RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 TMED8Q6PL24 325 aaPredicted RBP9.25□□□□□ -0.93
CASP4-212ENST00000533730 HHIPL2Q6UWX4 724 aa9.25□□□□□ -0.93
CASP4-212ENST00000533730 XKR5Q6UX68 686 aa9.25□□□□□ -0.93
CASP4-212ENST00000533730 APOBEC3FQ8IUX4 373 aaKnown RBP9.25□□□□□ -0.93
CASP4-212ENST00000533730 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.25□□□□□ -0.93
CASP4-212ENST00000533730 ABHD17AQ96GS6 310 aa9.25□□□□□ -0.93
CASP4-212ENST00000533730 ZBED3Q96IU2 234 aaPredicted RBP9.25□□□□□ -0.93
CASP4-212ENST00000533730 BCO2Q9BYV7 579 aa9.25□□□□□ -0.93
CASP4-212ENST00000533730 KBTBD4Q9NVX7 518 aa9.25□□□□□ -0.93
CASP4-212ENST00000533730 GGA3Q9NZ52 723 aa9.25□□□□□ -0.93
CASP4-212ENST00000533730 HMG20BQ9P0W2 317 aa9.25□□□□□ -0.93
CASP4-212ENST00000533730 ATXN7L1Q9ULK2 861 aaPredicted RBP9.25□□□□□ -0.93
CASP4-212ENST00000533730 MRPL42Q9Y6G3 142 aaKnown RBP9.25□□□□□ -0.93
CASP4-212ENST00000533730 COL1A1P02452 1464 aaPredicted RBP9.25□□□□□ -0.93
CASP4-212ENST00000533730 EGFRP00533 1210 aa9.24□□□□□ -0.93
CASP4-212ENST00000533730 HSPA6P17066 643 aa9.24□□□□□ -0.93
CASP4-212ENST00000533730 MCAMP43121 646 aa9.24□□□□□ -0.93
CASP4-212ENST00000533730 CRKP46108 304 aa9.24□□□□□ -0.93
CASP4-212ENST00000533730 GSTO1P78417 241 aa9.24□□□□□ -0.93
CASP4-212ENST00000533730 TNFAIP1Q13829 316 aa9.24□□□□□ -0.93
CASP4-212ENST00000533730 CFAP100Q494V2 611 aa9.24□□□□□ -0.93
CASP4-212ENST00000533730 KRT26Q7Z3Y9 468 aa9.24□□□□□ -0.93
CASP4-212ENST00000533730 DZIP1Q86YF9 867 aaKnown RBP9.24□□□□□ -0.93
CASP4-212ENST00000533730 CKAP2LQ8IYA6 745 aa9.24□□□□□ -0.93
CASP4-212ENST00000533730 RASGRP4Q8TDF6 673 aa9.24□□□□□ -0.93
CASP4-212ENST00000533730 ZDHHC15Q96MV8 337 aa9.24□□□□□ -0.93
CASP4-212ENST00000533730 TRERF1Q96PN7 1200 aa9.24□□□□□ -0.93
CASP4-212ENST00000533730 TLR7Q9NYK1 1049 aaKnown RBP9.24□□□□□ -0.93
CASP4-212ENST00000533730 ABCF2Q9UG63 623 aa9.24□□□□□ -0.93
CASP4-212ENST00000533730 PASKQ96RG2 1323 aa9.24□□□□□ -0.93
CASP4-212ENST00000533730 K7ELQ4 463 aaPredicted RBP9.23□□□□□ -0.93
CASP4-212ENST00000533730 LDHCP07864 332 aa9.23□□□□□ -0.93
CASP4-212ENST00000533730 MAPTP10636 758 aaKnown RBP9.23□□□□□ -0.93
CASP4-212ENST00000533730 ATP5JP18859 108 aa9.23□□□□□ -0.93
CASP4-212ENST00000533730 PRDX5P30044 214 aa9.23□□□□□ -0.93
CASP4-212ENST00000533730 TYRO3Q06418 890 aa9.23□□□□□ -0.93
CASP4-212ENST00000533730 TTF1Q15361 905 aaPredicted RBP9.23□□□□□ -0.93
CASP4-212ENST00000533730 NBPF9Q3BBW0 867 aa9.23□□□□□ -0.93
CASP4-212ENST00000533730 ANGEL2Q5VTE6 544 aaKnown RBP9.23□□□□□ -0.93
CASP4-212ENST00000533730 SMC5Q8IY18 1101 aa9.23□□□□□ -0.93
CASP4-212ENST00000533730 MRFAP1L1Q96HT8 127 aa9.23□□□□□ -0.93
CASP4-212ENST00000533730 TMOD2Q9NZR1 351 aa9.23□□□□□ -0.93
CASP4-212ENST00000533730 TMEM63CQ9P1W3 806 aa9.23□□□□□ -0.93
CASP4-212ENST00000533730 LRP2BPQ9P2M1 347 aa9.23□□□□□ -0.93
CASP4-212ENST00000533730 PHF24Q9UPV7 400 aa9.23□□□□□ -0.93
CASP4-212ENST00000533730 GADD45BO75293 160 aaPredicted RBP9.22□□□□□ -0.93
CASP4-212ENST00000533730 MAP4K4O95819 1239 aaPredicted RBP9.22□□□□□ -0.93
CASP4-212ENST00000533730 IRX6P78412 446 aaPredicted RBP9.22□□□□□ -0.93
CASP4-212ENST00000533730 GRIK5Q16478 980 aa9.22□□□□□ -0.93
CASP4-212ENST00000533730 PDE12Q6L8Q7 609 aaKnown RBP9.22□□□□□ -0.93
CASP4-212ENST00000533730 BTLAQ7Z6A9 289 aa9.22□□□□□ -0.93
CASP4-212ENST00000533730 CMTR1Q8N1G2 835 aaKnown RBP9.22□□□□□ -0.93
CASP4-212ENST00000533730 CNTNAP3BQ96NU0 1288 aa9.22□□□□□ -0.93
CASP4-212ENST00000533730 SPON2Q9BUD6 331 aa9.22□□□□□ -0.93
CASP4-212ENST00000533730 CNTNAP3Q9BZ76 1288 aa9.22□□□□□ -0.93
CASP4-212ENST00000533730 GLIS2Q9BZE0 524 aaPredicted RBP9.22□□□□□ -0.93
CASP4-212ENST00000533730 ELP3Q9H9T3 547 aa9.22□□□□□ -0.93
CASP4-212ENST00000533730 ECHDC1Q9NTX5 307 aa9.22□□□□□ -0.93
CASP4-212ENST00000533730 RAI14Q9P0K7 980 aa9.22□□□□□ -0.93
CASP4-212ENST00000533730 FNDC3AQ9Y2H6 1198 aaKnown RBP9.22□□□□□ -0.93
CASP4-212ENST00000533730 PPP2R3BQ9Y5P8 575 aa9.22□□□□□ -0.93
CASP4-212ENST00000533730 TTC41PQ6P2S7 1318 aa9.22□□□□□ -0.93
CASP4-212ENST00000533730 DCDC2BA2VCK2 349 aa9.21□□□□□ -0.94
CASP4-212ENST00000533730 KHNYNO15037 678 aaKnown RBP9.21□□□□□ -0.94
CASP4-212ENST00000533730 ERC2O15083 957 aa9.21□□□□□ -0.94
CASP4-212ENST00000533730 CYP2E1P05181 493 aaPredicted RBP9.21□□□□□ -0.94
CASP4-212ENST00000533730 SSBP05455 408 aaKnown RBP eCLIP9.21□□□□□ -0.94
CASP4-212ENST00000533730 FGFR3P22607 806 aa9.21□□□□□ -0.94
CASP4-212ENST00000533730 INPP5BP32019 993 aa9.21□□□□□ -0.94
CASP4-212ENST00000533730 NF2P35240 595 aa9.21□□□□□ -0.94
CASP4-212ENST00000533730 ARSDP51689 593 aa9.21□□□□□ -0.94
CASP4-212ENST00000533730 MECOMQ03112 1051 aa9.21□□□□□ -0.94
CASP4-212ENST00000533730 MAP3K12Q12852 859 aa9.21□□□□□ -0.94
CASP4-212ENST00000533730 SERINC3Q13530 473 aa9.21□□□□□ -0.94
CASP4-212ENST00000533730 GRM2Q14416 872 aa9.21□□□□□ -0.94
CASP4-212ENST00000533730 ANKRD45Q5TZF3 282 aa9.21□□□□□ -0.94
CASP4-212ENST00000533730 FKBP1CQ5VVH2 108 aa9.21□□□□□ -0.94
CASP4-212ENST00000533730 CERS3Q8IU89 383 aa9.21□□□□□ -0.94
CASP4-212ENST00000533730 PRMT6Q96LA8 375 aaPredicted RBP9.21□□□□□ -0.94
CASP4-212ENST00000533730 NOL10Q9BSC4 688 aaKnown RBP9.21□□□□□ -0.94
CASP4-212ENST00000533730 ZNF408Q9H9D4 720 aa9.21□□□□□ -0.94
CASP4-212ENST00000533730 ZNF70Q9UC06 446 aaPredicted RBP9.21□□□□□ -0.94
CASP4-212ENST00000533730 DAGLAQ9Y4D2 1042 aa9.21□□□□□ -0.94
CASP4-212ENST00000533730 KCNMB2Q9Y691 235 aa9.21□□□□□ -0.94
CASP4-212ENST00000533730 MROH7-TTC4A0A0A0MT08 1334 aa9.21□□□□□ -0.94
CASP4-212ENST00000533730 GAKO14976 1311 aa9.21□□□□□ -0.94
CASP4-212ENST00000533730 ECM29Q5VYK3 1845 aa9.21□□□□□ -0.94
CASP4-212ENST00000533730 C2CD2LO14523 706 aa9.2□□□□□ -0.94
CASP4-212ENST00000533730 BAG3O95817 575 aa9.2□□□□□ -0.94
CASP4-212ENST00000533730 LORP23490 312 aaPredicted RBP9.2□□□□□ -0.94
CASP4-212ENST00000533730 CTBSQ01459 385 aa9.2□□□□□ -0.94
CASP4-212ENST00000533730 LAMC2Q13753 1193 aa9.2□□□□□ -0.94
CASP4-212ENST00000533730 NAA16Q6N069 864 aaPredicted RBP9.2□□□□□ -0.94
CASP4-212ENST00000533730 APOBEC3HQ6NTF7 200 aaKnown RBP9.2□□□□□ -0.94
CASP4-212ENST00000533730 NSUN4Q96CB9 384 aaKnown RBP9.2□□□□□ -0.94
CASP4-212ENST00000533730 HOOK2Q96ED9 719 aa9.2□□□□□ -0.94
CASP4-212ENST00000533730 SEC16BQ96JE7 1060 aa9.2□□□□□ -0.94
CASP4-212ENST00000533730 HAUS7Q99871 368 aa9.2□□□□□ -0.94
CASP4-212ENST00000533730 CHRDQ9H2X0 955 aa9.2□□□□□ -0.94
CASP4-212ENST00000533730 TDRD3Q9H7E2 651 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms