RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 GRIN2CQ14957 1233 aa20.1■□□□□ 0.81
RPUSD4-207ENST00000532800 RASIP1Q5U651 963 aa20.1■□□□□ 0.81
RPUSD4-207ENST00000532800 MFSD6Q6ZSS7 791 aa20.1■□□□□ 0.81
RPUSD4-207ENST00000532800 ZNF365Q70YC5 407 aa20.1■□□□□ 0.81
RPUSD4-207ENST00000532800 TICAM2Q86XR7 235 aa20.1■□□□□ 0.81
RPUSD4-207ENST00000532800 ZKSCAN3Q9BRR0 538 aa20.1■□□□□ 0.81
RPUSD4-207ENST00000532800 ZEB2O60315 1214 aa20.09■□□□□ 0.81
RPUSD4-207ENST00000532800 B4GALT4O60513 344 aa20.09■□□□□ 0.81
RPUSD4-207ENST00000532800 SNHG28P0DPA3 235 aa20.09■□□□□ 0.81
RPUSD4-207ENST00000532800 CALML3P27482 149 aa20.09■□□□□ 0.81
RPUSD4-207ENST00000532800 PBX2P40425 430 aa20.09■□□□□ 0.81
RPUSD4-207ENST00000532800 TIFAQ96CG3 184 aa20.09■□□□□ 0.81
RPUSD4-207ENST00000532800 TRPV6Q9H1D0 765 aa20.09■□□□□ 0.81
RPUSD4-207ENST00000532800 HIPK3Q9H422 1215 aa20.09■□□□□ 0.81
RPUSD4-207ENST00000532800 ADD3Q9UEY8 706 aaKnown RBP20.09■□□□□ 0.81
RPUSD4-207ENST00000532800 Q9Y3F1 56 aa20.09■□□□□ 0.81
RPUSD4-207ENST00000532800 CHD9Q3L8U1 2897 aa20.08■□□□□ 0.81
RPUSD4-207ENST00000532800 GBF1Q92538 1859 aa20.08■□□□□ 0.81
RPUSD4-207ENST00000532800 IGHDP01880 384 aa20.08■□□□□ 0.81
RPUSD4-207ENST00000532800 PCP11498 1178 aaKnown RBP20.08■□□□□ 0.81
RPUSD4-207ENST00000532800 DUSP28Q4G0W2 176 aa20.08■□□□□ 0.81
RPUSD4-207ENST00000532800 PSRC1Q6PGN9 363 aaPredicted RBP20.08■□□□□ 0.81
RPUSD4-207ENST00000532800 PLEKHM2Q8IWE5 1019 aa20.08■□□□□ 0.81
RPUSD4-207ENST00000532800 TTC14Q96N46 770 aa20.08■□□□□ 0.81
RPUSD4-207ENST00000532800 PBX4Q9BYU1 374 aa20.08■□□□□ 0.81
RPUSD4-207ENST00000532800 CPVLQ9H3G5 476 aa20.08■□□□□ 0.81
RPUSD4-207ENST00000532800 ZNF576Q9H609 170 aa20.08■□□□□ 0.81
RPUSD4-207ENST00000532800 IL23AQ9NPF7 189 aa20.08■□□□□ 0.81
RPUSD4-207ENST00000532800 GOLGA8HP0CJ92 632 aa20.07■□□□□ 0.8
RPUSD4-207ENST00000532800 CCL23P55773 120 aa20.07■□□□□ 0.8
RPUSD4-207ENST00000532800 RPS6P62753 249 aaKnown RBP20.07■□□□□ 0.8
RPUSD4-207ENST00000532800 RNF207Q6ZRF8 634 aa20.07■□□□□ 0.8
RPUSD4-207ENST00000532800 CHD1LQ86WJ1 897 aa20.07■□□□□ 0.8
RPUSD4-207ENST00000532800 YTHDC1Q96MU7 727 aaKnown RBP20.07■□□□□ 0.8
RPUSD4-207ENST00000532800 NOC4LQ9BVI4 516 aaKnown RBP20.07■□□□□ 0.8
RPUSD4-207ENST00000532800 WDR11Q9BZH6 1224 aa20.07■□□□□ 0.8
RPUSD4-207ENST00000532800 WNT8AQ9H1J5 351 aa20.07■□□□□ 0.8
RPUSD4-207ENST00000532800 WDR19Q8NEZ3 1342 aa20.06■□□□□ 0.8
RPUSD4-207ENST00000532800 CWC27Q6UX04 472 aaKnown RBP20.06■□□□□ 0.8
RPUSD4-207ENST00000532800 ESR2Q92731 530 aa20.06■□□□□ 0.8
RPUSD4-207ENST00000532800 RWDD1Q9H446 243 aaPredicted RBP20.06■□□□□ 0.8
RPUSD4-207ENST00000532800 RNF41Q9H4P4 317 aaPredicted RBP20.06■□□□□ 0.8
RPUSD4-207ENST00000532800 CXXC1Q9P0U4 656 aaPredicted RBP20.06■□□□□ 0.8
RPUSD4-207ENST00000532800 SPTBN5Q9NRC6 3674 aaKnown RBP20.06■□□□□ 0.8
RPUSD4-207ENST00000532800 LOC102724159A0A0B4J2E5 919 aa20.05■□□□□ 0.8
RPUSD4-207ENST00000532800 RBM47A0AV96 593 aaKnown RBP20.05■□□□□ 0.8
RPUSD4-207ENST00000532800 ZNF213O14771 459 aa20.05■□□□□ 0.8
RPUSD4-207ENST00000532800 MFAP1P55081 439 aaKnown RBP20.05■□□□□ 0.8
RPUSD4-207ENST00000532800 NUCB1Q02818 461 aa20.05■□□□□ 0.8
RPUSD4-207ENST00000532800 PWP2Q15269 919 aaKnown RBP20.05■□□□□ 0.8
RPUSD4-207ENST00000532800 USH1GQ495M9 461 aa20.05■□□□□ 0.8
RPUSD4-207ENST00000532800 USP38Q8NB14 1042 aa20.05■□□□□ 0.8
RPUSD4-207ENST00000532800 OR6J1Q8NGC5 347 aa20.05■□□□□ 0.8
RPUSD4-207ENST00000532800 HERVK_113Q902F9 699 aa20.05■□□□□ 0.8
RPUSD4-207ENST00000532800 UBA5Q9GZZ9 404 aa20.05■□□□□ 0.8
RPUSD4-207ENST00000532800 OSBPL3Q9H4L5 887 aa20.05■□□□□ 0.8
RPUSD4-207ENST00000532800 MYL3P08590 195 aa20.04■□□□□ 0.8
RPUSD4-207ENST00000532800 EDNRBP24530 442 aa20.04■□□□□ 0.8
RPUSD4-207ENST00000532800 PURAQ00577 322 aaKnown RBP20.04■□□□□ 0.8
RPUSD4-207ENST00000532800 PDE4DQ08499 809 aa20.04■□□□□ 0.8
RPUSD4-207ENST00000532800 AAMPQ13685 434 aa20.04■□□□□ 0.8
RPUSD4-207ENST00000532800 PPP1R13LQ8WUF5 828 aa20.04■□□□□ 0.8
RPUSD4-207ENST00000532800 COPS5Q92905 334 aa20.04■□□□□ 0.8
RPUSD4-207ENST00000532800 ALDH8A1Q9H2A2 487 aaPredicted RBP20.04■□□□□ 0.8
RPUSD4-207ENST00000532800 DIAPH3Q9NSV4 1193 aa20.04■□□□□ 0.8
RPUSD4-207ENST00000532800 TRMT13Q9NUP7 481 aaKnown RBP20.04■□□□□ 0.8
RPUSD4-207ENST00000532800 SCN10AQ9Y5Y9 1956 aa20.04■□□□□ 0.8
RPUSD4-207ENST00000532800 B4E1Z4 1266 aa20.03■□□□□ 0.8
RPUSD4-207ENST00000532800 KDM4AO75164 1064 aa20.03■□□□□ 0.8
RPUSD4-207ENST00000532800 PPP2R5BQ15173 497 aa20.03■□□□□ 0.8
RPUSD4-207ENST00000532800 GPATCH4Q5T3I0 446 aaKnown RBP20.03■□□□□ 0.8
RPUSD4-207ENST00000532800 OTOP2Q7RTS6 562 aa20.03■□□□□ 0.8
RPUSD4-207ENST00000532800 DGKHQ86XP1 1220 aa20.03■□□□□ 0.8
RPUSD4-207ENST00000532800 PNMA1Q8ND90 353 aa20.03■□□□□ 0.8
RPUSD4-207ENST00000532800 EXOC6Q8TAG9 804 aa20.03■□□□□ 0.8
RPUSD4-207ENST00000532800 VWCEQ96DN2 955 aa20.03■□□□□ 0.8
RPUSD4-207ENST00000532800 SCLYQ96I15 445 aa20.03■□□□□ 0.8
RPUSD4-207ENST00000532800 SEZ6LQ9BYH1 1024 aa20.03■□□□□ 0.8
RPUSD4-207ENST00000532800 POLR3EQ9NVU0 708 aa20.03■□□□□ 0.8
RPUSD4-207ENST00000532800 PNMA2Q9UL42 364 aa20.03■□□□□ 0.8
RPUSD4-207ENST00000532800 CHD7Q9P2D1 2997 aa20.03■□□□□ 0.8
RPUSD4-207ENST00000532800 MYO9BQ13459 2157 aa20.02■□□□□ 0.8
RPUSD4-207ENST00000532800 MYH6P13533 1939 aa20.02■□□□□ 0.8
RPUSD4-207ENST00000532800 SCN5AQ14524 2016 aa20.02■□□□□ 0.8
RPUSD4-207ENST00000532800 FGBP02675 491 aa20.02■□□□□ 0.8
RPUSD4-207ENST00000532800 CYP2C9P11712 490 aa20.02■□□□□ 0.8
RPUSD4-207ENST00000532800 CPT1AP50416 773 aa20.02■□□□□ 0.8
RPUSD4-207ENST00000532800 CDC37Q16543 378 aaPredicted RBP20.02■□□□□ 0.8
RPUSD4-207ENST00000532800 DNERQ8NFT8 737 aa20.02■□□□□ 0.8
RPUSD4-207ENST00000532800 TNKSO95271 1327 aa20.02■□□□□ 0.79
RPUSD4-207ENST00000532800 ARIH2O95376 493 aa20.01■□□□□ 0.79
RPUSD4-207ENST00000532800 IQCA1Q86XH1 822 aa20.01■□□□□ 0.79
RPUSD4-207ENST00000532800 SCFD2Q8WU76 684 aa20.01■□□□□ 0.79
RPUSD4-207ENST00000532800 TBC1D5Q92609 795 aa20.01■□□□□ 0.79
RPUSD4-207ENST00000532800 MTG1Q9BT17 334 aaPredicted RBP20.01■□□□□ 0.79
RPUSD4-207ENST00000532800 PRDM12Q9H4Q4 367 aa20.01■□□□□ 0.79
RPUSD4-207ENST00000532800 ADGRF4Q8IZF3 695 aa20■□□□□ 0.79
RPUSD4-207ENST00000532800 ENAHQ8N8S7 591 aaPredicted RBP20■□□□□ 0.79
RPUSD4-207ENST00000532800 MPHOSPH6Q99547 160 aaKnown RBP20■□□□□ 0.79
RPUSD4-207ENST00000532800 IL25Q9H293 177 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms