RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-223ENST00000532793 UPF3AQ9H1J1 476 aaKnown RBP11.35□□□□□ -0.59
PPFIA1-223ENST00000532793 ADD3Q9UEY8 706 aaKnown RBP11.35□□□□□ -0.59
PPFIA1-223ENST00000532793 ANAPC4Q9UJX5 808 aa11.35□□□□□ -0.59
PPFIA1-223ENST00000532793 PNMA2Q9UL42 364 aa11.35□□□□□ -0.59
PPFIA1-223ENST00000532793 PRR12Q9ULL5 1215 aa11.35□□□□□ -0.59
PPFIA1-223ENST00000532793 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.35□□□□□ -0.59
PPFIA1-223ENST00000532793 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.34□□□□□ -0.59
PPFIA1-223ENST00000532793 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.34□□□□□ -0.59
PPFIA1-223ENST00000532793 MYADML2A6NDP7 307 aa11.34□□□□□ -0.59
PPFIA1-223ENST00000532793 ARVCFO00192 962 aa11.34□□□□□ -0.59
PPFIA1-223ENST00000532793 ORC4O43929 436 aa11.34□□□□□ -0.59
PPFIA1-223ENST00000532793 NMT2O60551 498 aa11.34□□□□□ -0.59
PPFIA1-223ENST00000532793 CABYRO75952 493 aa11.34□□□□□ -0.59
PPFIA1-223ENST00000532793 TIMP1P01033 207 aa11.34□□□□□ -0.59
PPFIA1-223ENST00000532793 TOP1P11387 765 aaKnown RBP11.34□□□□□ -0.59
PPFIA1-223ENST00000532793 PCP11498 1178 aaKnown RBP11.34□□□□□ -0.59
PPFIA1-223ENST00000532793 HDAC1Q13547 482 aaPredicted RBP11.34□□□□□ -0.59
PPFIA1-223ENST00000532793 AAMPQ13685 434 aa11.34□□□□□ -0.59
PPFIA1-223ENST00000532793 VPS53Q5VIR6 699 aa11.34□□□□□ -0.59
PPFIA1-223ENST00000532793 MFSD6Q6ZSS7 791 aa11.34□□□□□ -0.59
PPFIA1-223ENST00000532793 TICAM2Q86XR7 235 aa11.34□□□□□ -0.59
PPFIA1-223ENST00000532793 FAM133AQ8N9E0 248 aa11.34□□□□□ -0.59
PPFIA1-223ENST00000532793 GUCD1Q96NT3 240 aa11.34□□□□□ -0.59
PPFIA1-223ENST00000532793 SLC4A5Q9BY07 1137 aa11.34□□□□□ -0.59
PPFIA1-223ENST00000532793 MTIF3Q9H2K0 278 aaKnown RBP11.34□□□□□ -0.59
PPFIA1-223ENST00000532793 RNF41Q9H4P4 317 aaPredicted RBP11.34□□□□□ -0.59
PPFIA1-223ENST00000532793 IL17RBQ9NRM6 502 aa11.34□□□□□ -0.59
PPFIA1-223ENST00000532793 LAMA4Q16363 1823 aa11.34□□□□□ -0.59
PPFIA1-223ENST00000532793 ZNF536O15090 1300 aa11.34□□□□□ -0.59
PPFIA1-223ENST00000532793 SALL3Q9BXA9 1300 aa11.34□□□□□ -0.59
PPFIA1-223ENST00000532793 LCTP09848 1927 aa11.33□□□□□ -0.6
PPFIA1-223ENST00000532793 TMEM265A0A087WTH1 108 aa11.33□□□□□ -0.6
PPFIA1-223ENST00000532793 PTPDC1A2A3K4 754 aa11.33□□□□□ -0.6
PPFIA1-223ENST00000532793 ICAM1P05362 532 aa11.33□□□□□ -0.6
PPFIA1-223ENST00000532793 FOSL2P15408 326 aa11.33□□□□□ -0.6
PPFIA1-223ENST00000532793 ITGB8P26012 769 aa11.33□□□□□ -0.6
PPFIA1-223ENST00000532793 SNAP25P60880 206 aa11.33□□□□□ -0.6
PPFIA1-223ENST00000532793 ALX1Q15699 326 aa11.33□□□□□ -0.6
PPFIA1-223ENST00000532793 IQSEC1Q6DN90 963 aa11.33□□□□□ -0.6
PPFIA1-223ENST00000532793 CCSAPQ6IQ19 270 aaPredicted RBP11.33□□□□□ -0.6
PPFIA1-223ENST00000532793 MFSD5Q6N075 450 aa11.33□□□□□ -0.6
PPFIA1-223ENST00000532793 EEPD1Q7L9B9 569 aa11.33□□□□□ -0.6
PPFIA1-223ENST00000532793 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.33□□□□□ -0.6
PPFIA1-223ENST00000532793 FGD4Q96M96 766 aa11.33□□□□□ -0.6
PPFIA1-223ENST00000532793 CDX2Q99626 313 aaPredicted RBP11.33□□□□□ -0.6
PPFIA1-223ENST00000532793 SEZ6LQ9BYH1 1024 aa11.33□□□□□ -0.6
PPFIA1-223ENST00000532793 PPP1R12CQ9BZL4 782 aa11.33□□□□□ -0.6
PPFIA1-223ENST00000532793 LNPKQ9C0E8 428 aa11.33□□□□□ -0.6
PPFIA1-223ENST00000532793 RWDD1Q9H446 243 aaPredicted RBP11.33□□□□□ -0.6
PPFIA1-223ENST00000532793 INCENPQ9NQS7 918 aa11.33□□□□□ -0.6
PPFIA1-223ENST00000532793 CYP39A1Q9NYL5 469 aa11.33□□□□□ -0.6
PPFIA1-223ENST00000532793 ZMYM6O95789 1325 aa11.33□□□□□ -0.6
PPFIA1-223ENST00000532793 FRMPD2Q68DX3 1309 aaPredicted RBP11.33□□□□□ -0.6
PPFIA1-223ENST00000532793 CCDC171Q6TFL3 1326 aa11.33□□□□□ -0.6
PPFIA1-223ENST00000532793 A0A0D9SFI3 127 aa11.32□□□□□ -0.6
PPFIA1-223ENST00000532793 SOWAHBA6NEL2 793 aa11.32□□□□□ -0.6
PPFIA1-223ENST00000532793 B4DLN1 442 aa11.32□□□□□ -0.6
PPFIA1-223ENST00000532793 DYNC1LI2O43237 492 aaPredicted RBP11.32□□□□□ -0.6
PPFIA1-223ENST00000532793 ADCY6O43306 1168 aa11.32□□□□□ -0.6
PPFIA1-223ENST00000532793 FGAP02671 866 aa11.32□□□□□ -0.6
PPFIA1-223ENST00000532793 HSPD1P10809 573 aaKnown RBP11.32□□□□□ -0.6
PPFIA1-223ENST00000532793 SLC16A2P36021 539 aa11.32□□□□□ -0.6
PPFIA1-223ENST00000532793 MRPL12P52815 198 aaKnown RBP11.32□□□□□ -0.6
PPFIA1-223ENST00000532793 HAND2P61296 217 aa11.32□□□□□ -0.6
PPFIA1-223ENST00000532793 BEX3Q00994 111 aa11.32□□□□□ -0.6
PPFIA1-223ENST00000532793 NMIQ13287 307 aaPredicted RBP11.32□□□□□ -0.6
PPFIA1-223ENST00000532793 FSCN1Q16658 493 aaKnown RBP11.32□□□□□ -0.6
PPFIA1-223ENST00000532793 BRDTQ58F21 947 aaPredicted RBP11.32□□□□□ -0.6
PPFIA1-223ENST00000532793 MUM1L1Q5H9M0 696 aa11.32□□□□□ -0.6
PPFIA1-223ENST00000532793 SYDE2Q5VT97 1194 aa11.32□□□□□ -0.6
PPFIA1-223ENST00000532793 PSRC1Q6PGN9 363 aaPredicted RBP11.32□□□□□ -0.6
PPFIA1-223ENST00000532793 CXCL17Q6UXB2 119 aa11.32□□□□□ -0.6
PPFIA1-223ENST00000532793 KIAA1211Q6ZU35 1233 aa11.32□□□□□ -0.6
PPFIA1-223ENST00000532793 FBXO16Q8IX29 292 aaPredicted RBP11.32□□□□□ -0.6
PPFIA1-223ENST00000532793 MAFAQ8NHW3 353 aaPredicted RBP11.32□□□□□ -0.6
PPFIA1-223ENST00000532793 FAM227BQ96M60 508 aa11.32□□□□□ -0.6
PPFIA1-223ENST00000532793 RANBP17Q9H2T7 1088 aaKnown RBP11.32□□□□□ -0.6
PPFIA1-223ENST00000532793 SEMA6BQ9H3T3 888 aa11.32□□□□□ -0.6
PPFIA1-223ENST00000532793 VTA1Q9NP79 307 aa11.32□□□□□ -0.6
PPFIA1-223ENST00000532793 GPCPD1Q9NPB8 672 aa11.32□□□□□ -0.6
PPFIA1-223ENST00000532793 GPHNQ9NQX3 736 aaPredicted RBP11.32□□□□□ -0.6
PPFIA1-223ENST00000532793 TCP11L1Q9NUJ3 509 aa11.32□□□□□ -0.6
PPFIA1-223ENST00000532793 Q9Y3F1 56 aa11.32□□□□□ -0.6
PPFIA1-223ENST00000532793 RAD50Q92878 1312 aa11.32□□□□□ -0.6
PPFIA1-223ENST00000532793 LOC102724159A0A0B4J2E5 919 aa11.31□□□□□ -0.6
PPFIA1-223ENST00000532793 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.31□□□□□ -0.6
PPFIA1-223ENST00000532793 FOXP2O15409 715 aa11.31□□□□□ -0.6
PPFIA1-223ENST00000532793 ITGA7Q13683 1181 aa11.31□□□□□ -0.6
PPFIA1-223ENST00000532793 PWP2Q15269 919 aaKnown RBP11.31□□□□□ -0.6
PPFIA1-223ENST00000532793 CCDC178Q5BJE1 867 aa11.31□□□□□ -0.6
PPFIA1-223ENST00000532793 AKNAD1Q5T1N1 836 aa11.31□□□□□ -0.6
PPFIA1-223ENST00000532793 B4GALNT3Q6L9W6 998 aa11.31□□□□□ -0.6
PPFIA1-223ENST00000532793 RNF207Q6ZRF8 634 aa11.31□□□□□ -0.6
PPFIA1-223ENST00000532793 IQCA1Q86XH1 822 aa11.31□□□□□ -0.6
PPFIA1-223ENST00000532793 FAM126BQ8IXS8 530 aa11.31□□□□□ -0.6
PPFIA1-223ENST00000532793 MYLIPQ8WY64 445 aa11.31□□□□□ -0.6
PPFIA1-223ENST00000532793 ESR2Q92731 530 aa11.31□□□□□ -0.6
PPFIA1-223ENST00000532793 YTHDC1Q96MU7 727 aaKnown RBP11.31□□□□□ -0.6
PPFIA1-223ENST00000532793 TTC14Q96N46 770 aa11.31□□□□□ -0.6
PPFIA1-223ENST00000532793 TMEM47Q9BQJ4 181 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms