RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 ATP1A2P50993 1020 aa11.62□□□□□ -0.55
CLIP1-209ENST00000537178 PNOCQ13519 176 aa11.62□□□□□ -0.55
CLIP1-209ENST00000537178 CABLES1Q8TDN4 633 aa11.62□□□□□ -0.55
CLIP1-209ENST00000537178 C19orf44Q9H6X5 657 aa11.62□□□□□ -0.55
CLIP1-209ENST00000537178 ZNF408Q9H9D4 720 aa11.62□□□□□ -0.55
CLIP1-209ENST00000537178 PRDM4Q9UKN5 801 aa11.62□□□□□ -0.55
CLIP1-209ENST00000537178 COL4A3BPQ9Y5P4 624 aa11.62□□□□□ -0.55
CLIP1-209ENST00000537178 ZNF532Q9HCE3 1301 aa11.62□□□□□ -0.55
CLIP1-209ENST00000537178 LRRD1A4D1F6 860 aa11.62□□□□□ -0.55
CLIP1-209ENST00000537178 CLTAP09496 248 aa11.62□□□□□ -0.55
CLIP1-209ENST00000537178 BPIFB4P59827 614 aa11.62□□□□□ -0.55
CLIP1-209ENST00000537178 TMTC4Q5T4D3 741 aa11.62□□□□□ -0.55
CLIP1-209ENST00000537178 ZNF654Q8IZM8 581 aa11.62□□□□□ -0.55
CLIP1-209ENST00000537178 CXorf38Q8TB03 319 aa11.62□□□□□ -0.55
CLIP1-209ENST00000537178 PLEKHA4Q9H4M7 779 aa11.62□□□□□ -0.55
CLIP1-209ENST00000537178 STK32BQ9NY57 414 aa11.62□□□□□ -0.55
CLIP1-209ENST00000537178 CCNL1Q9UK58 526 aaPredicted RBP11.62□□□□□ -0.55
CLIP1-209ENST00000537178 PDE1BQ01064 536 aa11.62□□□□□ -0.55
CLIP1-209ENST00000537178 ITKQ08881 620 aa11.62□□□□□ -0.55
CLIP1-209ENST00000537178 RINT1Q6NUQ1 792 aa11.62□□□□□ -0.55
CLIP1-209ENST00000537178 TRIM42Q8IWZ5 723 aa11.62□□□□□ -0.55
CLIP1-209ENST00000537178 FAM178BQ8IXR5 827 aa11.62□□□□□ -0.55
CLIP1-209ENST00000537178 PCDHA12Q9UN75 941 aa11.62□□□□□ -0.55
CLIP1-209ENST00000537178 CPSF1Q10570 1443 aaKnown RBP11.61□□□□□ -0.55
CLIP1-209ENST00000537178 PFKFB1P16118 471 aa11.61□□□□□ -0.55
CLIP1-209ENST00000537178 IL9RQ01113 521 aa11.61□□□□□ -0.55
CLIP1-209ENST00000537178 ZNF274Q96GC6 653 aaPredicted RBP11.61□□□□□ -0.55
CLIP1-209ENST00000537178 DRC3Q9H069 523 aa11.61□□□□□ -0.55
CLIP1-209ENST00000537178 MLXIPQ9HAP2 919 aa11.61□□□□□ -0.55
CLIP1-209ENST00000537178 BCL2L12Q9HB09 334 aa11.61□□□□□ -0.55
CLIP1-209ENST00000537178 PPP2R2CQ9Y2T4 447 aa11.61□□□□□ -0.55
CLIP1-209ENST00000537178 JAK2O60674 1132 aa11.61□□□□□ -0.55
CLIP1-209ENST00000537178 GADD45BO75293 160 aaPredicted RBP11.61□□□□□ -0.55
CLIP1-209ENST00000537178 STX1BP61266 288 aa11.61□□□□□ -0.55
CLIP1-209ENST00000537178 DLGAP5Q15398 846 aa11.61□□□□□ -0.55
CLIP1-209ENST00000537178 FAM102BQ5T8I3 360 aa11.61□□□□□ -0.55
CLIP1-209ENST00000537178 G2E3Q7L622 706 aa11.61□□□□□ -0.55
CLIP1-209ENST00000537178 NOSTRINQ8IVI9 506 aa11.61□□□□□ -0.55
CLIP1-209ENST00000537178 BLIDQ8IZY5 108 aa11.61□□□□□ -0.55
CLIP1-209ENST00000537178 BBS5Q8N3I7 341 aa11.61□□□□□ -0.55
CLIP1-209ENST00000537178 OTUD7AQ8TE49 926 aaPredicted RBP11.61□□□□□ -0.55
CLIP1-209ENST00000537178 SMCR8Q8TEV9 937 aaPredicted RBP11.61□□□□□ -0.55
CLIP1-209ENST00000537178 POMGNT1Q8WZA1 660 aa11.61□□□□□ -0.55
CLIP1-209ENST00000537178 LMBRD1Q9NUN5 540 aa11.61□□□□□ -0.55
CLIP1-209ENST00000537178 MAD1L1Q9Y6D9 718 aa11.61□□□□□ -0.55
CLIP1-209ENST00000537178 INHBAP08476 426 aa11.61□□□□□ -0.55
CLIP1-209ENST00000537178 TMEM191BP0C7N4 346 aa11.61□□□□□ -0.55
CLIP1-209ENST00000537178 NSFP46459 744 aaKnown RBP11.61□□□□□ -0.55
CLIP1-209ENST00000537178 SESN3P58005 492 aa11.61□□□□□ -0.55
CLIP1-209ENST00000537178 SLFN12Q8IYM2 578 aa11.61□□□□□ -0.55
CLIP1-209ENST00000537178 CCDC124Q96CT7 223 aaKnown RBP11.61□□□□□ -0.55
CLIP1-209ENST00000537178 IFT122Q9HBG6 1241 aa11.61□□□□□ -0.55
CLIP1-209ENST00000537178 E7EWF7 191 aa11.61□□□□□ -0.55
CLIP1-209ENST00000537178 S100BP04271 92 aaPredicted RBP11.61□□□□□ -0.55
CLIP1-209ENST00000537178 YWHAGP61981 247 aaKnown RBP eCLIP11.61□□□□□ -0.55
CLIP1-209ENST00000537178 GALNT17Q6IS24 598 aa11.61□□□□□ -0.55
CLIP1-209ENST00000537178 MMS19Q96T76 1030 aa11.61□□□□□ -0.55
CLIP1-209ENST00000537178 BEGAINQ9BUH8 593 aa11.61□□□□□ -0.55
CLIP1-209ENST00000537178 TPCN1Q9ULQ1 816 aa11.61□□□□□ -0.55
CLIP1-209ENST00000537178 H0YIN7 160 aa11.6□□□□□ -0.55
CLIP1-209ENST00000537178 GTPBP6O43824 516 aaPredicted RBP11.6□□□□□ -0.55
CLIP1-209ENST00000537178 ESRRGP62508 458 aa11.6□□□□□ -0.55
CLIP1-209ENST00000537178 ANKRD20A4Q4UJ75 823 aa11.6□□□□□ -0.55
CLIP1-209ENST00000537178 ANKRD20A8PQ5CZ79 823 aa11.6□□□□□ -0.55
CLIP1-209ENST00000537178 XKR9Q5GH70 373 aa11.6□□□□□ -0.55
CLIP1-209ENST00000537178 ANKRD20A2Q5SQ80 823 aa11.6□□□□□ -0.55
CLIP1-209ENST00000537178 ANKRD20A1Q5TYW2 823 aa11.6□□□□□ -0.55
CLIP1-209ENST00000537178 CAPN12Q6ZSI9 719 aa11.6□□□□□ -0.55
CLIP1-209ENST00000537178 LRRC43Q8N309 656 aa11.6□□□□□ -0.55
CLIP1-209ENST00000537178 PPM1KQ8N3J5 372 aa11.6□□□□□ -0.55
CLIP1-209ENST00000537178 NME8Q8N427 588 aa11.6□□□□□ -0.55
CLIP1-209ENST00000537178 EPS15L1Q9UBC2 864 aa11.6□□□□□ -0.55
CLIP1-209ENST00000537178 BRD1O95696 1058 aa11.6□□□□□ -0.55
CLIP1-209ENST00000537178 HOXC9P31274 260 aa11.6□□□□□ -0.55
CLIP1-209ENST00000537178 ECE1P42892 770 aa11.6□□□□□ -0.55
CLIP1-209ENST00000537178 TNFAIP1Q13829 316 aa11.6□□□□□ -0.55
CLIP1-209ENST00000537178 METTL13Q8N6R0 699 aa11.6□□□□□ -0.55
CLIP1-209ENST00000537178 KLHDC4Q8TBB5 520 aa11.6□□□□□ -0.55
CLIP1-209ENST00000537178 TGFBRAP1Q8WUH2 860 aa11.6□□□□□ -0.55
CLIP1-209ENST00000537178 ZNF594Q96JF6 807 aaPredicted RBP11.6□□□□□ -0.55
CLIP1-209ENST00000537178 EFHD1Q9BUP0 239 aa11.6□□□□□ -0.55
CLIP1-209ENST00000537178 FAM8A1Q9UBU6 413 aa11.6□□□□□ -0.55
CLIP1-209ENST00000537178 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.6□□□□□ -0.55
CLIP1-209ENST00000537178 BZW2Q9Y6E2 419 aaKnown RBP11.6□□□□□ -0.55
CLIP1-209ENST00000537178 KIF24Q5T7B8 1368 aa11.6□□□□□ -0.55
CLIP1-209ENST00000537178 EIF3CLB5ME19 914 aaKnown RBP11.6□□□□□ -0.55
CLIP1-209ENST00000537178 ZAP70P43403 619 aa11.6□□□□□ -0.55
CLIP1-209ENST00000537178 LIG3P49916 1009 aa11.6□□□□□ -0.55
CLIP1-209ENST00000537178 FAM26FQ5R3K3 315 aa11.6□□□□□ -0.55
CLIP1-209ENST00000537178 AP1ARQ63HQ0 302 aa11.6□□□□□ -0.55
CLIP1-209ENST00000537178 C4orf50Q6ZRC1 276 aa11.6□□□□□ -0.55
CLIP1-209ENST00000537178 RAB44Q7Z6P3 723 aaPredicted RBP11.6□□□□□ -0.55
CLIP1-209ENST00000537178 MRFAP1L1Q96HT8 127 aa11.6□□□□□ -0.55
CLIP1-209ENST00000537178 EIF3CQ99613 913 aaKnown RBP11.6□□□□□ -0.55
CLIP1-209ENST00000537178 DESI2Q9BSY9 194 aa11.6□□□□□ -0.55
CLIP1-209ENST00000537178 INTS9Q9NV88 658 aaKnown RBP11.6□□□□□ -0.55
CLIP1-209ENST00000537178 ANAPC5Q9UJX4 755 aa11.6□□□□□ -0.55
CLIP1-209ENST00000537178 MRPL11Q9Y3B7 192 aaKnown RBP11.6□□□□□ -0.55
CLIP1-209ENST00000537178 FAM208AQ9UK61 1670 aaKnown RBP11.6□□□□□ -0.55
CLIP1-209ENST00000537178 PALM3A6NDB9 673 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms