RNA–Protein interactions for RNA: ENST00000530727.5

PTPRC-214, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 1,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-214ENST00000530727 NOL6Q9H6R4 1146 aaKnown RBP5.62□□□□□ -1.51
PTPRC-214ENST00000530727 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.62□□□□□ -1.51
PTPRC-214ENST00000530727 GPR160Q9UJ42 338 aa5.62□□□□□ -1.51
PTPRC-214ENST00000530727 FHOD1Q9Y613 1164 aa5.62□□□□□ -1.51
PTPRC-214ENST00000530727 ANKRD30AQ9BXX3 1397 aa5.62□□□□□ -1.51
PTPRC-214ENST00000530727 DIP2BQ9P265 1576 aa5.62□□□□□ -1.51
PTPRC-214ENST00000530727 TLDC2A0PJX2 215 aa5.62□□□□□ -1.51
PTPRC-214ENST00000530727 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.62□□□□□ -1.51
PTPRC-214ENST00000530727 CBFA2T2O43439 604 aa5.62□□□□□ -1.51
PTPRC-214ENST00000530727 ZNF205O95201 554 aa5.62□□□□□ -1.51
PTPRC-214ENST00000530727 VAV1P15498 845 aa5.62□□□□□ -1.51
PTPRC-214ENST00000530727 DNAJA1P31689 397 aaKnown RBP5.62□□□□□ -1.51
PTPRC-214ENST00000530727 SLC14A2Q15849 920 aa5.62□□□□□ -1.51
PTPRC-214ENST00000530727 TIGD5Q53EQ6 642 aa5.62□□□□□ -1.51
PTPRC-214ENST00000530727 ADAT2Q7Z6V5 191 aaKnown RBP5.62□□□□□ -1.51
PTPRC-214ENST00000530727 FCRL2Q96LA5 508 aaPredicted RBP5.62□□□□□ -1.51
PTPRC-214ENST00000530727 RNF32Q9H0A6 362 aa5.62□□□□□ -1.51
PTPRC-214ENST00000530727 SP110Q9HB58 689 aa5.62□□□□□ -1.51
PTPRC-214ENST00000530727 WHRNQ9P202 907 aa5.62□□□□□ -1.51
PTPRC-214ENST00000530727 SF3B6Q9Y3B4 125 aaKnown RBP5.62□□□□□ -1.51
PTPRC-214ENST00000530727 CD109Q6YHK3 1445 aa5.61□□□□□ -1.51
PTPRC-214ENST00000530727 PPRC1Q5VV67 1664 aaKnown RBP5.61□□□□□ -1.51
PTPRC-214ENST00000530727 KIF13AQ9H1H9 1805 aa5.61□□□□□ -1.51
PTPRC-214ENST00000530727 LOC102724159A0A0B4J2E5 919 aa5.61□□□□□ -1.51
PTPRC-214ENST00000530727 TSPY4P0CV99 314 aa5.61□□□□□ -1.51
PTPRC-214ENST00000530727 TSPY10P0CW01 314 aa5.61□□□□□ -1.51
PTPRC-214ENST00000530727 KIR2DL1P43626 348 aaPredicted RBP5.61□□□□□ -1.51
PTPRC-214ENST00000530727 KIR2DL2P43627 348 aaPredicted RBP5.61□□□□□ -1.51
PTPRC-214ENST00000530727 PPP2R5DQ14738 602 aa5.61□□□□□ -1.51
PTPRC-214ENST00000530727 PWP2Q15269 919 aaKnown RBP5.61□□□□□ -1.51
PTPRC-214ENST00000530727 CCDC144BQ3MJ40 725 aa5.61□□□□□ -1.51
PTPRC-214ENST00000530727 KIAA1211LQ6NV74 962 aa5.61□□□□□ -1.51
PTPRC-214ENST00000530727 CEP128Q6ZU80 1094 aa5.61□□□□□ -1.51
PTPRC-214ENST00000530727 POU5F2Q8N7G0 328 aa5.61□□□□□ -1.51
PTPRC-214ENST00000530727 ADCY4Q8NFM4 1077 aa5.61□□□□□ -1.51
PTPRC-214ENST00000530727 KLHL6Q8WZ60 621 aa5.61□□□□□ -1.51
PTPRC-214ENST00000530727 GPATCH3Q96I76 525 aa5.61□□□□□ -1.51
PTPRC-214ENST00000530727 RTEL1-TNFRSF6BF6WH68 1400 aa5.61□□□□□ -1.51
PTPRC-214ENST00000530727 ANKRD50Q9ULJ7 1429 aa5.61□□□□□ -1.51
PTPRC-214ENST00000530727 CFAP74Q9C0B2 1584 aa5.61□□□□□ -1.51
PTPRC-214ENST00000530727 INO80Q9ULG1 1556 aaPredicted RBP5.61□□□□□ -1.51
PTPRC-214ENST00000530727 SMAD7O15105 426 aaKnown RBP5.6□□□□□ -1.51
PTPRC-214ENST00000530727 FARP2O94887 1054 aaPredicted RBP5.6□□□□□ -1.51
PTPRC-214ENST00000530727 EPHX1P07099 455 aa5.6□□□□□ -1.51
PTPRC-214ENST00000530727 GSTM1P09488 218 aa5.6□□□□□ -1.51
PTPRC-214ENST00000530727 TNNI3KQ59H18 835 aa5.6□□□□□ -1.51
PTPRC-214ENST00000530727 PRR23BQ6ZRT6 265 aa5.6□□□□□ -1.51
PTPRC-214ENST00000530727 HHIPL1Q96JK4 782 aa5.6□□□□□ -1.51
PTPRC-214ENST00000530727 FGD4Q96M96 766 aa5.6□□□□□ -1.51
PTPRC-214ENST00000530727 ZDHHC15Q96MV8 337 aa5.6□□□□□ -1.51
PTPRC-214ENST00000530727 KLHL25Q9H0H3 589 aa5.6□□□□□ -1.51
PTPRC-214ENST00000530727 AP5S1Q9NUS5 200 aa5.6□□□□□ -1.51
PTPRC-214ENST00000530727 ZFYVE16Q7Z3T8 1539 aa5.6□□□□□ -1.51
PTPRC-214ENST00000530727 KDM5DQ9BY66 1539 aa5.6□□□□□ -1.51
PTPRC-214ENST00000530727 PSPNO60542 156 aa5.6□□□□□ -1.51
PTPRC-214ENST00000530727 PPM1BO75688 479 aa5.6□□□□□ -1.51
PTPRC-214ENST00000530727 ADGRL1O94910 1474 aa5.6□□□□□ -1.51
PTPRC-214ENST00000530727 PZPP20742 1482 aa5.6□□□□□ -1.51
PTPRC-214ENST00000530727 GTF2F1P35269 517 aaKnown RBP eCLIP5.6□□□□□ -1.51
PTPRC-214ENST00000530727 KDM5CP41229 1560 aa5.6□□□□□ -1.51
PTPRC-214ENST00000530727 NOP2P46087 812 aaKnown RBP5.6□□□□□ -1.51
PTPRC-214ENST00000530727 NAT16Q8N8M0 369 aa5.6□□□□□ -1.51
PTPRC-214ENST00000530727 NEO1Q92859 1461 aa5.6□□□□□ -1.51
PTPRC-214ENST00000530727 DIRC2Q96SL1 478 aa5.6□□□□□ -1.51
PTPRC-214ENST00000530727 NSUN3Q9H649 340 aaKnown RBP5.6□□□□□ -1.51
PTPRC-214ENST00000530727 KIF15Q9NS87 1388 aa5.6□□□□□ -1.51
PTPRC-214ENST00000530727 ACTR10Q9NZ32 417 aa5.6□□□□□ -1.51
PTPRC-214ENST00000530727 TNFRSF10DQ9UBN6 386 aa5.6□□□□□ -1.51
PTPRC-214ENST00000530727 KIDINS220Q9ULH0 1771 aa5.6□□□□□ -1.51
PTPRC-214ENST00000530727 DIS3Q9Y2L1 958 aaKnown RBP5.6□□□□□ -1.51
PTPRC-214ENST00000530727 SUGT1Q9Y2Z0 365 aa5.6□□□□□ -1.51
PTPRC-214ENST00000530727 RIPOR2Q9Y4F9 1068 aa5.6□□□□□ -1.51
PTPRC-214ENST00000530727 SCAPERQ9BY12 1400 aa5.59□□□□□ -1.51
PTPRC-214ENST00000530727 A0A087WZG4 1122 aa5.59□□□□□ -1.51
PTPRC-214ENST00000530727 FGRP09769 529 aa5.59□□□□□ -1.51
PTPRC-214ENST00000530727 POU4F1Q01851 419 aa5.59□□□□□ -1.51
PTPRC-214ENST00000530727 SNX17Q15036 470 aa5.59□□□□□ -1.51
PTPRC-214ENST00000530727 ZNF648Q5T619 568 aaPredicted RBP5.59□□□□□ -1.51
PTPRC-214ENST00000530727 EGFLAMQ63HQ2 1017 aa5.59□□□□□ -1.51
PTPRC-214ENST00000530727 LARP1BQ659C4 914 aaKnown RBP5.59□□□□□ -1.51
PTPRC-214ENST00000530727 AFAP1Q8N556 730 aa5.59□□□□□ -1.51
PTPRC-214ENST00000530727 SLC12A9Q9BXP2 914 aa5.59□□□□□ -1.51
PTPRC-214ENST00000530727 SLC6A17Q9H1V8 727 aa5.59□□□□□ -1.51
PTPRC-214ENST00000530727 ERVK13-1Q9NX77 482 aa5.59□□□□□ -1.51
PTPRC-214ENST00000530727 GPR55Q9Y2T6 319 aaPredicted RBP5.59□□□□□ -1.51
PTPRC-214ENST00000530727 RICTORQ6R327 1708 aa5.59□□□□□ -1.51
PTPRC-214ENST00000530727 UNC13BO14795 1591 aa5.59□□□□□ -1.52
PTPRC-214ENST00000530727 DUOX2Q9NRD8 1548 aa5.59□□□□□ -1.52
PTPRC-214ENST00000530727 MAGI2Q86UL8 1455 aa5.59□□□□□ -1.52
PTPRC-214ENST00000530727 NRDCO43847 1150 aa5.58□□□□□ -1.52
PTPRC-214ENST00000530727 CD3EP07766 207 aa5.58□□□□□ -1.52
PTPRC-214ENST00000530727 ATP2B1P20020 1258 aa5.58□□□□□ -1.52
PTPRC-214ENST00000530727 ETFBP38117 255 aa5.58□□□□□ -1.52
PTPRC-214ENST00000530727 RTP1P59025 263 aa5.58□□□□□ -1.52
PTPRC-214ENST00000530727 RTP2Q5QGT7 225 aa5.58□□□□□ -1.52
PTPRC-214ENST00000530727 MCF2L2Q86YR7 1114 aa5.58□□□□□ -1.52
PTPRC-214ENST00000530727 KSR1Q8IVT5 923 aa5.58□□□□□ -1.52
PTPRC-214ENST00000530727 SIRT2Q8IXJ6 389 aa5.58□□□□□ -1.52
PTPRC-214ENST00000530727 MPHOSPH9Q99550 1183 aa5.58□□□□□ -1.52
PTPRC-214ENST00000530727 SLC38A3Q99624 504 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms