RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 NKX2-4Q9H2Z4 354 aa4.65□□□□□ -1.67
SNHG1-202ENST00000535689 PCMTD2Q9NV79 361 aa4.65□□□□□ -1.67
SNHG1-202ENST00000535689 FAM86C1Q9NVL1 165 aa4.65□□□□□ -1.67
SNHG1-202ENST00000535689 TNFRSF10DQ9UBN6 386 aa4.65□□□□□ -1.67
SNHG1-202ENST00000535689 PLAAQ9Y263 795 aa4.65□□□□□ -1.67
SNHG1-202ENST00000535689 NUB1Q9Y5A7 615 aa4.65□□□□□ -1.67
SNHG1-202ENST00000535689 AGLP35573 1532 aa4.65□□□□□ -1.67
SNHG1-202ENST00000535689 ZNF335Q9H4Z2 1342 aaPredicted RBP4.65□□□□□ -1.67
SNHG1-202ENST00000535689 CAMSAP1Q5T5Y3 1602 aa4.64□□□□□ -1.67
SNHG1-202ENST00000535689 CPS1P31327 1500 aa4.64□□□□□ -1.67
SNHG1-202ENST00000535689 TRBV23-1A0A0A0MS06 115 aa4.64□□□□□ -1.67
SNHG1-202ENST00000535689 SCO2A0A1W2PP80 73 aa4.64□□□□□ -1.67
SNHG1-202ENST00000535689 A0A1W2PQU0 124 aa4.64□□□□□ -1.67
SNHG1-202ENST00000535689 C2orf71A6NGG8 1288 aa4.64□□□□□ -1.67
SNHG1-202ENST00000535689 B2RBV5 119 aa4.64□□□□□ -1.67
SNHG1-202ENST00000535689 B4E1Z4 1266 aa4.64□□□□□ -1.67
SNHG1-202ENST00000535689 LRRN2O75325 713 aa4.64□□□□□ -1.67
SNHG1-202ENST00000535689 TGFB1P01137 390 aa4.64□□□□□ -1.67
SNHG1-202ENST00000535689 ITGAVP06756 1048 aa4.64□□□□□ -1.67
SNHG1-202ENST00000535689 CD3EP07766 207 aa4.64□□□□□ -1.67
SNHG1-202ENST00000535689 SYPP08247 313 aa4.64□□□□□ -1.67
SNHG1-202ENST00000535689 SNRPB2P08579 225 aaKnown RBP4.64□□□□□ -1.67
SNHG1-202ENST00000535689 VAV1P15498 845 aa4.64□□□□□ -1.67
SNHG1-202ENST00000535689 IBSPP21815 317 aaPredicted RBP4.64□□□□□ -1.67
SNHG1-202ENST00000535689 KIR2DL1P43626 348 aaPredicted RBP4.64□□□□□ -1.67
SNHG1-202ENST00000535689 KIR2DL2P43627 348 aaPredicted RBP4.64□□□□□ -1.67
SNHG1-202ENST00000535689 FNDC3BQ53EP0 1204 aaKnown RBP4.64□□□□□ -1.67
SNHG1-202ENST00000535689 ACBD5Q5T8D3 534 aaPredicted RBP4.64□□□□□ -1.67
SNHG1-202ENST00000535689 GTF2IRD2BQ6EKJ0 949 aa4.64□□□□□ -1.67
SNHG1-202ENST00000535689 SLC23A3Q6PIS1 610 aa4.64□□□□□ -1.67
SNHG1-202ENST00000535689 MAMDC2Q7Z304 686 aaPredicted RBP4.64□□□□□ -1.67
SNHG1-202ENST00000535689 GTF2IRD2Q86UP8 949 aa4.64□□□□□ -1.67
SNHG1-202ENST00000535689 ANKLE2Q86XL3 938 aa4.64□□□□□ -1.67
SNHG1-202ENST00000535689 JAMLQ86YT9 394 aa4.64□□□□□ -1.67
SNHG1-202ENST00000535689 THEMISQ8N1K5 641 aaPredicted RBP4.64□□□□□ -1.67
SNHG1-202ENST00000535689 PLD6Q8N2A8 252 aaKnown RBP4.64□□□□□ -1.67
SNHG1-202ENST00000535689 ANKS4BQ8N8V4 417 aa4.64□□□□□ -1.67
SNHG1-202ENST00000535689 FAM181AQ8N9Y4 354 aa4.64□□□□□ -1.67
SNHG1-202ENST00000535689 FLCNQ8NFG4 579 aa4.64□□□□□ -1.67
SNHG1-202ENST00000535689 ADCY4Q8NFM4 1077 aa4.64□□□□□ -1.67
SNHG1-202ENST00000535689 ZCRB1Q8TBF4 217 aaKnown RBP4.64□□□□□ -1.67
SNHG1-202ENST00000535689 SH3TC2Q8TF17 1288 aa4.64□□□□□ -1.67
SNHG1-202ENST00000535689 DCAF4Q8WV16 495 aa4.64□□□□□ -1.67
SNHG1-202ENST00000535689 FCRL2Q96LA5 508 aaPredicted RBP4.64□□□□□ -1.67
SNHG1-202ENST00000535689 MRGPRX3Q96LB0 322 aa4.64□□□□□ -1.67
SNHG1-202ENST00000535689 MRPL4Q9BYD3 311 aaKnown RBP4.64□□□□□ -1.67
SNHG1-202ENST00000535689 SEMA3GQ9NS98 782 aa4.64□□□□□ -1.67
SNHG1-202ENST00000535689 TMEM260Q9NX78 707 aa4.64□□□□□ -1.67
SNHG1-202ENST00000535689 PFDN2Q9UHV9 154 aa4.64□□□□□ -1.67
SNHG1-202ENST00000535689 MYO5CQ9NQX4 1742 aa4.63□□□□□ -1.67
SNHG1-202ENST00000535689 PLA2R1Q13018 1463 aa4.63□□□□□ -1.67
SNHG1-202ENST00000535689 A0A1W2PQJ5 194 aa4.63□□□□□ -1.67
SNHG1-202ENST00000535689 BIN1O00499 593 aa4.63□□□□□ -1.67
SNHG1-202ENST00000535689 AURKAO14965 403 aa4.63□□□□□ -1.67
SNHG1-202ENST00000535689 MEFVO15553 781 aaPredicted RBP4.63□□□□□ -1.67
SNHG1-202ENST00000535689 ZNF205O95201 554 aa4.63□□□□□ -1.67
SNHG1-202ENST00000535689 SCG5P05408 212 aa4.63□□□□□ -1.67
SNHG1-202ENST00000535689 GSTM1P09488 218 aa4.63□□□□□ -1.67
SNHG1-202ENST00000535689 CPEP16870 476 aa4.63□□□□□ -1.67
SNHG1-202ENST00000535689 RPL10P27635 214 aaKnown RBP4.63□□□□□ -1.67
SNHG1-202ENST00000535689 ZP2Q05996 745 aa4.63□□□□□ -1.67
SNHG1-202ENST00000535689 SNX17Q15036 470 aa4.63□□□□□ -1.67
SNHG1-202ENST00000535689 SLC14A2Q15849 920 aa4.63□□□□□ -1.67
SNHG1-202ENST00000535689 MSMPQ1L6U9 139 aa4.63□□□□□ -1.67
SNHG1-202ENST00000535689 TMC3Q7Z5M5 1100 aa4.63□□□□□ -1.67
SNHG1-202ENST00000535689 DTX1Q86Y01 620 aa4.63□□□□□ -1.67
SNHG1-202ENST00000535689 LILRA2Q8N149 483 aa4.63□□□□□ -1.67
SNHG1-202ENST00000535689 USHBP1Q8N6Y0 703 aa4.63□□□□□ -1.67
SNHG1-202ENST00000535689 PI4K2BQ8TCG2 481 aa4.63□□□□□ -1.67
SNHG1-202ENST00000535689 MICAL1Q8TDZ2 1067 aa4.63□□□□□ -1.67
SNHG1-202ENST00000535689 FEZ1Q99689 392 aa4.63□□□□□ -1.67
SNHG1-202ENST00000535689 CDADC1Q9BWV3 514 aa4.63□□□□□ -1.67
SNHG1-202ENST00000535689 SUSD2Q9UGT4 822 aa4.63□□□□□ -1.67
SNHG1-202ENST00000535689 PLAGL2Q9UPG8 496 aa4.63□□□□□ -1.67
SNHG1-202ENST00000535689 MROH2AA6NES4 1674 aa4.63□□□□□ -1.67
SNHG1-202ENST00000535689 ZMYM3Q14202 1370 aa4.63□□□□□ -1.67
SNHG1-202ENST00000535689 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.62□□□□□ -1.67
SNHG1-202ENST00000535689 REREQ9P2R6 1566 aa4.62□□□□□ -1.67
SNHG1-202ENST00000535689 A0A1W2PQ45 241 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-202ENST00000535689 A0A1W2PQY0 241 aa4.62□□□□□ -1.67
SNHG1-202ENST00000535689 FITM1A5D6W6 292 aa4.62□□□□□ -1.67
SNHG1-202ENST00000535689 FAM221BA6H8Z2 402 aa4.62□□□□□ -1.67
SNHG1-202ENST00000535689 WTIPA6NIX2 430 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-202ENST00000535689 KIAA1324LA8MWY0 1029 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-202ENST00000535689 PRR33A8MZF0 331 aa4.62□□□□□ -1.67
SNHG1-202ENST00000535689 H0Y8X5 98 aa4.62□□□□□ -1.67
SNHG1-202ENST00000535689 MEIS1O00470 390 aa4.62□□□□□ -1.67
SNHG1-202ENST00000535689 PLD2O14939 933 aa4.62□□□□□ -1.67
SNHG1-202ENST00000535689 SHOXO15266 292 aa4.62□□□□□ -1.67
SNHG1-202ENST00000535689 SMARCA5O60264 1052 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-202ENST00000535689 NPHS1O60500 1241 aa4.62□□□□□ -1.67
SNHG1-202ENST00000535689 RFPL3O75679 317 aa4.62□□□□□ -1.67
SNHG1-202ENST00000535689 NPTXRO95502 500 aa4.62□□□□□ -1.67
SNHG1-202ENST00000535689 PABPC1P11940 636 aaKnown RBP4.62□□□□□ -1.67
SNHG1-202ENST00000535689 ARL4AP40617 200 aa4.62□□□□□ -1.67
SNHG1-202ENST00000535689 CORO7P57737 925 aa4.62□□□□□ -1.67
SNHG1-202ENST00000535689 TMEM62Q0P6H9 643 aa4.62□□□□□ -1.67
SNHG1-202ENST00000535689 GAB4Q2WGN9 574 aa4.62□□□□□ -1.67
SNHG1-202ENST00000535689 PLEKHG4Q58EX7 1191 aa4.62□□□□□ -1.67
SNHG1-202ENST00000535689 MRM1Q6IN84 353 aaKnown RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms