RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 TRAPPC10P48553 1259 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 PAK2Q13177 524 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 MAPK8IP2Q13387 824 aaPredicted RBP7□□□□□ -1.29
UBQLN1-206ENST00000533705 PLCB4Q15147 1175 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 SYDE2Q5VT97 1194 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 RUFY4Q6ZNE9 571 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 FOXP4Q8IVH2 680 aaPredicted RBP7□□□□□ -1.29
UBQLN1-206ENST00000533705 NME8Q8N427 588 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 ZNF713Q8N859 430 aaPredicted RBP7□□□□□ -1.29
UBQLN1-206ENST00000533705 DYNLL2Q96FJ2 89 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 PGBD1Q96JS3 809 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 VPS37BQ9H9H4 285 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 MAGEF1Q9HAY2 307 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7□□□□□ -1.29
UBQLN1-206ENST00000533705 TYW5A2RUC4 315 aaKnown RBP7□□□□□ -1.29
UBQLN1-206ENST00000533705 CIB2O75838 187 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 RNF8O76064 485 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 ZWINTO95229 277 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 RPN1P04843 607 aaKnown RBP7□□□□□ -1.29
UBQLN1-206ENST00000533705 CACNB3P54284 484 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 APOA5Q6Q788 366 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 KRBA2Q6ZNG9 492 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 CTAGE3PQ8IX95 158 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 FBXO18Q8NFZ0 1043 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 PRPF31Q8WWY3 499 aaKnown RBP7□□□□□ -1.29
UBQLN1-206ENST00000533705 SYMPKQ92797 1274 aaKnown RBP7□□□□□ -1.29
UBQLN1-206ENST00000533705 MAP4K1Q92918 833 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 PIGSQ96S52 555 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 RIPOR2Q9Y4F9 1068 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 TBC1D8O95759 1140 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 EN1Q05925 392 aaPredicted RBP7□□□□□ -1.29
UBQLN1-206ENST00000533705 PI16Q6UXB8 463 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 LCORLQ8N3X6 602 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 RASGRP4Q8TDF6 673 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 ATP2A3Q93084 1043 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 PLEKHF1Q96S99 279 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 CARD6Q9BX69 1037 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 XPO4Q9C0E2 1151 aaKnown RBP7□□□□□ -1.29
UBQLN1-206ENST00000533705 BSDC1Q9NW68 430 aaPredicted RBP7□□□□□ -1.29
UBQLN1-206ENST00000533705 SOS2Q07890 1332 aaPredicted RBP7□□□□□ -1.29
UBQLN1-206ENST00000533705 CCDC160A6NGH7 325 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 PTPREP23469 700 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 FAM160B2Q86V87 743 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 CFAP57Q96MR6 1250 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 RAB17Q9H0T7 212 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 ANTXR1Q9H6X2 564 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 RIC8AQ9NPQ8 531 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 STAP2Q9UGK3 403 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 TACC3Q9Y6A5 838 aa7□□□□□ -1.29
UBQLN1-206ENST00000533705 ESYT2A0FGR8 921 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 I3L4J1 428 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 NSFP46459 744 aaKnown RBP6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 BPIFB4P59827 614 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 POLR2FP61218 127 aaKnown RBP6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 PTK2Q05397 1052 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 ZNF827Q17R98 1081 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 SDCCAG8Q86SQ7 713 aaPredicted RBP6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 LARP4BQ92615 738 aaKnown RBP6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 COA7Q96BR5 231 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 ANKRD36BP1Q96IX9 119 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 CLIC6Q96NY7 704 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 SNX25Q9H3E2 840 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 KMT5AQ9NQR1 393 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 KDM5AP29375 1690 aaKnown RBP6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 SPATA31A3Q5VYP0 1347 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 M0R2C6 588 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 STK25O00506 426 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 GAP43P17677 238 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 MECOMQ03112 1051 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 MTERF2Q49AM1 385 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 USP17L2Q6R6M4 530 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 RYBPQ8N488 228 aaPredicted RBP6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 NT5C1BQ96P26 610 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 CUEDC2Q9H467 287 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 PRR36Q9H6K5 1346 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 SASH1O94885 1247 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 MYL3P08590 195 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 EIF2AK2P19525 551 aaKnown RBP6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 ADKP55263 362 aaKnown RBP6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 SCRN1Q12765 414 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 STMN2Q93045 179 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 FAM149B1Q96BN6 582 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 FTOQ9C0B1 505 aaKnown RBP eCLIP6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 CACYBPQ9HB71 228 aaKnown RBP6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 MTMR6Q9Y217 621 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 ARHGEF5Q12774 1597 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 UBN2Q6ZU65 1347 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 PFDN6O15212 129 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 NFX1Q12986 1120 aaKnown RBP6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 TSTA3Q13630 321 aaPredicted RBP6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 MUM1L1Q5H9M0 696 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 PALM2Q8IXS6 379 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 TRIM58Q8NG06 486 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 SKA2Q8WVK7 121 aaPredicted RBP6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 AK8Q96MA6 479 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 FAM49AQ9H0Q0 323 aaPredicted RBP6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 FOXP1Q9H334 677 aaPredicted RBP6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 KIF9Q9HAQ2 790 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 PCDHA7Q9UN72 937 aa6.99□□□□□ -1.29
UBQLN1-206ENST00000533705 ZHX2Q9Y6X8 837 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms