENST00000537849 ARL6IP4Q66PJ3 421 aaKnown RBP13.33□□□□□ -0.28
SPARC-207ENST00000537849 SHC4Q6S5L8 630 aa13.33□□□□□ -0.28
SPARC-207ENST00000537849 FERMT2Q96AC1 680 aa13.33□□□□□ -0.28
SPARC-207ENST00000537849 MTMR9Q96QG7 549 aa13.33□□□□□ -0.28
SPARC-207ENST00000537849 GOLPH3LQ9H4A5 285 aa13.33□□□□□ -0.28
SPARC-207ENST00000537849 TXNRD2Q9NNW7 524 aa13.33□□□□□ -0.28
SPARC-207ENST00000537849 HOMER2Q9NSB8 354 aa13.33□□□□□ -0.28
SPARC-207ENST00000537849 TMEM88BA6NKF7 163 aa13.32□□□□□ -0.28
SPARC-207ENST00000537849 FAM155AB1AL88 458 aaPredicted RBP13.32□□□□□ -0.28
SPARC-207ENST00000537849 TDP2O95551 362 aa13.32□□□□□ -0.28
SPARC-207ENST00000537849 RPS6P62753 249 aaKnown RBP13.32□□□□□ -0.28
SPARC-207ENST00000537849 FSTL1Q12841 308 aa13.32□□□□□ -0.28
SPARC-207ENST00000537849 SNW1Q13573 536 aaKnown RBP13.32□□□□□ -0.28
SPARC-207ENST00000537849 BAATQ14032 418 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms