RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 ZNF467Q7Z7K2 595 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF1A-208ENST00000536194 RRP36Q96EU6 259 aaKnown RBP13.11□□□□□ -0.31
TNFRSF1A-208ENST00000536194 C22orf23Q9BZE7 217 aa13.11□□□□□ -0.31
TNFRSF1A-208ENST00000536194 ALDH8A1Q9H2A2 487 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF1A-208ENST00000536194 NCOA5Q9HCD5 579 aaKnown RBP13.11□□□□□ -0.31
TNFRSF1A-208ENST00000536194 TPCN1Q9ULQ1 816 aa13.11□□□□□ -0.31
TNFRSF1A-208ENST00000536194 MRPL11Q9Y3B7 192 aaKnown RBP13.11□□□□□ -0.31
TNFRSF1A-208ENST00000536194 GJB1P08034 283 aa13.1□□□□□ -0.31
TNFRSF1A-208ENST00000536194 EN2P19622 333 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF1A-208ENST00000536194 CCT2P78371 535 aaKnown RBP13.1□□□□□ -0.31
TNFRSF1A-208ENST00000536194 GHRHRQ02643 423 aa13.1□□□□□ -0.31
TNFRSF1A-208ENST00000536194 ARMCX2Q7L311 632 aa13.1□□□□□ -0.31
TNFRSF1A-208ENST00000536194 RGS22Q8NE09 1264 aa13.1□□□□□ -0.31
TNFRSF1A-208ENST00000536194 ZNF274Q96GC6 653 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF1A-208ENST00000536194 DEFB118Q96PH6 123 aa13.1□□□□□ -0.31
TNFRSF1A-208ENST00000536194 HMX1Q9NP08 348 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF1A-208ENST00000536194 SYNGAP1Q96PV0 1343 aa13.1□□□□□ -0.31
TNFRSF1A-208ENST00000536194 KIAA1217Q5T5P2 1943 aa13.09□□□□□ -0.31
TNFRSF1A-208ENST00000536194 PPFIA3O75145 1194 aa13.09□□□□□ -0.31
TNFRSF1A-208ENST00000536194 LARGE1O95461 756 aa13.09□□□□□ -0.31
TNFRSF1A-208ENST00000536194 ZNF865P0CJ78 1059 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF1A-208ENST00000536194 GJA8P48165 433 aa13.09□□□□□ -0.31
TNFRSF1A-208ENST00000536194 ALDH5A1P51649 535 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF1A-208ENST00000536194 HSD17B4P51659 736 aa13.09□□□□□ -0.31
TNFRSF1A-208ENST00000536194 NEK4P51957 841 aa13.09□□□□□ -0.31
TNFRSF1A-208ENST00000536194 STK3Q13188 491 aa13.09□□□□□ -0.31
TNFRSF1A-208ENST00000536194 PPP2R5BQ15173 497 aa13.09□□□□□ -0.31
TNFRSF1A-208ENST00000536194 WWC2Q6AWC2 1192 aa13.09□□□□□ -0.31
TNFRSF1A-208ENST00000536194 TYW1BQ6NUM6 668 aa13.09□□□□□ -0.31
TNFRSF1A-208ENST00000536194 MSL3Q8N5Y2 521 aaKnown RBP13.09□□□□□ -0.31
TNFRSF1A-208ENST00000536194 SYTL5Q8TDW5 730 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF1A-208ENST00000536194 U2AF1L4Q8WU68 220 aaKnown RBP13.09□□□□□ -0.31
TNFRSF1A-208ENST00000536194 TMEM106CQ9BVX2 250 aa13.09□□□□□ -0.31
TNFRSF1A-208ENST00000536194 BACH2Q9BYV9 841 aa13.09□□□□□ -0.31
TNFRSF1A-208ENST00000536194 KATNBL1Q9H079 304 aa13.09□□□□□ -0.31
TNFRSF1A-208ENST00000536194 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF1A-208ENST00000536194 SEC63Q9UGP8 760 aaKnown RBP13.09□□□□□ -0.31
TNFRSF1A-208ENST00000536194 V9GY48 417 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF1A-208ENST00000536194 CCDC196A0A1B0GTZ2 297 aa13.08□□□□□ -0.32
TNFRSF1A-208ENST00000536194 SGPL1O95470 568 aa13.08□□□□□ -0.32
TNFRSF1A-208ENST00000536194 CFBP00751 764 aa13.08□□□□□ -0.32
TNFRSF1A-208ENST00000536194 HOXA13P31271 388 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF1A-208ENST00000536194 LHX8Q68G74 356 aa13.08□□□□□ -0.32
TNFRSF1A-208ENST00000536194 NOL8Q76FK4 1167 aaKnown RBP13.08□□□□□ -0.32
TNFRSF1A-208ENST00000536194 MCF2L2Q86YR7 1114 aa13.08□□□□□ -0.32
TNFRSF1A-208ENST00000536194 MORC4Q8TE76 937 aa13.08□□□□□ -0.32
TNFRSF1A-208ENST00000536194 GPKOWQ92917 476 aaPredicted RBP eCLIP13.08□□□□□ -0.32
TNFRSF1A-208ENST00000536194 PHKBQ93100 1093 aa13.08□□□□□ -0.32
TNFRSF1A-208ENST00000536194 TAAR1Q96RJ0 339 aa13.08□□□□□ -0.32
TNFRSF1A-208ENST00000536194 CRISPLD2Q9H0B8 497 aa13.08□□□□□ -0.32
TNFRSF1A-208ENST00000536194 ADCY6O43306 1168 aa13.07□□□□□ -0.32
TNFRSF1A-208ENST00000536194 IFNAR1P17181 557 aa13.07□□□□□ -0.32
TNFRSF1A-208ENST00000536194 EDNRBP24530 442 aa13.07□□□□□ -0.32
TNFRSF1A-208ENST00000536194 CNGA1P29973 690 aa13.07□□□□□ -0.32
TNFRSF1A-208ENST00000536194 SCRN1Q12765 414 aa13.07□□□□□ -0.32
TNFRSF1A-208ENST00000536194 PKN1Q16512 942 aa13.07□□□□□ -0.32
TNFRSF1A-208ENST00000536194 ANO1Q5XXA6 986 aa13.07□□□□□ -0.32
TNFRSF1A-208ENST00000536194 LENG1Q96BZ8 264 aaPredicted RBP13.07□□□□□ -0.32
TNFRSF1A-208ENST00000536194 TBC1D32Q96NH3 1257 aa13.07□□□□□ -0.32
TNFRSF1A-208ENST00000536194 MAF1Q9H063 256 aa13.07□□□□□ -0.32
TNFRSF1A-208ENST00000536194 DDX20Q9UHI6 824 aaKnown RBP13.07□□□□□ -0.32
TNFRSF1A-208ENST00000536194 NRBP1Q9UHY1 535 aa13.07□□□□□ -0.32
TNFRSF1A-208ENST00000536194 ASB14A6NK59 587 aa13.06□□□□□ -0.32
TNFRSF1A-208ENST00000536194 STXBP3O00186 592 aa13.06□□□□□ -0.32
TNFRSF1A-208ENST00000536194 MEIS2O14770 477 aa13.06□□□□□ -0.32
TNFRSF1A-208ENST00000536194 SEPT4O43236 478 aa13.06□□□□□ -0.32
TNFRSF1A-208ENST00000536194 PRPF3O43395 683 aaKnown RBP13.06□□□□□ -0.32
TNFRSF1A-208ENST00000536194 PFKFB2O60825 505 aa13.06□□□□□ -0.32
TNFRSF1A-208ENST00000536194 DTNBO60941 627 aa13.06□□□□□ -0.32
TNFRSF1A-208ENST00000536194 MNX1P50219 401 aaPredicted RBP13.06□□□□□ -0.32
TNFRSF1A-208ENST00000536194 ST3GAL1Q11201 340 aa13.06□□□□□ -0.32
TNFRSF1A-208ENST00000536194 TRAF1Q13077 416 aa13.06□□□□□ -0.32
TNFRSF1A-208ENST00000536194 ACVR2BQ13705 512 aa13.06□□□□□ -0.32
TNFRSF1A-208ENST00000536194 ANKRD1Q15327 319 aa13.06□□□□□ -0.32
TNFRSF1A-208ENST00000536194 ME3Q16798 604 aa13.06□□□□□ -0.32
TNFRSF1A-208ENST00000536194 PFKFB3Q16875 520 aaPredicted RBP13.06□□□□□ -0.32
TNFRSF1A-208ENST00000536194 HEATR3Q7Z4Q2 680 aa13.06□□□□□ -0.32
TNFRSF1A-208ENST00000536194 DNERQ8NFT8 737 aa13.06□□□□□ -0.32
TNFRSF1A-208ENST00000536194 ABHD16BQ9H3Z7 469 aa13.06□□□□□ -0.32
TNFRSF1A-208ENST00000536194 ZHX1Q9UKY1 873 aaPredicted RBP13.06□□□□□ -0.32
TNFRSF1A-208ENST00000536194 OGDHLQ9ULD0 1010 aa13.06□□□□□ -0.32
TNFRSF1A-208ENST00000536194 CNPY2Q9Y2B0 182 aa13.06□□□□□ -0.32
TNFRSF1A-208ENST00000536194 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF1A-208ENST00000536194 GCOM1H8Y6P7 765 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF1A-208ENST00000536194 CTDNEP1O95476 244 aa13.05□□□□□ -0.32
TNFRSF1A-208ENST00000536194 POLR2MP0CAP2 368 aa13.05□□□□□ -0.32
TNFRSF1A-208ENST00000536194 SCG2P13521 617 aa13.05□□□□□ -0.32
TNFRSF1A-208ENST00000536194 RGS19P49795 217 aa13.05□□□□□ -0.32
TNFRSF1A-208ENST00000536194 TAPT1Q6NXT6 567 aa13.05□□□□□ -0.32
TNFRSF1A-208ENST00000536194 USP17L6PQ6QN14 398 aa13.05□□□□□ -0.32
TNFRSF1A-208ENST00000536194 EEPD1Q7L9B9 569 aa13.05□□□□□ -0.32
TNFRSF1A-208ENST00000536194 UBE2Q1Q7Z7E8 422 aa13.05□□□□□ -0.32
TNFRSF1A-208ENST00000536194 FBXO16Q8IX29 292 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF1A-208ENST00000536194 SAMD3Q8N6K7 520 aa13.05□□□□□ -0.32
TNFRSF1A-208ENST00000536194 SLC26A6Q9BXS9 759 aa13.05□□□□□ -0.32
TNFRSF1A-208ENST00000536194 RNF26Q9BY78 433 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF1A-208ENST00000536194 SLKQ9H2G2 1235 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF1A-208ENST00000536194 PDGFCQ9NRA1 345 aa13.05□□□□□ -0.32
TNFRSF1A-208ENST00000536194 MAP3K20Q9NYL2 800 aaKnown RBP13.05□□□□□ -0.32
TNFRSF1A-208ENST00000536194 ADD3Q9UEY8 706 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms