RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 MCMBPQ9BTE3 642 aa8.37□□□□□ -1.07
CLIP1-207ENST00000536634 ARHGAP5Q13017 1502 aa8.37□□□□□ -1.07
CLIP1-207ENST00000536634 CD3EP07766 207 aa8.36□□□□□ -1.07
CLIP1-207ENST00000536634 IFNGR1P15260 489 aa8.36□□□□□ -1.07
CLIP1-207ENST00000536634 KIR2DL1P43626 348 aaPredicted RBP8.36□□□□□ -1.07
CLIP1-207ENST00000536634 KIR2DL2P43627 348 aaPredicted RBP8.36□□□□□ -1.07
CLIP1-207ENST00000536634 FZD5Q13467 585 aa8.36□□□□□ -1.07
CLIP1-207ENST00000536634 CEP128Q6ZU80 1094 aa8.36□□□□□ -1.07
CLIP1-207ENST00000536634 SPPL2CQ8IUH8 684 aa8.36□□□□□ -1.07
CLIP1-207ENST00000536634 FAM178BQ8IXR5 827 aa8.36□□□□□ -1.07
CLIP1-207ENST00000536634 LILRA2Q8N149 483 aa8.36□□□□□ -1.07
CLIP1-207ENST00000536634 TMEM52Q8NDY8 209 aa8.36□□□□□ -1.07
CLIP1-207ENST00000536634 HNRNPLLQ8WVV9 542 aaKnown RBP8.36□□□□□ -1.07
CLIP1-207ENST00000536634 SHISA4Q96DD7 197 aa8.36□□□□□ -1.07
CLIP1-207ENST00000536634 FCRL3Q96P31 734 aaPredicted RBP8.36□□□□□ -1.07
CLIP1-207ENST00000536634 CGGBP1Q9UFW8 167 aaPredicted RBP8.36□□□□□ -1.07
CLIP1-207ENST00000536634 GPR160Q9UJ42 338 aa8.36□□□□□ -1.07
CLIP1-207ENST00000536634 DIS3Q9Y2L1 958 aaKnown RBP8.36□□□□□ -1.07
CLIP1-207ENST00000536634 GPR55Q9Y2T6 319 aaPredicted RBP8.36□□□□□ -1.07
CLIP1-207ENST00000536634 SF3B6Q9Y3B4 125 aaKnown RBP8.36□□□□□ -1.07
CLIP1-207ENST00000536634 CDC42BPBQ9Y5S2 1711 aa8.36□□□□□ -1.07
CLIP1-207ENST00000536634 MLH3Q9UHC1 1453 aa8.36□□□□□ -1.07
CLIP1-207ENST00000536634 KIDINS220Q9ULH0 1771 aa8.35□□□□□ -1.07
CLIP1-207ENST00000536634 MROH2AA6NES4 1674 aa8.35□□□□□ -1.07
CLIP1-207ENST00000536634 ZNF142P52746 1687 aaPredicted RBP8.35□□□□□ -1.07
CLIP1-207ENST00000536634 ANKRD34BA5PLL1 514 aa8.35□□□□□ -1.07
CLIP1-207ENST00000536634 FADS2P1A8MWK0 482 aa8.35□□□□□ -1.07
CLIP1-207ENST00000536634 PPM1BO75688 479 aa8.35□□□□□ -1.07
CLIP1-207ENST00000536634 HSPA1LP34931 641 aa8.35□□□□□ -1.07
CLIP1-207ENST00000536634 NCAPHQ15003 741 aa8.35□□□□□ -1.07
CLIP1-207ENST00000536634 MLANAQ16655 118 aa8.35□□□□□ -1.07
CLIP1-207ENST00000536634 MPZL3Q6UWV2 235 aa8.35□□□□□ -1.07
CLIP1-207ENST00000536634 PRR23BQ6ZRT6 265 aa8.35□□□□□ -1.07
CLIP1-207ENST00000536634 PLCD4Q9BRC7 762 aa8.35□□□□□ -1.07
CLIP1-207ENST00000536634 LGR4Q9BXB1 951 aa8.35□□□□□ -1.07
CLIP1-207ENST00000536634 KRTAP4-2Q9BYR5 136 aa8.35□□□□□ -1.07
CLIP1-207ENST00000536634 MYO3AQ8NEV4 1616 aa8.35□□□□□ -1.07
CLIP1-207ENST00000536634 LRRIQ1Q96JM4 1722 aa8.34□□□□□ -1.07
CLIP1-207ENST00000536634 ABCC1P33527 1531 aa8.34□□□□□ -1.07
CLIP1-207ENST00000536634 ITSN2Q9NZM3 1697 aa8.34□□□□□ -1.07
CLIP1-207ENST00000536634 TCOF1Q13428 1488 aaKnown RBP8.34□□□□□ -1.07
CLIP1-207ENST00000536634 LRRC10BA6NIK2 292 aa8.34□□□□□ -1.07
CLIP1-207ENST00000536634 VAMP4O75379 141 aa8.34□□□□□ -1.07
CLIP1-207ENST00000536634 KIR3DS1Q14943 382 aa8.34□□□□□ -1.07
CLIP1-207ENST00000536634 MRM1Q6IN84 353 aaKnown RBP8.34□□□□□ -1.07
CLIP1-207ENST00000536634 ARHGEF39Q8N4T4 335 aa8.34□□□□□ -1.07
CLIP1-207ENST00000536634 CELF2-AS1Q8N7Q2 184 aa8.34□□□□□ -1.07
CLIP1-207ENST00000536634 KCNK12Q9HB15 430 aa8.34□□□□□ -1.07
CLIP1-207ENST00000536634 TNFRSF10DQ9UBN6 386 aa8.34□□□□□ -1.07
CLIP1-207ENST00000536634 SUGT1Q9Y2Z0 365 aa8.34□□□□□ -1.07
CLIP1-207ENST00000536634 NPATQ14207 1427 aa8.34□□□□□ -1.07
CLIP1-207ENST00000536634 SUPT6HQ7KZ85 1726 aaKnown RBP8.34□□□□□ -1.07
CLIP1-207ENST00000536634 NRDCO43847 1150 aa8.33□□□□□ -1.08
CLIP1-207ENST00000536634 ENDOUP21128 410 aaKnown RBP8.33□□□□□ -1.08
CLIP1-207ENST00000536634 RTP1P59025 263 aa8.33□□□□□ -1.08
CLIP1-207ENST00000536634 POU4F1Q01851 419 aa8.33□□□□□ -1.08
CLIP1-207ENST00000536634 SLC14A2Q15849 920 aa8.33□□□□□ -1.08
CLIP1-207ENST00000536634 ANKS3Q6ZW76 656 aa8.33□□□□□ -1.08
CLIP1-207ENST00000536634 SLCO6A1Q86UG4 719 aa8.33□□□□□ -1.08
CLIP1-207ENST00000536634 NLRX1Q86UT6 975 aa8.33□□□□□ -1.08
CLIP1-207ENST00000536634 SIRT2Q8IXJ6 389 aa8.33□□□□□ -1.08
CLIP1-207ENST00000536634 RCC1LQ96I51 464 aaKnown RBP8.33□□□□□ -1.08
CLIP1-207ENST00000536634 CNTLNQ9NXG0 1405 aa8.33□□□□□ -1.08
CLIP1-207ENST00000536634 CEP170BQ9Y4F5 1589 aaPredicted RBP8.33□□□□□ -1.08
CLIP1-207ENST00000536634 PLA2R1Q13018 1463 aa8.32□□□□□ -1.08
CLIP1-207ENST00000536634 TROQ12816 1431 aaPredicted RBP8.32□□□□□ -1.08
CLIP1-207ENST00000536634 STXBP3O00186 592 aa8.32□□□□□ -1.08
CLIP1-207ENST00000536634 FGF10O15520 208 aaPredicted RBP8.32□□□□□ -1.08
CLIP1-207ENST00000536634 KLF4O43474 513 aa8.32□□□□□ -1.08
CLIP1-207ENST00000536634 DDAH1O94760 285 aa8.32□□□□□ -1.08
CLIP1-207ENST00000536634 FXNQ16595 210 aa8.32□□□□□ -1.08
CLIP1-207ENST00000536634 DPY19L1Q2PZI1 675 aa8.32□□□□□ -1.08
CLIP1-207ENST00000536634 HSF5Q4G112 596 aaPredicted RBP8.32□□□□□ -1.08
CLIP1-207ENST00000536634 ZNF648Q5T619 568 aaPredicted RBP8.32□□□□□ -1.08
CLIP1-207ENST00000536634 POU5F2Q8N7G0 328 aa8.32□□□□□ -1.08
CLIP1-207ENST00000536634 C8orf37Q96NL8 207 aa8.32□□□□□ -1.08
CLIP1-207ENST00000536634 DIRC2Q96SL1 478 aa8.32□□□□□ -1.08
CLIP1-207ENST00000536634 APBA2Q99767 749 aa8.32□□□□□ -1.08
CLIP1-207ENST00000536634 CWC22Q9HCG8 908 aaKnown RBP8.32□□□□□ -1.08
CLIP1-207ENST00000536634 AKT3Q9Y243 479 aa8.32□□□□□ -1.08
CLIP1-207ENST00000536634 YBX2Q9Y2T7 364 aaKnown RBP8.32□□□□□ -1.08
CLIP1-207ENST00000536634 CLTCQ00610 1675 aaKnown RBP8.32□□□□□ -1.08
CLIP1-207ENST00000536634 ZMYM3Q14202 1370 aa8.32□□□□□ -1.08
CLIP1-207ENST00000536634 PREX2Q70Z35 1606 aa8.32□□□□□ -1.08
CLIP1-207ENST00000536634 ALKQ9UM73 1620 aa8.32□□□□□ -1.08
CLIP1-207ENST00000536634 AURKAO14965 403 aa8.31□□□□□ -1.08
CLIP1-207ENST00000536634 GJB6O95452 261 aa8.31□□□□□ -1.08
CLIP1-207ENST00000536634 NOP2P46087 812 aaKnown RBP8.31□□□□□ -1.08
CLIP1-207ENST00000536634 ZNF143P52747 638 aaPredicted RBP8.31□□□□□ -1.08
CLIP1-207ENST00000536634 NAT16Q8N8M0 369 aa8.31□□□□□ -1.08
CLIP1-207ENST00000536634 JMJD8Q96S16 334 aa8.31□□□□□ -1.08
CLIP1-207ENST00000536634 NSUN3Q9H649 340 aaKnown RBP8.31□□□□□ -1.08
CLIP1-207ENST00000536634 ST7Q9NRC1 585 aa8.31□□□□□ -1.08
CLIP1-207ENST00000536634 FAM53CQ9NYF3 392 aa8.31□□□□□ -1.08
CLIP1-207ENST00000536634 EMC9Q9Y3B6 208 aa8.31□□□□□ -1.08
CLIP1-207ENST00000536634 SUSD5O60279 629 aa8.3□□□□□ -1.08
CLIP1-207ENST00000536634 MESP2Q0VG99 397 aa8.3□□□□□ -1.08
CLIP1-207ENST00000536634 GRB10Q13322 594 aa8.3□□□□□ -1.08
CLIP1-207ENST00000536634 SNX17Q15036 470 aa8.3□□□□□ -1.08
CLIP1-207ENST00000536634 BVESQ8NE79 360 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms