RNA–Protein interactions for RNA: ENST00000536852.1

MAP3K4-208, Transcript of mitogen-activated protein kinase kinase kinase 4, human

TSL 2

Gene MAP3K4, Length 2,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MAP3K4-208	ENST00000536852	RETREG2	Q8NC44	543 aa		12.85	□□□□□ -0.35
MAP3K4-208	ENST00000536852	NOA1	Q8NC60	698 aa	Known RBP	12.85	□□□□□ -0.35
MAP3K4-208	ENST00000536852	RPGR	Q92834	1020 aa	Known RBP	12.85	□□□□□ -0.35
MAP3K4-208	ENST00000536852	CALML4	Q96GE6	196 aa		12.85	□□□□□ -0.35
MAP3K4-208	ENST00000536852	MMTAG2	Q9BU76	263 aa	Known RBP	12.85	□□□□□ -0.35
MAP3K4-208	ENST00000536852	NOC4L	Q9BVI4	516 aa	Known RBP	12.85	□□□□□ -0.35
MAP3K4-208	ENST00000536852	TTYH3	Q9C0H2	523 aa		12.85	□□□□□ -0.35
MAP3K4-208	ENST00000536852	UBA5	Q9GZZ9	404 aa		12.85	□□□□□ -0.35
MAP3K4-208	ENST00000536852	ABCB6	Q9NP58	842 aa		12.85	□□□□□ -0.35
MAP3K4-208	ENST00000536852	RASSF10	A6NK89	507 aa		12.85	□□□□□ -0.35
MAP3K4-208	ENST00000536852	IPO7	O95373	1038 aa	Known RBP	12.85	□□□□□ -0.35
MAP3K4-208	ENST00000536852	PLCG2	P16885	1265 aa		12.85	□□□□□ -0.35
MAP3K4-208	ENST00000536852	CYLC1	P35663	651 aa	Predicted RBP	12.85	□□□□□ -0.35
MAP3K4-208	ENST00000536852	VSNL1	P62760	191 aa		12.85	□□□□□ -0.35
MAP3K4-208	ENST00000536852	ST5	P78524	1137 aa		12.85	□□□□□ -0.35
MAP3K4-208	ENST00000536852	ZBED6	P86452	979 aa		12.85	□□□□□ -0.35
MAP3K4-208	ENST00000536852	CNNM4	Q6P4Q7	775 aa		12.85	□□□□□ -0.35
MAP3K4-208	ENST00000536852	HPS3	Q969F9	1004 aa		12.85	□□□□□ -0.35
MAP3K4-208	ENST00000536852	TMEM260	Q9NX78	707 aa		12.85	□□□□□ -0.35
MAP3K4-208	ENST00000536852	HDAC6	Q9UBN7	1215 aa		12.85	□□□□□ -0.35
MAP3K4-208	ENST00000536852	USP17L5	A8MUK1	530 aa		12.84	□□□□□ -0.35
MAP3K4-208	ENST00000536852		H3BQF6	201 aa		12.84	□□□□□ -0.35
MAP3K4-208	ENST00000536852	SMARCA1	P28370	1054 aa		12.84	□□□□□ -0.35
MAP3K4-208	ENST00000536852	TRAPPC11	Q7Z392	1133 aa		12.84	□□□□□ -0.35
MAP3K4-208	ENST00000536852	JAKMIP2	Q96AA8	810 aa		12.84	□□□□□ -0.35
MAP3K4-208	ENST00000536852	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	12.84	□□□□□ -0.35
MAP3K4-208	ENST00000536852	L1RE1	Q9UN81	338 aa		12.84	□□□□□ -0.35
MAP3K4-208	ENST00000536852	MYH1	P12882	1939 aa		12.84	□□□□□ -0.35
MAP3K4-208	ENST00000536852	BTAF1	O14981	1849 aa		12.84	□□□□□ -0.35
MAP3K4-208	ENST00000536852	KRT86	O43790	486 aa		12.84	□□□□□ -0.35
MAP3K4-208	ENST00000536852	GPS2	Q13227	327 aa		12.84	□□□□□ -0.35
MAP3K4-208	ENST00000536852	SV2B	Q7L1I2	683 aa		12.84	□□□□□ -0.35
MAP3K4-208	ENST00000536852	KIAA0895	Q8NCT3	520 aa		12.84	□□□□□ -0.35
MAP3K4-208	ENST00000536852	GBP3	Q9H0R5	595 aa		12.84	□□□□□ -0.35
MAP3K4-208	ENST00000536852	SUGCT	Q9HAC7	445 aa		12.84	□□□□□ -0.35
MAP3K4-208	ENST00000536852	PDE11A	Q9HCR9	933 aa		12.84	□□□□□ -0.35
MAP3K4-208	ENST00000536852	SLC39A2	Q9NP94	309 aa		12.84	□□□□□ -0.35
MAP3K4-208	ENST00000536852	ATP1A1	P05023	1023 aa	Known RBP	12.83	□□□□□ -0.36
MAP3K4-208	ENST00000536852	TUBB	P07437	444 aa		12.83	□□□□□ -0.36
MAP3K4-208	ENST00000536852	GYS2	P54840	703 aa		12.83	□□□□□ -0.36
MAP3K4-208	ENST00000536852	RHBDL3	P58872	404 aa		12.83	□□□□□ -0.36
MAP3K4-208	ENST00000536852	MIIP	Q5JXC2	388 aa		12.83	□□□□□ -0.36
MAP3K4-208	ENST00000536852	MFSD14B	Q5SR56	506 aa		12.83	□□□□□ -0.36
MAP3K4-208	ENST00000536852	FKBP15	Q5T1M5	1219 aa		12.83	□□□□□ -0.36
MAP3K4-208	ENST00000536852	CCDC170	Q8IYT3	715 aa		12.83	□□□□□ -0.36
MAP3K4-208	ENST00000536852	EHBP1	Q8NDI1	1231 aa		12.83	□□□□□ -0.36
MAP3K4-208	ENST00000536852	LRWD1	Q9UFC0	647 aa		12.83	□□□□□ -0.36
MAP3K4-208	ENST00000536852	GGA1	Q9UJY5	639 aa		12.83	□□□□□ -0.36
MAP3K4-208	ENST00000536852	SAR1B	Q9Y6B6	198 aa		12.83	□□□□□ -0.36
MAP3K4-208	ENST00000536852	DDX60L	Q5H9U9	1706 aa	Known RBP	12.83	□□□□□ -0.36
MAP3K4-208	ENST00000536852	FRMPD2	Q68DX3	1309 aa	Predicted RBP	12.83	□□□□□ -0.36
MAP3K4-208	ENST00000536852	ESYT2	A0FGR8	921 aa		12.83	□□□□□ -0.36
MAP3K4-208	ENST00000536852	IL1R1	P14778	569 aa		12.83	□□□□□ -0.36
MAP3K4-208	ENST00000536852	ATP2B4	P23634	1241 aa		12.83	□□□□□ -0.36
MAP3K4-208	ENST00000536852	ORC2	Q13416	577 aa	Predicted RBP	12.83	□□□□□ -0.36
MAP3K4-208	ENST00000536852	CALCRL	Q16602	461 aa		12.83	□□□□□ -0.36
MAP3K4-208	ENST00000536852	PRR5L	Q6MZQ0	368 aa		12.83	□□□□□ -0.36
MAP3K4-208	ENST00000536852	ZNF662	Q6ZS27	426 aa		12.83	□□□□□ -0.36
MAP3K4-208	ENST00000536852	FAM196A	Q6ZSG2	479 aa		12.83	□□□□□ -0.36
MAP3K4-208	ENST00000536852	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	12.83	□□□□□ -0.36
MAP3K4-208	ENST00000536852	NEK11	Q8NG66	645 aa		12.83	□□□□□ -0.36
MAP3K4-208	ENST00000536852	LACRT	Q9GZZ8	138 aa		12.83	□□□□□ -0.36
MAP3K4-208	ENST00000536852	SEMA6B	Q9H3T3	888 aa		12.83	□□□□□ -0.36
MAP3K4-208	ENST00000536852	RCCD1	A6NED2	376 aa		12.82	□□□□□ -0.36
MAP3K4-208	ENST00000536852	EIF3CL	B5ME19	914 aa	Known RBP	12.82	□□□□□ -0.36
MAP3K4-208	ENST00000536852	NKRF	O15226	690 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
MAP3K4-208	ENST00000536852	EIF3J	O75822	258 aa	Known RBP	12.82	□□□□□ -0.36
MAP3K4-208	ENST00000536852	GRB10	Q13322	594 aa		12.82	□□□□□ -0.36
MAP3K4-208	ENST00000536852	SLF2	Q8IX21	1173 aa		12.82	□□□□□ -0.36
MAP3K4-208	ENST00000536852	ZBTB9	Q96C00	473 aa		12.82	□□□□□ -0.36
MAP3K4-208	ENST00000536852	CDK5RAP3	Q96JB5	506 aa		12.82	□□□□□ -0.36
MAP3K4-208	ENST00000536852	MTMR9	Q96QG7	549 aa		12.82	□□□□□ -0.36
MAP3K4-208	ENST00000536852	ERGIC2	Q96RQ1	377 aa		12.82	□□□□□ -0.36
MAP3K4-208	ENST00000536852	EIF3C	Q99613	913 aa	Known RBP	12.82	□□□□□ -0.36
MAP3K4-208	ENST00000536852	RIOX1	Q9H6W3	641 aa		12.82	□□□□□ -0.36
MAP3K4-208	ENST00000536852	MYMK	A6NI61	221 aa		12.82	□□□□□ -0.36
MAP3K4-208	ENST00000536852	SRGAP2	O75044	1071 aa		12.82	□□□□□ -0.36
MAP3K4-208	ENST00000536852	PDHB	P11177	359 aa		12.82	□□□□□ -0.36
MAP3K4-208	ENST00000536852	CYP27A1	Q02318	531 aa		12.82	□□□□□ -0.36
MAP3K4-208	ENST00000536852	TMEM266	Q2M3C6	531 aa		12.82	□□□□□ -0.36
MAP3K4-208	ENST00000536852	COBLL1	Q53SF7	1204 aa		12.82	□□□□□ -0.36
MAP3K4-208	ENST00000536852	PAPD7	Q5XG87	772 aa	Known RBP	12.82	□□□□□ -0.36
MAP3K4-208	ENST00000536852	CENPP	Q6IPU0	288 aa		12.82	□□□□□ -0.36
MAP3K4-208	ENST00000536852	DYM	Q7RTS9	669 aa		12.82	□□□□□ -0.36
MAP3K4-208	ENST00000536852	TXLNB	Q8N3L3	684 aa		12.82	□□□□□ -0.36
MAP3K4-208	ENST00000536852	COA7	Q96BR5	231 aa		12.82	□□□□□ -0.36
MAP3K4-208	ENST00000536852	BLOC1S4	Q9NUP1	217 aa		12.82	□□□□□ -0.36
MAP3K4-208	ENST00000536852	CALCOCO1	Q9P1Z2	691 aa		12.82	□□□□□ -0.36
MAP3K4-208	ENST00000536852	CDK5RAP2	Q96SN8	1893 aa		12.81	□□□□□ -0.36
MAP3K4-208	ENST00000536852		A0A1W2PQJ5	194 aa		12.81	□□□□□ -0.36
MAP3K4-208	ENST00000536852	NOV	P48745	357 aa		12.81	□□□□□ -0.36
MAP3K4-208	ENST00000536852	ADCY7	P51828	1080 aa		12.81	□□□□□ -0.36
MAP3K4-208	ENST00000536852	CASP8	Q14790	479 aa		12.81	□□□□□ -0.36
MAP3K4-208	ENST00000536852	FIGN	Q5HY92	759 aa		12.81	□□□□□ -0.36
MAP3K4-208	ENST00000536852	FAM163A	Q96GL9	167 aa	Predicted RBP	12.81	□□□□□ -0.36
MAP3K4-208	ENST00000536852	CAPZA3	Q96KX2	299 aa		12.81	□□□□□ -0.36
MAP3K4-208	ENST00000536852	PNMA5	Q96PV4	448 aa		12.81	□□□□□ -0.36
MAP3K4-208	ENST00000536852	MMS19	Q96T76	1030 aa		12.81	□□□□□ -0.36
MAP3K4-208	ENST00000536852	RNF216	Q9NWF9	866 aa	Predicted RBP	12.81	□□□□□ -0.36
MAP3K4-208	ENST00000536852	STK17A	Q9UEE5	414 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms